FFCP PHASE1:Hg19::chr13:113344371..113344404,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:113344371..113344404,+ to FFCP PHASE1:Hg19::chr13:113344371..113344404,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23250 | |EntrezGene=23250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13552 | |HGNC=13552 | ||
|TSSclassifier=strong | |||
|UniProt=P98196,E9PEJ6,Q659C3,Q6PJ25 | |UniProt=P98196,E9PEJ6,Q659C3,Q6PJ25 | ||
|association_with_transcript=-238bp_to_ENST00000283558,ENST00000375630,ENST00000375645,ENST00000487903,NM_015205,NM_032189,uc001vsi.3,uc001vsj.3_5end | |||
|cluster_id=chr13:113344371..113344404,+ | |||
|coexpression_cluster_id=C3354 | |||
|description=CAGE_peak_6_at_ATP11A_5end | |||
|id=chr13:113344371..113344404,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.28e-15!76;CL:0000763!4.48e-13!112;CL:0000049!4.48e-13!112;CL:0002057!6.09e-11!42;CL:0002194!8.14e-11!63;CL:0000576!8.14e-11!63;CL:0000040!8.14e-11!63;CL:0000559!8.14e-11!63;CL:0000557!1.80e-10!71;CL:0000839!3.90e-10!70;CL:0002009!1.49e-09!65;CL:0000860!3.44e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000766;6.05e-09;69!CL:0000473;2.97e-08;39!CL:0000234;2.97e-08;39!CL:0000576;2.68e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.76e-18,72;CL:0000763,1.26e-15,108;CL:0000049,1.26e-15,108;CL:0000473,8.59e-15,48;CL:0000234,8.59e-15,48;CL:0000557,5.30e-13,67;CL:0002194,6.61e-13,59;CL:0000576,6.61e-13,59;CL:0000040,6.61e-13,59;CL:0000559,6.61e-13,59;CL:0000839,1.88e-12,66;CL:0002009,9.32e-12,61;CL:0000860,1.38e-11,42;CL:0002057,1.38e-11,42;CL:0000037,9.63e-08,168;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000738,2.54e-07,136;CL:0000988,4.53e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.78e-09!115;UBERON:0002193!5.61e-09!112;UBERON:0001474!2.53e-08!86;UBERON:0002390!2.76e-08!102;UBERON:0003061!2.76e-08!102;UBERON:0002371!3.33e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.51e-11,108;UBERON:0002405,5.57e-11,93;UBERON:0002390,1.40e-10,98;UBERON:0003061,1.40e-10,98;UBERON:0001474,2.45e-10,82;UBERON:0002371,3.19e-10,76;UBERON:0004765,3.32e-08,90 | |||
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| ||
|short_description=p6@ATP11A | |||
}} | }} |
Latest revision as of 14:47, 16 September 2015
Short description: | p6@ATP11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATP11A_5end |
Coexpression cluster: | C3354_gall_bronchogenic_Eosinophils_Neutrophils_lung_CD14_granulocyte |
Association with transcript: | -238bp_to_ENST00000283558, ENST00000375630, ENST00000375645, ENST00000487903, NM_015205, NM_032189, uc001vsi.3, uc001vsj.3_5end |
EntrezGene: | ATP11A |
HGNC: | 13552 |
UniProt: | P98196E9PEJ6Q659C3Q6PJ25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.76e-18 | 72 |
myeloid cell | 1.26e-15 | 108 |
common myeloid progenitor | 1.26e-15 | 108 |
defensive cell | 8.59e-15 | 48 |
phagocyte | 8.59e-15 | 48 |
granulocyte monocyte progenitor cell | 5.30e-13 | 67 |
monopoietic cell | 6.61e-13 | 59 |
monocyte | 6.61e-13 | 59 |
monoblast | 6.61e-13 | 59 |
promonocyte | 6.61e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.88e-12 | 66 |
macrophage dendritic cell progenitor | 9.32e-12 | 61 |
classical monocyte | 1.38e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-11 | 42 |
hematopoietic stem cell | 9.63e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
leukocyte | 2.54e-07 | 136 |
hematopoietic cell | 4.53e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.51e-11 | 108 |
immune system | 5.57e-11 | 93 |
hematopoietic system | 1.40e-10 | 98 |
blood island | 1.40e-10 | 98 |
bone element | 2.45e-10 | 82 |
bone marrow | 3.19e-10 | 76 |
skeletal element | 3.32e-08 | 90 |