FFCP PHASE1:Hg19::chr3:169487366..169487405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84517 | |EntrezGene=84517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYD9 | |UniProt=Q9BYD9 | ||
|association_with_transcript=277bp_to_ENST00000330368,NM_032487,uc003ffs.1_5end | |association_with_transcript=277bp_to_ENST00000330368,NM_032487,uc003ffs.1_5end | ||
|cluster_id=chr3:169487366..169487405,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_ARPM1_5end | |description=CAGE_peak_2_at_ARPM1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.36e-11!180;CL:0000183!2.49e-08!59;CL:0000680!3.28e-07!57;CL:0000056!3.28e-07!57;CL:0000355!3.28e-07!57;CL:0000393!4.55e-07!60;CL:0000211!4.55e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.36e-11!180;CL:0000183!2.49e-08!59;CL:0000680!3.28e-07!57;CL:0000056!3.28e-07!57;CL:0000355!3.28e-07!57;CL:0000393!4.55e-07!60;CL:0000211!4.55e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.36e-11;4!CL:0002222;1.36e-11;4!CL:0002224;1.36e-11;4!CL:0000708;3.83e-09;3!CL:0002559;6.23e-09;5!CL:0002590;1.00e-08;3!CL:0000064;1.36e-08;3!CL:0000067;1.36e-08;3!CL:0005012;1.36e-08;3!CL:0002304;1.36e-08;3 | |ontology_enrichment_celltype_v019=CL:0000306;1.36e-11;4!CL:0002222;1.36e-11;4!CL:0002224;1.36e-11;4!CL:0000708;3.83e-09;3!CL:0002559;6.23e-09;5!CL:0002590;1.00e-08;3!CL:0000064;1.36e-08;3!CL:0000067;1.36e-08;3!CL:0005012;1.36e-08;3!CL:0002304;1.36e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.64e-11,4;CL:0002222,1.64e-11,4;CL:0002224,1.64e-11,4;CL:0000708,1.65e-09,3;CL:0002559,4.64e-09,5;CL:0002590,4.91e-09,3;CL:0000064,7.15e-09,3;CL:0000067,7.15e-09,3;CL:0005012,7.15e-09,3;CL:0002304,7.15e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.44e-08;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.44e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.66e-11!365;UBERON:0000119!5.90e-10!312;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0000483!5.48e-09!309;UBERON:0005256!6.17e-09!143;UBERON:0004290!1.04e-08!70;UBERON:0000481!1.50e-08!347;UBERON:0000486!3.25e-08!82;UBERON:0002200!4.06e-08!11;UBERON:0006876!4.06e-08!11;UBERON:0002100!5.17e-08!216;UBERON:0000064!7.37e-08!219;UBERON:0000468!1.42e-07!659;UBERON:0001134!3.46e-07!61;UBERON:0002036!3.46e-07!61;UBERON:0003082!3.46e-07!61;UBERON:0002385!8.22e-07!63;UBERON:0001015!8.22e-07!63;UBERON:0000383!8.22e-07!63 | |ontology_enrichment_uberon=UBERON:0000475!7.66e-11!365;UBERON:0000119!5.90e-10!312;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0000483!5.48e-09!309;UBERON:0005256!6.17e-09!143;UBERON:0004290!1.04e-08!70;UBERON:0000481!1.50e-08!347;UBERON:0000486!3.25e-08!82;UBERON:0002200!4.06e-08!11;UBERON:0006876!4.06e-08!11;UBERON:0002100!5.17e-08!216;UBERON:0000064!7.37e-08!219;UBERON:0000468!1.42e-07!659;UBERON:0001134!3.46e-07!61;UBERON:0002036!3.46e-07!61;UBERON:0003082!3.46e-07!61;UBERON:0002385!8.22e-07!63;UBERON:0001015!8.22e-07!63;UBERON:0000383!8.22e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.37e-18;11!UBERON:0007625;1.37e-14;11!UBERON:0005284;1.81e-13;5!UBERON:0010077;1.36e-11;4!UBERON:0005389;1.36e-11;4!UBERON:0000484;1.36e-11;4!UBERON:0000965;1.36e-11;4!UBERON:0001803;1.36e-11;4!UBERON:0010371;1.59e-11;31!UBERON:0001801;3.89e-11;14!UBERON:0000488;9.11e-11;4!UBERON:0003210;3.83e-09;3!UBERON:0002073;6.23e-09;5!UBERON:0002104;1.03e-08;21!UBERON:0001456;1.03e-08;21!UBERON:0001778;1.36e-08;3!UBERON:0001775;1.36e-08;3!UBERON:0000019;8.11e-08;19!UBERON:0000047;8.11e-08;19!UBERON:0004088;8.11e-08;19!UBERON:0010230;8.11e-08;19!UBERON:0001032;2.10e-07;24!UBERON:0004456;2.10e-07;24!UBERON:0000970;2.35e-07;20!UBERON:0002203;3.60e-07;6!UBERON:0001768;3.60e-07;6!UBERON:0002200;3.60e-07;6!UBERON:0002037;6.50e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0006876;4.37e-18;11!UBERON:0007625;1.37e-14;11!UBERON:0005284;1.81e-13;5!UBERON:0010077;1.36e-11;4!UBERON:0005389;1.36e-11;4!UBERON:0000484;1.36e-11;4!UBERON:0000965;1.36e-11;4!UBERON:0001803;1.36e-11;4!UBERON:0010371;1.59e-11;31!UBERON:0001801;3.89e-11;14!UBERON:0000488;9.11e-11;4!UBERON:0003210;3.83e-09;3!UBERON:0002073;6.23e-09;5!UBERON:0002104;1.03e-08;21!UBERON:0001456;1.03e-08;21!UBERON:0001778;1.36e-08;3!UBERON:0001775;1.36e-08;3!UBERON:0000019;8.11e-08;19!UBERON:0000047;8.11e-08;19!UBERON:0004088;8.11e-08;19!UBERON:0010230;8.11e-08;19!UBERON:0001032;2.10e-07;24!UBERON:0004456;2.10e-07;24!UBERON:0000970;2.35e-07;20!UBERON:0002203;3.60e-07;6!UBERON:0001768;3.60e-07;6!UBERON:0002200;3.60e-07;6!UBERON:0002037;6.50e-07;6 | ||
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| ||
|short_description=p2@ARPM1 | |short_description=p2@ARPM1 | ||
}} | }} |
Latest revision as of 14:53, 16 September 2015
Short description: | p2@ARPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARPM1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 277bp_to_ENST00000330368, NM_032487, uc003ffs.1_5end |
EntrezGene: | ARPM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.64e-11 | 4 |
vertebrate lens cell | 1.64e-11 | 4 |
lens epithelial cell | 1.64e-11 | 4 |
leptomeningeal cell | 1.65e-09 | 3 |
hair follicle cell | 4.64e-09 | 5 |
smooth muscle cell of the brain vasculature | 4.91e-09 | 3 |
ciliated cell | 7.15e-09 | 3 |
ciliated epithelial cell | 7.15e-09 | 3 |
multi-ciliated epithelial cell | 7.15e-09 | 3 |
non-pigmented ciliary epithelial cell | 7.15e-09 | 3 |