FFCP PHASE1:Hg19::chr19:18392894..18392911,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18392894..18392911,+ to FFCP PHASE1:Hg19::chr19:18392894..18392911,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100422833 | |EntrezGene=100422833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38226 | |HGNC=38226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_NR_036155_5end | |||
|cluster_id=chr19:18392894..18392911,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_MIR3188_5end | |||
|id=chr19:18392894..18392911,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.65e-21!45;CL:0002057!4.14e-20!42;CL:0000738!2.72e-19!140;CL:0000037!1.51e-18!172;CL:0000566!1.51e-18!172;CL:0000988!1.63e-17!182;CL:0002031!3.79e-17!124;CL:0002032!1.05e-16!165;CL:0000837!1.05e-16!165;CL:0002087!3.18e-15!119;CL:0000766!6.92e-15!76;CL:0000557!1.49e-14!71;CL:0000839!2.70e-13!70;CL:0000763!6.24e-13!112;CL:0000049!6.24e-13!112;CL:0002009!3.70e-12!65;CL:0002194!2.01e-11!63;CL:0000576!2.01e-11!63;CL:0000040!2.01e-11!63;CL:0000559!2.01e-11!63;CL:0002320!9.01e-09!365;CL:0000134!1.44e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-16;33!CL:0002057;1.24e-16;33!CL:0000576;6.05e-12;48!CL:0000473;1.42e-10;39!CL:0000234;1.42e-10;39!CL:0000766;3.92e-09;69!CL:0002087;9.28e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.41e-23,42;CL:0002057,8.41e-23,42;CL:0000738,3.64e-21,136;CL:0000037,1.39e-19,168;CL:0000988,7.76e-19,177;CL:0002031,3.55e-18,120;CL:0000473,3.96e-18,48;CL:0000234,3.96e-18,48;CL:0002032,1.59e-17,161;CL:0000837,1.59e-17,161;CL:0000766,2.37e-17,72;CL:0000557,1.05e-16,67;CL:0002087,3.53e-16,115;CL:0000839,7.38e-15,66;CL:0000763,3.17e-14,108;CL:0000049,3.17e-14,108;CL:0002009,6.47e-14,61;CL:0002194,4.66e-13,59;CL:0000576,4.66e-13,59;CL:0000040,4.66e-13,59;CL:0000559,4.66e-13,59;CL:0002320,1.21e-08,361;CL:0000134,1.77e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-14!102;UBERON:0003061!1.35e-14!102;UBERON:0002371!3.70e-14!80;UBERON:0002405!1.30e-12!115;UBERON:0001474!1.64e-12!86;UBERON:0002193!4.45e-12!112;UBERON:0004765!2.97e-09!101;UBERON:0001434!2.97e-09!101;UBERON:0002384!4.84e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-16,76;UBERON:0002390,2.18e-16,98;UBERON:0003061,2.18e-16,98;UBERON:0004765,1.98e-15,90;UBERON:0001474,9.91e-15,82;UBERON:0002193,7.35e-14,108;UBERON:0002405,2.44e-13,93;UBERON:0001434,1.66e-12,100;UBERON:0002384,5.59e-08,371 | |||
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| ||
|short_description=p1@MIR3188 | |||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p1@MIR3188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3188_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 7bp_to_NR_036155_5end |
EntrezGene: | MIR3188 |
HGNC: | 38226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.41e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-23 | 42 |
leukocyte | 3.64e-21 | 136 |
hematopoietic stem cell | 1.39e-19 | 168 |
hematopoietic cell | 7.76e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 3.55e-18 | 120 |
defensive cell | 3.96e-18 | 48 |
phagocyte | 3.96e-18 | 48 |
hematopoietic oligopotent progenitor cell | 1.59e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-17 | 161 |
myeloid leukocyte | 2.37e-17 | 72 |
granulocyte monocyte progenitor cell | 1.05e-16 | 67 |
nongranular leukocyte | 3.53e-16 | 115 |
myeloid lineage restricted progenitor cell | 7.38e-15 | 66 |
myeloid cell | 3.17e-14 | 108 |
common myeloid progenitor | 3.17e-14 | 108 |
macrophage dendritic cell progenitor | 6.47e-14 | 61 |
monopoietic cell | 4.66e-13 | 59 |
monocyte | 4.66e-13 | 59 |
monoblast | 4.66e-13 | 59 |
promonocyte | 4.66e-13 | 59 |
connective tissue cell | 1.21e-08 | 361 |
mesenchymal cell | 1.77e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-16 | 76 |
hematopoietic system | 2.18e-16 | 98 |
blood island | 2.18e-16 | 98 |
skeletal element | 1.98e-15 | 90 |
bone element | 9.91e-15 | 82 |
hemolymphoid system | 7.35e-14 | 108 |
immune system | 2.44e-13 | 93 |
skeletal system | 1.66e-12 | 100 |
connective tissue | 5.59e-08 | 371 |