FFCP PHASE1:Hg19::chr9:140064092..140064112,-: Difference between revisions
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|id=chr9:140064092..140064112,-
|short_description=p3@MIR3621
|description=CAGE_peak_3_at_MIR3621_5end
|association_with_transcript=-370bp_to_NR_037416_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100500811 | |EntrezGene=100500811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38930 | |HGNC=38930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-370bp_to_NR_037416_5end | |||
|cluster_id=chr9:140064092..140064112,- | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_3_at_MIR3621_5end | |||
|id=chr9:140064092..140064112,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.08e-21;3!CL:0000785;3.45e-08;1!CL:0000819;3.45e-08;1!CL:0000313;7.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.05e-21,3;CL:0000819,3.58e-08,1;CL:0000313,8.12e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.17e-10;3!UBERON:0006298;1.65e-08;1!UBERON:0008801;1.90e-08;1!UBERON:0008425;2.43e-08;1!UBERON:0005754;2.70e-08;1!UBERON:0000358;3.45e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.12e-16!106;DOID:0050687!2.88e-13!143;DOID:162!9.11e-11!235;DOID:14566!3.37e-10!239;DOID:5093!4.98e-08!4;DOID:1612!4.98e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.62e-27;4!DOID:1612;4.62e-27;4!DOID:0060073;3.45e-08;1!DOID:8675;3.45e-08;1!DOID:2152;7.33e-08;1!DOID:12603;7.33e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.52e-27,4;DOID:1612,2.52e-27,4;DOID:0060073,3.58e-08,1;DOID:8675,3.58e-08,1;DOID:12603,4.40e-08,1;DOID:2152,8.12e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.49e-08!129;UBERON:0004185!1.49e-08!129;UBERON:0001004!1.55e-08!72;UBERON:0001041!2.83e-08!98;UBERON:0001557!2.24e-07!19;UBERON:0000065!3.87e-07!53;UBERON:0000072!4.74e-07!46;UBERON:0001007!4.83e-07!155;UBERON:0001555!4.83e-07!155;UBERON:0007026!4.83e-07!155;UBERON:0000077!7.65e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.00e-15;2!UBERON:0001044;2.96e-11;6!UBERON:0003293;2.96e-11;6!UBERON:0003294;2.96e-11;6!UBERON:0010047;2.96e-11;6!UBERON:0003408;2.96e-11;6!UBERON:0000167;2.96e-11;6!UBERON:0000310;5.98e-11;10!UBERON:0001443;5.76e-10;11!UBERON:0006947;6.13e-10;3!UBERON:0004054;6.13e-10;3!UBERON:0001736;1.65e-08;1!UBERON:0001831;1.90e-08;1!UBERON:0001567;1.90e-08;1!UBERON:0000998;2.70e-08;1!UBERON:0006868;2.70e-08;1!UBERON:0001000;7.33e-08;1!UBERON:0004911;7.33e-08;1!UBERON:0005352;7.33e-08;1!UBERON:0005904;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.00e-15,2;UBERON:0003408,2.32e-11,10;UBERON:0001044,2.97e-11,6;UBERON:0003293,2.97e-11,6;UBERON:0003294,2.97e-11,6;UBERON:0010047,2.97e-11,6;UBERON:0000167,2.97e-11,6;UBERON:0000310,4.74e-11,10;UBERON:0001443,4.66e-10,11;UBERON:0006947,6.00e-10,3;UBERON:0004054,6.00e-10,3;UBERON:0001736,1.65e-08,1;UBERON:0006298,1.65e-08,1;UBERON:0001831,1.91e-08,1;UBERON:0001567,1.91e-08,1;UBERON:0008801,1.91e-08,1;UBERON:0000998,2.71e-08,1;UBERON:0006868,2.71e-08,1;UBERON:0001000,7.10e-08,1;UBERON:0005352,7.10e-08,1;UBERON:0004911,8.12e-08,1;UBERON:0005904,1.14e-07,4 | |||
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| ||
|short_description=p3@MIR3621 | |||
}} | }} |
Latest revision as of 16:07, 16 September 2015
Short description: | p3@MIR3621 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR3621_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | -370bp_to_NR_037416_5end |
EntrezGene: | MIR3621 |
HGNC: | 38930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.05e-21 | 3 |
B-1 B cell | 3.58e-08 | 1 |
serous secreting cell | 8.12e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.00e-15 | 2 |
gland of gut | 2.32e-11 | 10 |
saliva-secreting gland | 2.97e-11 | 6 |
gland of oral region | 2.97e-11 | 6 |
gland of foregut | 2.97e-11 | 6 |
oral gland | 2.97e-11 | 6 |
oral cavity | 2.97e-11 | 6 |
breast | 4.74e-11 | 10 |
chest | 4.66e-10 | 11 |
male genital duct | 6.00e-10 | 3 |
internal male genitalia | 6.00e-10 | 3 |
submandibular gland | 1.65e-08 | 1 |
submandibular gland primordium | 1.65e-08 | 1 |
parotid gland | 1.91e-08 | 1 |
cheek | 1.91e-08 | 1 |
parotid gland primordium | 1.91e-08 | 1 |
seminal vesicle | 2.71e-08 | 1 |
seminal fluid secreting gland | 2.71e-08 | 1 |
vas deferens | 7.10e-08 | 1 |
spermatic cord | 7.10e-08 | 1 |
epithelium of female gonad | 8.12e-08 | 1 |
duct of male reproductive system | 1.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.52e-27 | 4 |
breast cancer | 2.52e-27 | 4 |
lymphatic system cancer | 3.58e-08 | 1 |
lymphosarcoma | 3.58e-08 | 1 |
acute leukemia | 4.40e-08 | 1 |
ovary epithelial cancer | 8.12e-08 | 1 |