FFCP PHASE1:Hg19::chr5:159846066..159846095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10569 | |EntrezGene=10569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16939 | |HGNC=16939 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGM7 | |UniProt=E5RGM7 | ||
|association_with_transcript=0bp_to_ENST00000518268,ENST00000519349,ENST00000520664,ENST00000521190_5end | |association_with_transcript=0bp_to_ENST00000518268,ENST00000519349,ENST00000520664,ENST00000521190_5end | ||
|cluster_id=chr5:159846066..159846095,- | |||
|description=CAGE_peak_1_at_SLU7_5end | |description=CAGE_peak_1_at_SLU7_5end | ||
|id=chr5:159846066..159846095,- | |id=chr5:159846066..159846095,- | ||
|ontology_enrichment_celltype=CL:0000738!6.00e-26!140;CL:0000766!1.27e-22!76;CL:0000860!4.06e-22!45;CL:0002031!4.88e-22!124;CL:0002057!1.04e-21!42;CL:0000037!9.71e-21!172;CL:0000566!9.71e-21!172;CL:0002087!1.43e-20!119;CL:0000839!6.76e-20!70;CL:0002032!1.68e-19!165;CL:0000837!1.68e-19!165;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000557!1.05e-17!71;CL:0002009!1.49e-17!65;CL:0000988!1.58e-17!182;CL:0000763!1.12e-15!112;CL:0000049!1.12e-15!112 | |ontology_enrichment_celltype=CL:0000738!6.00e-26!140;CL:0000766!1.27e-22!76;CL:0000860!4.06e-22!45;CL:0002031!4.88e-22!124;CL:0002057!1.04e-21!42;CL:0000037!9.71e-21!172;CL:0000566!9.71e-21!172;CL:0002087!1.43e-20!119;CL:0000839!6.76e-20!70;CL:0002032!1.68e-19!165;CL:0000837!1.68e-19!165;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000557!1.05e-17!71;CL:0002009!1.49e-17!65;CL:0000988!1.58e-17!182;CL:0000763!1.12e-15!112;CL:0000049!1.12e-15!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-17;33!CL:0002057;2.57e-17;33!CL:0000576;1.33e-14;48!CL:0000473;1.72e-11;39!CL:0000234;1.72e-11;39!CL:0000766;8.19e-11;69!CL:0002087;6.11e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;2.57e-17;33!CL:0002057;2.57e-17;33!CL:0000576;1.33e-14;48!CL:0000473;1.72e-11;39!CL:0000234;1.72e-11;39!CL:0000766;8.19e-11;69!CL:0002087;6.11e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.13e-25,136;CL:0000766,2.86e-22,72;CL:0000860,1.04e-21,42;CL:0002057,1.04e-21,42;CL:0002031,1.63e-21,120;CL:0000037,3.63e-20,168;CL:0002087,4.70e-20,115;CL:0000839,1.54e-19,66;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000473,1.16e-17,48;CL:0000234,1.16e-17,48;CL:0000988,1.64e-17,177;CL:0002194,2.29e-17,59;CL:0000576,2.29e-17,59;CL:0000040,2.29e-17,59;CL:0000559,2.29e-17,59;CL:0000557,2.62e-17,67;CL:0002009,3.47e-17,61;CL:0000763,3.56e-15,108;CL:0000049,3.56e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.04e-16;42 | |ontology_enrichment_development_v019=CL:0002057;6.04e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-18!102;UBERON:0003061!1.25e-18!102;UBERON:0002193!5.42e-15!112;UBERON:0001474!9.61e-15!86;UBERON:0007023!1.16e-14!115;UBERON:0002371!1.50e-14!80;UBERON:0004765!2.69e-12!101;UBERON:0001434!2.69e-12!101;UBERON:0002405!5.55e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.25e-18!102;UBERON:0003061!1.25e-18!102;UBERON:0002193!5.42e-15!112;UBERON:0001474!9.61e-15!86;UBERON:0007023!1.16e-14!115;UBERON:0002371!1.50e-14!80;UBERON:0004765!2.69e-12!101;UBERON:0001434!2.69e-12!101;UBERON:0002405!5.55e-08!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.85e-18,98;UBERON:0003061,3.85e-18,98;UBERON:0002193,1.72e-14,108;UBERON:0001474,2.83e-14,82;UBERON:0007023,3.22e-14,114;UBERON:0002371,4.30e-14,76;UBERON:0004765,1.14e-13,90;UBERON:0001434,1.39e-11,100;UBERON:0002405,1.12e-10,93 | |||
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| ||
|short_description=p1@SLU7 | |short_description=p1@SLU7 | ||
}} | }} |
Latest revision as of 16:17, 16 September 2015
Short description: | p1@SLU7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLU7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518268, ENST00000519349, ENST00000520664, ENST00000521190_5end |
EntrezGene: | SLU7 |
HGNC: | 16939 |
UniProt: | E5RGM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.13e-25 | 136 |
myeloid leukocyte | 2.86e-22 | 72 |
classical monocyte | 1.04e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-21 | 42 |
hematopoietic lineage restricted progenitor cell | 1.63e-21 | 120 |
hematopoietic stem cell | 3.63e-20 | 168 |
nongranular leukocyte | 4.70e-20 | 115 |
myeloid lineage restricted progenitor cell | 1.54e-19 | 66 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
defensive cell | 1.16e-17 | 48 |
phagocyte | 1.16e-17 | 48 |
hematopoietic cell | 1.64e-17 | 177 |
monopoietic cell | 2.29e-17 | 59 |
monocyte | 2.29e-17 | 59 |
monoblast | 2.29e-17 | 59 |
promonocyte | 2.29e-17 | 59 |
granulocyte monocyte progenitor cell | 2.62e-17 | 67 |
macrophage dendritic cell progenitor | 3.47e-17 | 61 |
myeloid cell | 3.56e-15 | 108 |
common myeloid progenitor | 3.56e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.85e-18 | 98 |
blood island | 3.85e-18 | 98 |
hemolymphoid system | 1.72e-14 | 108 |
bone element | 2.83e-14 | 82 |
adult organism | 3.22e-14 | 114 |
bone marrow | 4.30e-14 | 76 |
skeletal element | 1.14e-13 | 90 |
skeletal system | 1.39e-11 | 100 |
immune system | 1.12e-10 | 93 |