FFCP PHASE1:Hg19::chr1:24018269..24018274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6135 | |EntrezGene=6135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10301 | |HGNC=10301 | ||
|TSSclassifier=strong | |||
|UniProt=P62913,Q5VVD0 | |UniProt=P62913,Q5VVD0 | ||
|association_with_transcript=0bp_to_ENST00000374550,NM_000975,NM_001199802_5end | |association_with_transcript=0bp_to_ENST00000374550,NM_000975,NM_001199802_5end | ||
|cluster_id=chr1:24018269..24018274,+ | |||
|coexpression_cluster_id=C1162 | |coexpression_cluster_id=C1162 | ||
|description=CAGE_peak_2_at_RPL11_5end | |description=CAGE_peak_2_at_RPL11_5end | ||
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|ontology_enrichment_celltype=CL:0000548!1.28e-28!679;CL:0000004!1.28e-28!679;CL:0000255!1.28e-28!679;CL:0000012!1.32e-28!682;CL:0000003!2.32e-16!722;CL:0002321!1.54e-15!248;CL:0000220!2.24e-15!246;CL:0000066!4.03e-15!254;CL:0000144!9.17e-15!625;CL:0000055!3.32e-11!180;CL:0002371!1.26e-10!591;CL:0000063!1.66e-10!578;CL:0000222!2.31e-09!119;CL:0000393!7.05e-09!60;CL:0000211!7.05e-09!60;CL:0000680!9.24e-09!57;CL:0000056!9.24e-09!57;CL:0000355!9.24e-09!57;CL:0000187!6.10e-08!54;CL:0000076!3.68e-07!62 | |ontology_enrichment_celltype=CL:0000548!1.28e-28!679;CL:0000004!1.28e-28!679;CL:0000255!1.28e-28!679;CL:0000012!1.32e-28!682;CL:0000003!2.32e-16!722;CL:0002321!1.54e-15!248;CL:0000220!2.24e-15!246;CL:0000066!4.03e-15!254;CL:0000144!9.17e-15!625;CL:0000055!3.32e-11!180;CL:0002371!1.26e-10!591;CL:0000063!1.66e-10!578;CL:0000222!2.31e-09!119;CL:0000393!7.05e-09!60;CL:0000211!7.05e-09!60;CL:0000680!9.24e-09!57;CL:0000056!9.24e-09!57;CL:0000355!9.24e-09!57;CL:0000187!6.10e-08!54;CL:0000076!3.68e-07!62 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.44e-16,250;CL:0000066,2.90e-15,253;CL:0000222,8.28e-10,121;CL:0000393,5.20e-09,61;CL:0000211,5.20e-09,61;CL:0000680,6.84e-09,58;CL:0000056,6.84e-09,58;CL:0000355,6.84e-09,58;CL:0000187,4.55e-08,55;CL:0000076,2.19e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.68e-23!239;DOID:162!3.30e-22!235;DOID:0050686!5.54e-11!137;DOID:0050687!1.70e-10!143;DOID:305!1.09e-09!106;DOID:2531!1.24e-07!51;DOID:0060083!1.24e-07!51 | |ontology_enrichment_disease=DOID:14566!1.68e-23!239;DOID:162!3.30e-22!235;DOID:0050686!5.54e-11!137;DOID:0050687!1.70e-10!143;DOID:305!1.09e-09!106;DOID:2531!1.24e-07!51;DOID:0060083!1.24e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,1.57e-23,239;DOID:162,3.10e-22,235;DOID:0050686,5.74e-11,137;DOID:0050687,1.92e-10,143;DOID:305,1.26e-09,106;DOID:2531,1.02e-07,51;DOID:0060083,1.02e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.12e-11!83;UBERON:0002329!3.12e-11!83;UBERON:0003077!3.12e-11!83;UBERON:0003059!3.12e-11!83;UBERON:0007282!3.12e-11!83;UBERON:0009618!3.12e-11!83;UBERON:0007285!3.12e-11!83;UBERON:0004290!1.51e-10!70;UBERON:0000486!1.71e-10!82;UBERON:0003104!3.96e-10!238;UBERON:0009142!3.96e-10!238;UBERON:0000490!1.74e-08!138;UBERON:0001134!4.63e-08!61;UBERON:0002036!4.63e-08!61;UBERON:0003082!4.63e-08!61;UBERON:0005256!3.19e-07!143;UBERON:0002385!4.26e-07!63;UBERON:0001015!4.26e-07!63;UBERON:0000383!4.26e-07!63;UBERON:0002100!5.07e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!3.12e-11!83;UBERON:0002329!3.12e-11!83;UBERON:0003077!3.12e-11!83;UBERON:0003059!3.12e-11!83;UBERON:0007282!3.12e-11!83;UBERON:0009618!3.12e-11!83;UBERON:0007285!3.12e-11!83;UBERON:0004290!1.51e-10!70;UBERON:0000486!1.71e-10!82;UBERON:0003104!3.96e-10!238;UBERON:0009142!3.96e-10!238;UBERON:0000490!1.74e-08!138;UBERON:0001134!4.63e-08!61;UBERON:0002036!4.63e-08!61;UBERON:0003082!4.63e-08!61;UBERON:0005256!3.19e-07!143;UBERON:0002385!4.26e-07!63;UBERON:0001015!4.26e-07!63;UBERON:0000383!4.26e-07!63;UBERON:0002100!5.07e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.25e-11,148;UBERON:0002329,1.09e-10,71;UBERON:0003059,1.09e-10,71;UBERON:0007282,1.09e-10,71;UBERON:0004290,1.09e-10,71;UBERON:0009618,1.09e-10,71;UBERON:0000486,1.23e-10,83;UBERON:0007524,3.93e-10,73;UBERON:0003077,4.48e-10,72;UBERON:0007285,4.48e-10,72;UBERON:0007503,9.43e-10,78;UBERON:0001134,3.44e-08,62;UBERON:0002036,3.44e-08,62;UBERON:0003082,3.44e-08,62;UBERON:0002385,3.99e-07,64;UBERON:0001015,3.99e-07,64;UBERON:0000383,3.99e-07,64;UBERON:0005256,5.82e-07,122;UBERON:0002100,7.46e-07,199 | |||
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| ||
|short_description=p2@RPL11 | |short_description=p2@RPL11 | ||
}} | }} |
Latest revision as of 16:39, 16 September 2015
Short description: | p2@RPL11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL11_5end |
Coexpression cluster: | C1162_embryonic_iPS_Keratinocyte_giant_teratocarcinoma_acute_chronic |
Association with transcript: | 0bp_to_ENST00000374550, NM_000975, NM_001199802_5end |
EntrezGene: | RPL11 |
HGNC: | 10301 |
UniProt: | P62913Q5VVD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.44e-16 | 250 |
epithelial cell | 2.90e-15 | 253 |
mesodermal cell | 8.28e-10 | 121 |
electrically responsive cell | 5.20e-09 | 61 |
electrically active cell | 5.20e-09 | 61 |
muscle precursor cell | 6.84e-09 | 58 |
myoblast | 6.84e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.84e-09 | 58 |
muscle cell | 4.55e-08 | 55 |
squamous epithelial cell | 2.19e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 8.25e-11 | 148 |
somite | 1.09e-10 | 71 |
presomitic mesoderm | 1.09e-10 | 71 |
presumptive segmental plate | 1.09e-10 | 71 |
dermomyotome | 1.09e-10 | 71 |
trunk paraxial mesoderm | 1.09e-10 | 71 |
multilaminar epithelium | 1.23e-10 | 83 |
dense mesenchyme tissue | 3.93e-10 | 73 |
paraxial mesoderm | 4.48e-10 | 72 |
presumptive paraxial mesoderm | 4.48e-10 | 72 |
epithelial vesicle | 9.43e-10 | 78 |
skeletal muscle tissue | 3.44e-08 | 62 |
striated muscle tissue | 3.44e-08 | 62 |
myotome | 3.44e-08 | 62 |
muscle tissue | 3.99e-07 | 64 |
musculature | 3.99e-07 | 64 |
musculature of body | 3.99e-07 | 64 |
trunk mesenchyme | 5.82e-07 | 122 |
trunk | 7.46e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.57e-23 | 239 |
cancer | 3.10e-22 | 235 |
organ system cancer | 5.74e-11 | 137 |
cell type cancer | 1.92e-10 | 143 |
carcinoma | 1.26e-09 | 106 |
hematologic cancer | 1.02e-07 | 51 |
immune system cancer | 1.02e-07 | 51 |