FFCP PHASE1:Hg19::chr20:46414823..46414848,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWU5,B1AMP9 | |||
|association_with_transcript=-15bp_to_NM_018837,uc002xto.2,uc010ghv.1_5end | |||
|cluster_id=chr20:46414823..46414848,- | |||
|description=CAGE_peak_3_at_SULF2_5end | |||
|id=chr20:46414823..46414848,- | |||
|ontology_enrichment_celltype=CL:0002139!2.48e-11!24;CL:0000115!9.11e-10!35;CL:0002057!2.81e-09!42;CL:0002078!1.49e-08!44;CL:0000071!1.04e-07!18;CL:0002546!1.04e-07!18;CL:0000860!1.46e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.71e-13;24!CL:0000115;9.74e-10;36!CL:0000071;1.39e-08;18!CL:0000860;5.43e-08;33!CL:0002057;5.43e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.70e-13,24;CL:0000115,1.83e-11,36;CL:0000860,3.43e-09,42;CL:0002057,3.43e-09,42;CL:0002078,5.24e-09,45;CL:0000071,7.35e-09,18;CL:0002546,7.35e-09,18;CL:0000473,4.35e-07,48;CL:0000234,4.35e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-08;18!CL:0002057;8.72e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.03e-22!659;UBERON:0000467!3.21e-18!625;UBERON:0000480!6.05e-18!626;UBERON:0000922!4.71e-12!612;UBERON:0002050!1.72e-11!605;UBERON:0005423!1.72e-11!605;UBERON:0000923!4.08e-11!604;UBERON:0005291!4.08e-11!604;UBERON:0006598!4.08e-11!604;UBERON:0002532!4.08e-11!604;UBERON:0000062!6.72e-11!511;UBERON:0007023!2.89e-09!115;UBERON:0001986!1.04e-07!18;UBERON:0004638!1.04e-07!18;UBERON:0004852!1.04e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-08;18!UBERON:0001986;1.39e-08;18!UBERON:0004852;1.39e-08;18!UBERON:0006914;9.08e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.10e-09,564;UBERON:0005423,2.86e-09,581;UBERON:0004638,7.35e-09,18;UBERON:0001986,7.35e-09,18;UBERON:0004852,7.35e-09,18;UBERON:0000923,9.49e-09,560;UBERON:0010316,9.49e-09,560;UBERON:0005291,9.49e-09,560;UBERON:0006598,9.49e-09,560;UBERON:0010317,9.49e-09,560;UBERON:0002532,9.49e-09,560;UBERON:0000922,1.05e-08,592;UBERON:0006914,6.19e-07,25 | |||
|phase1_expression=1.81678379270557,1.49870366723688,0.704772020479856,1.0007329835313,1.78784437770915,1.74467704820074,2.53299878168311,0,0.522371256399677,0.737201809504527,0,1.09220686065086,0.791300934685361,0,0,0,0,0,0.975865597581014,2.70866327768933,0.204000691244253,4.70182082217132,2.86235987131057,0.410623275218653,0.251085279189606,0,0,0,2.75354993794233,2.30297638858328,3.56077083626975,1.83884244895785,2.409647350226,0,0,0,0,0.553995408531877,4.61252229181326,2.82114131930607,0,0.647787332037959,0.257575567634187,4.50734540216651,4.1566353805769,2.91100873425379,3.48643555358527,3.70051099219643,2.78735733805593,2.01384674625505,1.0246428261164,0.709446689665756,3.7922024881028,1.29096936716765,4.06279459783025,6.02375486536335,2.45615535052061,2.47195832889593,3.67300670845083,3.53021929783703,2.55734850319616,2.30895910130701,1.39624560335142,0.852449501065388,2.32167390902867,2.26954089876456,0.622822248995575,2.26123798731069,1.0429658368404,1.08594422352558,1.21079900526674,4.05105399586321,1.26584954976354,1.69004229049553,1.27562579979026,1.46761051855863,5.16711703273877,2.85336096398862,2.89306056054744,1.14005097496499,2.78483348078726,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,4.87613732627923,4.02420515822182,1.66221330396589,2.89151321907653,11.5307719446255,6.22840031531542,3.9764297352555,5.35298357332899,0.567208902984407,0.221729397462564,0.263504357079378,4.1913304159268,2.18577172975525,0.370784442784429,3.57002133020152,5.04976238167875,4.25465473660369,28.3803842923357,16.0158575018436,14.486842551853,3.57772333260069,1.72046919021225,7.98423153697467,4.52246353539208,3.35599548967925,1.6507082516404,2.92592953151535,6.71883573840255,8.53839030448104,16.0665894127042,14.0990260988201,3.80136052859256,14.8877855104383,5.8826092855339,4.86085168729056,2.67899184852239,2.02076435363553,2.25222960966644,3.06633274931766,1.89853131913626,2.38162267109529,0,0,3.92484646928281,0,0.379891534993739,0,2.29469296599051,0,1.12135520028461,0,0.98667019366864,3.42332138939743,1.0776853765575,2.28846664358842,2.27036141467397,0.576175924479999,0.70296429550139,0,0,0,0,0,0,0,0,0,3.56400857184616,2.47266929278557,1.82032272387605,0.718618141816238,0,0,0,1.31693286264251,1.5324389789951,1.80285670687916,0.340296549480063,2.51145489964407,10.6778694409284,2.7551147150743,0.300091096084402,2.16410311400722,3.86460810068444,2.60563598864226,0.843881661206331,0.389748020644795,1.26216887122057,6.16734320903406,1.45481451136931,4.9701342952326,1.30977727695932,0.169560592310488,4.25173876959253,3.81844568827169,4.58887352622406,0.365921118388786,0.530119073285941,0.813357600086629,1.7622379352613,0.252320850875628,0,3.12899064659632,2.57296375277154,2.76269842704961,0,0,0.236613600079688,0,0,0,0,0,0,0,0,3.69077727312324,1.40241773803446,13.1703683626048,11.7606969108434,2.53510069643662,0,1.18157981336281,0,0.245976877086227,0,5.48751427043128,0,1.70899253099772,6.85154494173119,0,0,0,1.62302566965108,1.29149563659404,6.6408565970094,10.1856812766854,6.46864117597634,16.5942923571448,23.1791263765616,0,0,0.148631162288728,1.87467667973554,3.35964256397719,1.98485136139341,1.61205340865127,2.3250715081117,4.21720947081732,0,0,0.207328115540772,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0.904902010304444,0,2.535908257668,0.26593811658487,0,0,0,0,3.57444984145369,7.05408087008876,0,0,2.48774364119782,1.58390374586686,0.602878754119172,0.871533458600294,1.79951384127703,1.2162378064119,0.502257091432126,0,0,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0.254094624222463,2.60279707715243,0,1.50764638800914,0,2.24702107184155,2.99161459204025,2.90090859405225,0.36807447515742,0,0,0.623912584592421,0,0,0,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.391602314925481,0,1.86091223510599,2.5885704098234,1.06727557803444,0,1.66435439510497,0.30239029332968,1.73675465473144,5.67809301165831,2.80660094433074,0.256278298511402,4.60536524160033,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,5.21316822788541,1.84161977871793,0.68888668898764,0,1.70461739447251,0.902399225814824,0.308061348417659,0,1.46139224653261,0.73886140225013,7.96133688496276,9.18506008493184,4.31831832204279,9.25363516141736,0.541892875087706,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0,0.650756789328606,0.721287081534056,0,0,5.74265537996172,5.20048196829217,0,0.676695028044854,0.154048617114644,0.614014698904518,0,4.40423003959922,2.0302337147992,0.255679882248303,5.34192213880424,1.32227932288782,0.960950336825531,2.29702882490251,1.51736671283325,0,0,0,0,0,0,0.74129687641568,0.143124886741991,0.372158369359667,0.316379424718726,5.3376454298671,0,0.42793898803392,0,0,4.49681143958287,8.23611089208164,3.53437207037059,0.202182481573316,0,0,2.92580243453754,0,0,0.682499557039929,0.424216295861138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| |||
|short_description=p3@SULF2 | |||
}} |
Latest revision as of 16:41, 16 September 2015
Short description: | p3@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SULF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_NM_018837, uc002xto.2, uc010ghv.1_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | Q8IWU5B1AMP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.70e-13 | 24 |
endothelial cell | 1.83e-11 | 36 |
classical monocyte | 3.43e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.43e-09 | 42 |
meso-epithelial cell | 5.24e-09 | 45 |
blood vessel endothelial cell | 7.35e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.35e-09 | 18 |
defensive cell | 4.35e-07 | 48 |
phagocyte | 4.35e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.10e-09 | 564 |
developing anatomical structure | 2.86e-09 | 581 |
blood vessel endothelium | 7.35e-09 | 18 |
endothelium | 7.35e-09 | 18 |
cardiovascular system endothelium | 7.35e-09 | 18 |
germ layer | 9.49e-09 | 560 |
germ layer / neural crest | 9.49e-09 | 560 |
embryonic tissue | 9.49e-09 | 560 |
presumptive structure | 9.49e-09 | 560 |
germ layer / neural crest derived structure | 9.49e-09 | 560 |
epiblast (generic) | 9.49e-09 | 560 |
embryo | 1.05e-08 | 592 |
squamous epithelium | 6.19e-07 | 25 |