FFCP PHASE1:Hg19::chr2:120687335..120687357,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:120687335..120687357,+ to FFCP PHASE1:Hg19::chr2:120687335..120687357,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5775 | |EntrezGene=5775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9656 | |HGNC=9656 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1A0 | |UniProt=F5H1A0 | ||
|association_with_transcript=0bp_to_ENST00000544261,uc010yyr.1_5end | |||
|cluster_id=chr2:120687335..120687357,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_PTPN4_5end | |||
|id=chr2:120687335..120687357,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.68e-23!18;CL:0000789!6.68e-23!18;CL:0002420!6.68e-23!18;CL:0002419!6.68e-23!18;CL:0000790!6.68e-23!18;CL:0000738!1.54e-19!140;CL:0000037!6.15e-18!172;CL:0000566!6.15e-18!172;CL:0000084!2.46e-16!25;CL:0000827!2.46e-16!25;CL:0000988!9.91e-16!182;CL:0002032!1.45e-15!165;CL:0000837!1.45e-15!165;CL:0002087!1.98e-15!119;CL:0000625!3.64e-15!11;CL:0002031!1.41e-13!124;CL:0000838!1.76e-10!52;CL:0000542!3.99e-10!53;CL:0000051!3.99e-10!53;CL:0000624!3.59e-08!6;CL:0000766!3.79e-08!76;CL:0000763!5.64e-07!112;CL:0000049!5.64e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.63e-46;18!CL:0000789;7.63e-46;18!CL:0002419;7.63e-46;18!CL:0000084;5.87e-35;25!CL:0000625;1.00e-29;11!CL:0000624;3.02e-15;6!CL:0000542;1.16e-11;53!CL:0000623;4.04e-09;3!CL:0000898;6.03e-09;3!CL:0000767;1.93e-08;3!CL:0000226;2.09e-08;3!CL:0000842;2.09e-08;3!CL:0002087;9.31e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.52e-46,18;CL:0000789,8.52e-46,18;CL:0002420,8.52e-46,18;CL:0002419,8.52e-46,18;CL:0000790,8.52e-46,18;CL:0000084,6.50e-35,25;CL:0000827,6.50e-35,25;CL:0000625,1.06e-29,11;CL:0000838,1.63e-21,52;CL:0000542,5.52e-21,53;CL:0000051,5.52e-21,53;CL:0000738,2.75e-17,136;CL:0002087,9.46e-16,115;CL:0000624,3.22e-15,6;CL:0000037,4.70e-13,168;CL:0000988,6.75e-12,177;CL:0002031,1.62e-11,120;CL:0002032,1.88e-10,161;CL:0000837,1.88e-10,161;CL:0000623,3.98e-09,3;CL:0000825,3.98e-09,3;CL:0000898,6.11e-09,3;CL:0000767,1.88e-08,3;CL:0000226,2.14e-08,3;CL:0000842,2.14e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.63e-46;18!CL:0000051;1.16e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-24!115;UBERON:0002390!6.27e-12!102;UBERON:0003061!6.27e-12!102;UBERON:0000178!3.27e-11!15;UBERON:0000179!3.27e-11!15;UBERON:0000463!3.27e-11!15;UBERON:0002193!5.18e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-23;15!UBERON:0000179;6.20e-23;15!UBERON:0000463;6.20e-23;15!UBERON:0002390;4.22e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.14e-23,15;UBERON:0000179,6.14e-23,15;UBERON:0000463,6.14e-23,15;UBERON:0002390,1.11e-07,98;UBERON:0003061,1.11e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,25.7165696725133,5.57338043937874,0,0,0,0,0,0,5.53995408531877,2.4065333696417,4.34021741431704,2.68698569087909,4.21061765824673,0.515151135268373,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.818718450173537,0.449446968890169,0.918251677112708,1.28371610830437,0,0.659702600373432,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.14681968437569,0,3.92355994087075,0,3.540775862049,5.50215067848831,3.28962398399215,50.3231351125941,13.3628129319772,11.8361951433683,17.534405556712,55.1481761581609,18.8547780783896,11.5197625183483,20.3102897823762,29.0767295777283,27.0523442924547,38.4784696772602,49.7430032014527,56.8014048040703,8.30404753707538,5.61835738988397,1.04535523804977,74.5575474949985,31.4240804753575,20.9612741744404,26.3140479700283,43.9620271767253,52.0866763085135,63.6802869780411,36.5897539358988,44.9233005152009,51.2215978864618,59.6678675150923,68.1536237444469,25.2008429030916,12.5696892018248,8.11016661743674,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.870648686496336,0,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,22.9774545186731,38.8150597597797,23.2877780848279,19.893170623361,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3722414367588,8.41285383192606,10.2458455491307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,16.2383234954294,11.4695581071356,14.2411796793541,22.63201866849,21.3908382004821,9.72709966789076,13.5007859309529,12.6900028207083,0,0,0,0,0,0,0,0.399158742865633,0.383010740264733,0,0,4.49275484981534,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0,0.493217028184668,11.974154617347,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.769502585037971,0,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0.317873157960757,0,0,0,0,0,1.32686346755009,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.581934098930517,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,1.17241786942466,0,0,0.13223260174269,0,0,2.45611048905698,0.943225830597996,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,2.46957305945423,0.874238242015829,0,0,0,0.196308467114945,0.297046400327086,0,0,5.16911548889195,1.48253142339228,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.20686599172379,0.213233981900981,0,0.516711278688049,0.558672428662721,0,0.12729431655633,0.202117188958219,0.653150243690884,0,0.673520530145875,0.717222053926764,0,0,0,0,0,0,0.733448665097199,0,0,0.603821380773079,0 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| ||
|short_description=p5@PTPN4 | |||
}} | }} |
Latest revision as of 17:17, 16 September 2015
Short description: | p5@PTPN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPN4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000544261, uc010yyr.1_5end |
EntrezGene: | PTPN4 |
HGNC: | 9656 |
UniProt: | F5H1A0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.52e-46 | 18 |
alpha-beta T cell | 8.52e-46 | 18 |
immature T cell | 8.52e-46 | 18 |
mature T cell | 8.52e-46 | 18 |
immature alpha-beta T cell | 8.52e-46 | 18 |
T cell | 6.50e-35 | 25 |
pro-T cell | 6.50e-35 | 25 |
CD8-positive, alpha-beta T cell | 1.06e-29 | 11 |
lymphoid lineage restricted progenitor cell | 1.63e-21 | 52 |
lymphocyte | 5.52e-21 | 53 |
common lymphoid progenitor | 5.52e-21 | 53 |
leukocyte | 2.75e-17 | 136 |
nongranular leukocyte | 9.46e-16 | 115 |
CD4-positive, alpha-beta T cell | 3.22e-15 | 6 |
hematopoietic stem cell | 4.70e-13 | 168 |
hematopoietic cell | 6.75e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.62e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.88e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-10 | 161 |
natural killer cell | 3.98e-09 | 3 |
pro-NK cell | 3.98e-09 | 3 |
naive T cell | 6.11e-09 | 3 |
basophil | 1.88e-08 | 3 |
single nucleate cell | 2.14e-08 | 3 |
mononuclear cell | 2.14e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.14e-23 | 15 |
haemolymphatic fluid | 6.14e-23 | 15 |
organism substance | 6.14e-23 | 15 |
hematopoietic system | 1.11e-07 | 98 |
blood island | 1.11e-07 | 98 |