FFCP PHASE1:Hg19::chr8:141018677..141018706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83696 | |EntrezGene=83696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |HGNC=30832 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000524162_5end | |association_with_transcript=0bp_to_ENST00000524162_5end | ||
|cluster_id=chr8:141018677..141018706,- | |||
|coexpression_cluster_id=C1119 | |||
|description=CAGE_peak_5_at_TRAPPC9_5end | |description=CAGE_peak_5_at_TRAPPC9_5end | ||
|id=chr8:141018677..141018706,- | |id=chr8:141018677..141018706,- | ||
|ontology_enrichment_celltype=CL:0000181!7.48e-08!12;CL:0000417!7.48e-08!12;CL:0000668!7.48e-08!12;CL:0000414!7.48e-08!12;CL:0000412!7.48e-08!12;CL:0000182!7.48e-08!12 | |ontology_enrichment_celltype=CL:0000181!7.48e-08!12;CL:0000417!7.48e-08!12;CL:0000668!7.48e-08!12;CL:0000414!7.48e-08!12;CL:0000412!7.48e-08!12;CL:0000182!7.48e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.44e-16;1!CL:0000123;2.23e-08;2!CL:0002535;2.23e-08;2!CL:0000242;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.44e-16,1;CL:0002535,2.31e-08,2;CL:0000242,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.78e-43;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;7.95e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.48e-10,14 | |||
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| ||
|short_description=p5@TRAPPC9 | |short_description=p5@TRAPPC9 | ||
}} | }} |
Latest revision as of 18:58, 16 September 2015
Short description: | p5@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAPPC9_5end |
Coexpression cluster: | C1119_nonsmall_smallcell_argyrophil_small_duodenum_esophagus_cerebellum |
Association with transcript: | 0bp_to_ENST00000524162_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.44e-16 | 1 |
epithelial cell of cervix | 2.31e-08 | 2 |
Merkel cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.19e-25 | 9 |
metencephalon | 1.19e-25 | 9 |
future metencephalon | 1.19e-25 | 9 |
cerebellum | 4.06e-22 | 6 |
rhombic lip | 4.06e-22 | 6 |
segmental subdivision of hindbrain | 2.44e-19 | 12 |
hindbrain | 2.44e-19 | 12 |
presumptive hindbrain | 2.44e-19 | 12 |
segmental subdivision of nervous system | 7.01e-18 | 13 |
posterior neural tube | 1.53e-15 | 15 |
chordal neural plate | 1.53e-15 | 15 |
small intestine | 4.44e-12 | 4 |
uterine epithelium | 2.31e-08 | 2 |
cervix epithelium | 2.31e-08 | 2 |
intestine | 1.53e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.48e-10 | 14 |