FFCP PHASE1:Hg19::chr1:147245407..147245417,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2702 | |EntrezGene=2702 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4279 | |HGNC=4279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000430508_5end | |association_with_transcript=40bp_to_ENST00000430508_5end | ||
|cluster_id=chr1:147245407..147245417,- | |||
|coexpression_cluster_id=C2521 | |||
|description=CAGE_peak_5_at_GJA5_5end | |description=CAGE_peak_5_at_GJA5_5end | ||
|id=chr1:147245407..147245417,- | |id=chr1:147245407..147245417,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002557;1.22e-17;1!CL:1000413;2.09e-17;9!CL:0002545;7.98e-10;2!CL:0000071;5.16e-09;18!CL:0002139;6.82e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002557,1.03e-17,1;CL:1000413,2.03e-17,9;CL:0002545,7.98e-10,2;CL:0000071,5.09e-09,18;CL:0002546,5.09e-09,18;CL:0002139,6.75e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.16e-18;1!UBERON:0000358;6.78e-18;1!CL:0002546;5.16e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;1.22e-17;1!DOID:4556;7.08e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,8.72e-18,1;DOID:4556,7.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-38!115;UBERON:0007100!2.97e-11!27;UBERON:0002298!3.48e-11!8;UBERON:0003103!1.25e-10!69;UBERON:0003978!1.46e-07!3;UBERON:0009751!1.46e-07!3;UBERON:0000946!1.46e-07!3;UBERON:0002523!1.46e-07!3;UBERON:0005983!1.46e-07!3;UBERON:0002165!1.46e-07!3;UBERON:0002062!1.46e-07!3;UBERON:0007280!1.46e-07!3;UBERON:0000948!2.07e-07!24;UBERON:0005498!2.07e-07!24;UBERON:0004140!2.07e-07!24;UBERON:0009881!2.07e-07!24;UBERON:0004141!2.07e-07!24;UBERON:0003084!2.07e-07!24;UBERON:0007005!2.07e-07!24;UBERON:0004139!2.07e-07!24;UBERON:0004291!2.07e-07!24;UBERON:0004111!2.25e-07!241;UBERON:0000477!3.19e-07!286;UBERON:0000025!3.20e-07!194;UBERON:0006947!5.28e-07!3;UBERON:0004054!5.28e-07!3;UBERON:0003075!5.63e-07!86;UBERON:0007284!5.63e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;4.83e-18;1!UBERON:0003915;2.09e-17;9!UBERON:0004700;2.09e-17;9!UBERON:0001917;2.09e-17;9!UBERON:0005800;7.98e-10;2!UBERON:0001515;7.98e-10;2!UBERON:0002133;1.07e-09;2!UBERON:0000078;1.71e-09;2!UBERON:0002012;1.71e-09;2!UBERON:0008886;1.71e-09;2!UBERON:0004638;5.16e-09;18!UBERON:0001986;5.16e-09;18!UBERON:0004852;5.16e-09;18!UBERON:0010313;1.49e-07;10!UBERON:0000487;1.79e-07;22!UBERON:0003978;7.08e-07;3!UBERON:0000946;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,4.44e-18,1;UBERON:0003915,2.03e-17,9;UBERON:0004700,2.03e-17,9;UBERON:0001917,2.03e-17,9;UBERON:0007100,3.92e-10,27;UBERON:0005800,7.98e-10,2;UBERON:0001515,7.98e-10,2;UBERON:0002133,1.03e-09,2;UBERON:0000078,1.57e-09,2;UBERON:0007497,1.57e-09,2;UBERON:0003643,1.57e-09,2;UBERON:0003504,1.57e-09,2;UBERON:0003469,1.57e-09,2;UBERON:0003496,1.57e-09,2;UBERON:0002012,1.57e-09,2;UBERON:0008886,1.57e-09,2;UBERON:0007303,1.57e-09,2;UBERON:0002061,1.57e-09,2;UBERON:0005432,1.57e-09,2;UBERON:0004363,1.57e-09,2;UBERON:0004638,5.09e-09,18;UBERON:0001986,5.09e-09,18;UBERON:0004852,5.09e-09,18;UBERON:0010313,1.42e-07,10;UBERON:0002342,1.42e-07,10;UBERON:0005062,1.42e-07,10;UBERON:0000487,1.77e-07,22;UBERON:0007500,4.14e-07,59;UBERON:0001981,4.14e-07,59;UBERON:0004537,4.14e-07,59;UBERON:0006965,4.14e-07,59;UBERON:0004872,4.74e-07,83;UBERON:0003978,6.88e-07,3;UBERON:0009751,6.88e-07,3;UBERON:0000946,6.88e-07,3;UBERON:0002523,6.88e-07,3;UBERON:0005983,6.88e-07,3;UBERON:0002165,6.88e-07,3;UBERON:0002062,6.88e-07,3;UBERON:0007280,6.88e-07,3;UBERON:0001009,7.18e-07,112;UBERON:0000948,7.46e-07,24;UBERON:0005498,7.46e-07,24;UBERON:0004140,7.46e-07,24;UBERON:0009881,7.46e-07,24;UBERON:0004141,7.46e-07,24;UBERON:0003084,7.46e-07,24;UBERON:0007005,7.46e-07,24;UBERON:0004139,7.46e-07,24;UBERON:0004291,7.46e-07,24;UBERON:0004145,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,6.87795104850169,2.50793959844173,0,0,0,0,0,0,0,14.5825550618717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808264032418128,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58805056424029,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6653598399891,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,0.229160424011684,0.717873024576814,0.399358000997982,0.858452096273142,1.11585728720936,7.18863155607971,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,0.996637174564964,0,4.12360880465543,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,1.17466153824464,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.25458863311266,0.404234377916439,0,0.342233301085281,0.26940821205835,0.358611026963382,0.332660356546013,0,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,6.87795104850169,2.50793959844173,0,0,0,0,0,0,0,14.5825550618717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808264032418128,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58805056424029,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6653598399891,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,0.229160424011684,0.717873024576814,0.399358000997982,0.858452096273142,1.11585728720936,7.18863155607971,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,0.996637174564964,0,4.12360880465543,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,1.17466153824464,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.25458863311266,0.404234377916439,0,0.342233301085281,0.26940821205835,0.358611026963382,0.332660356546013,0,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p5@GJA5 | |short_description=p5@GJA5 | ||
}} | }} |
Latest revision as of 19:43, 16 September 2015
Short description: | p5@GJA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GJA5_5end |
Coexpression cluster: | C2521_Endothelial_heart_Fibroblast_large_acute_adipose_kidney |
Association with transcript: | 40bp_to_ENST00000430508_5end |
EntrezGene: | GJA5 |
HGNC: | 4279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of pulmonary artery | 1.03e-17 | 1 |
endothelial cell of artery | 2.03e-17 | 9 |
thoracic aorta endothelial cell | 7.98e-10 | 2 |
blood vessel endothelial cell | 5.09e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.09e-09 | 18 |
endothelial cell of vascular tree | 6.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 8.72e-18 | 1 |
lung large cell carcinoma | 7.28e-07 | 3 |