FFCP PHASE1:Hg19::chr2:28974456..28974479,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:28974456..28974479,+
|short_description=p6@PPP1CB
|description=CAGE_peak_6_at_PPP1CB_5end
|association_with_transcript=-26bp_to_ENST00000455580_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5500 | |EntrezGene=5500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9282 | |HGNC=9282 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETD8 | |UniProt=E7ETD8 | ||
|association_with_transcript=-26bp_to_ENST00000455580_5end | |||
|cluster_id=chr2:28974456..28974479,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_PPP1CB_5end | |||
|id=chr2:28974456..28974479,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.04e-28!76;CL:0000763!9.57e-28!112;CL:0000049!9.57e-28!112;CL:0000860!1.29e-26!45;CL:0002057!8.07e-26!42;CL:0000557!3.59e-25!71;CL:0002009!4.42e-22!65;CL:0000839!6.04e-22!70;CL:0002194!3.56e-21!63;CL:0000576!3.56e-21!63;CL:0000040!3.56e-21!63;CL:0000559!3.56e-21!63;CL:0000037!2.39e-14!172;CL:0000566!2.39e-14!172;CL:0002032!4.04e-14!165;CL:0000837!4.04e-14!165;CL:0000988!2.16e-12!182;CL:0000738!8.08e-12!140;CL:0002031!8.64e-09!124;CL:0002087!4.75e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.79e-21;33!CL:0002057;8.79e-21;33!CL:0000576;3.52e-17;48!CL:0000473;1.62e-16;39!CL:0000234;1.62e-16;39!CL:0000766;6.55e-15;69!CL:0000763;1.07e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.20e-28,72;CL:0000763,3.42e-28,108;CL:0000049,3.42e-28,108;CL:0000860,3.86e-27,42;CL:0002057,3.86e-27,42;CL:0000473,7.09e-26,48;CL:0000234,7.09e-26,48;CL:0000557,1.73e-25,67;CL:0002009,3.07e-22,61;CL:0000839,4.98e-22,66;CL:0002194,2.75e-21,59;CL:0000576,2.75e-21,59;CL:0000040,2.75e-21,59;CL:0000559,2.75e-21,59;CL:0002032,8.51e-14,161;CL:0000837,8.51e-14,161;CL:0000037,9.08e-14,168;CL:0000988,1.70e-12,177;CL:0000738,5.59e-11,136;CL:0002031,2.99e-08,120;CL:0002087,1.61e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-20;42!CL:0000049;2.08e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.50e-24!102;UBERON:0003061!3.50e-24!102;UBERON:0002193!5.49e-21!112;UBERON:0002371!1.39e-20!80;UBERON:0001474!2.24e-19!86;UBERON:0004765!5.90e-15!101;UBERON:0001434!5.90e-15!101;UBERON:0002405!6.81e-13!115;UBERON:0003081!2.36e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.96e-25,98;UBERON:0003061,5.96e-25,98;UBERON:0002193,2.67e-21,108;UBERON:0002371,7.49e-21,76;UBERON:0001474,4.75e-19,82;UBERON:0002405,2.12e-17,93;UBERON:0004765,1.08e-15,90;UBERON:0001434,2.65e-13,100;UBERON:0003081,3.17e-08,203 | |||
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| ||
|short_description=p6@PPP1CB | |||
}} | }} |
Latest revision as of 19:48, 16 September 2015
Short description: | p6@PPP1CB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPP1CB_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -26bp_to_ENST00000455580_5end |
EntrezGene: | PPP1CB |
HGNC: | 9282 |
UniProt: | E7ETD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.20e-28 | 72 |
myeloid cell | 3.42e-28 | 108 |
common myeloid progenitor | 3.42e-28 | 108 |
classical monocyte | 3.86e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-27 | 42 |
defensive cell | 7.09e-26 | 48 |
phagocyte | 7.09e-26 | 48 |
granulocyte monocyte progenitor cell | 1.73e-25 | 67 |
macrophage dendritic cell progenitor | 3.07e-22 | 61 |
myeloid lineage restricted progenitor cell | 4.98e-22 | 66 |
monopoietic cell | 2.75e-21 | 59 |
monocyte | 2.75e-21 | 59 |
monoblast | 2.75e-21 | 59 |
promonocyte | 2.75e-21 | 59 |
hematopoietic oligopotent progenitor cell | 8.51e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.51e-14 | 161 |
hematopoietic stem cell | 9.08e-14 | 168 |
hematopoietic cell | 1.70e-12 | 177 |
leukocyte | 5.59e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.99e-08 | 120 |
nongranular leukocyte | 1.61e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.96e-25 | 98 |
blood island | 5.96e-25 | 98 |
hemolymphoid system | 2.67e-21 | 108 |
bone marrow | 7.49e-21 | 76 |
bone element | 4.75e-19 | 82 |
immune system | 2.12e-17 | 93 |
skeletal element | 1.08e-15 | 90 |
skeletal system | 2.65e-13 | 100 |
lateral plate mesoderm | 3.17e-08 | 203 |