FFCP PHASE1:Hg19::chr20:48746141..48746153,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:48746141..48746153,-
|short_description=p5@TMEM189-UBE2V1
|description=CAGE_peak_5_at_TMEM189-UBE2V1_5end
|association_with_transcript=27bp_to_U39361_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387522 | |EntrezGene=387522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=33521 | |HGNC=33521 | ||
|TSSclassifier=strong | |||
|UniProt=Q13404 | |UniProt=Q13404 | ||
|association_with_transcript=27bp_to_U39361_5end | |||
|cluster_id=chr20:48746141..48746153,- | |||
|description=CAGE_peak_5_at_TMEM189-UBE2V1_5end | |||
|id=chr20:48746141..48746153,- | |||
|ontology_enrichment_celltype=CL:0000860!2.28e-11!45;CL:0002057!4.03e-11!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-34;33!CL:0002057;7.64e-34;33!CL:0000473;4.80e-24;39!CL:0000234;4.80e-24;39!CL:0000576;1.13e-14;48!CL:0000766;1.02e-08;69!CL:0002334;7.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.10e-28,42;CL:0002057,2.10e-28,42;CL:0000473,5.59e-26,48;CL:0000234,5.59e-26,48;CL:0002194,4.18e-19,59;CL:0000576,4.18e-19,59;CL:0000040,4.18e-19,59;CL:0000559,4.18e-19,59;CL:0002009,3.17e-18,61;CL:0000839,2.92e-16,66;CL:0000557,6.64e-16,67;CL:0000766,2.84e-14,72;CL:0000763,7.50e-08,108;CL:0000049,7.50e-08,108;CL:0002334,3.50e-07,12;CL:0002087,6.26e-07,115;CL:0002579,9.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-21;42!UBERON:0005795;7.32e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-14,76;UBERON:0001474,1.08e-12,82;UBERON:0004765,8.03e-12,90;UBERON:0002405,2.49e-11,93;UBERON:0001434,7.12e-10,100;UBERON:0002390,2.09e-09,98;UBERON:0003061,2.09e-09,98;UBERON:0000926,9.96e-09,315;UBERON:0004120,9.96e-09,315;UBERON:0006603,9.96e-09,315;UBERON:0002193,1.05e-08,108;UBERON:0003081,3.10e-07,203 | |||
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|phase1_expression=0.726713517082227,2.78330681058278,1.26858963686374,0,0,2.61701557230111,0,1.26343974685366,0.261185628199839,0,1.39560233594486,0.655324116390517,0.527533956456907,1.11389717664042,0.331397375727916,2.01697543935533,0.602694528023977,0.730310090387373,1.46379839637152,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0.472264687882075,0.393364276848904,0.383829398097213,0,0.919421224478927,0.30120591877825,0.739508020333575,0.232401601740905,0.142169232487422,0,0,1.00272223735071,0,0,0,0,4.65274364094607,6.04601509902095,4.12392904019288,3.71886459049095,6.98985409637104,1.85823822537062,1.43846196161075,1.5369642391746,0.236482229888585,0.344745680736619,2.5819387343353,1.35426486594342,5.27078550719293,8.46009065179322,2.9214052977861,5.50951006267625,3.20929027076094,2.55734850319616,0.989553900560148,3.39088217956774,1.27867425159808,3.77272010217159,2.26954089876456,3.11411124497787,0.251248665256743,0,1.08594422352558,4.23779651843358,3.68277635987565,1.58231193720442,0.211255286311942,0.850417199860174,0.419317291016752,0.112328631146495,0.300353785683013,0,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.640456598628376,0.520237390239513,0.493313713811028,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.443458794925128,0.087834785693126,0.130979075497713,0.728590576585084,1.11235332835329,0,0,0.26591592103773,0,0,0,0,0.860234595106124,0,0.56530794192401,1.25849830862972,1.10047216776027,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.367663080345869,2.43042584364528,0.17859945656816,0.44905874525234,0.225222960966644,3.06633274931766,0.949265659568129,0.366403487860815,0,0,0.436094052142534,2.48485975847659,0.12663051166458,0,0.573673241497627,0.709336764396714,0,1.06748995729705,0.98667019366864,0,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.309977343527296,0,0.494533858557114,0,2.87447256726495,0.168336113954066,0.500474079487857,0,0,0.612975591598039,0.45071417671979,0.453728732640084,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.368199594569197,0.484938170456436,0,0,0,0.773043412653187,0.818238361772504,0.860413786167011,0.243947412259191,0.265059536642971,0.232387885739037,0,1.00928340350251,0.36497735907583,0,1.28648187638577,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0.964044119533928,0.992645754591546,0.435758888184812,0.474541238222193,0.674156540800822,0.98110732562673,0.769494313892781,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.491953754172454,0.343135620597051,1.09750285408626,0,0.402115889646523,0.462942225792648,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.951270761172991,1.58040879591855,0.858486162094873,0,0,0.297262324577456,0,0.503946384596579,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.44024217006613,0,0,0.37872730027914,0,0.763976851116555,0,0,0.308482478109971,0,0.857479297891735,0,0.43596006883328,0.2933531432838,0.387815147273333,0,1.690605505112,0.531876233169741,1.04007436911366,0,1.41849132023278,0.799266537048298,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0,0.904318131178758,0,0.699810938274399,0,2.00902836572851,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0,0.336255431980582,0.197030760201927,0.431255149719035,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.49076596687656,0,0.813795071099207,0,0.892144943985809,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0,0.553107505625109,0.260650843404249,0.391602314925481,1.02943027143257,0,0,0.213455115606889,0,0,0.604780586659361,0.992431231275107,0.153461973288062,1.96462066103151,1.79394808957981,1.53512174720011,1.44768529029247,1.48418066444991,1.3878872442239,0.355123450626254,0.164254312027618,1.03850885836724,0.581051892299796,0.241718899183244,1.80455823272956,0.460404944679482,0.229628896329213,0.546273504020151,0.262248829918848,0,0.308061348417659,0.784349769176855,1.46139224653261,0.105551628892876,0,0.340187410553031,0,3.08454505380579,0.541892875087706,1.00337954770971,0,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0,0.640986253728404,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.460511024178389,0.689182862422653,0,0.290033387828457,0.340906509664404,0.0890320356467374,1.15699440752685,0.576570202095319,0,0.6069466851333,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0,0,0.3812603878476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| ||
|short_description=p5@TMEM189-UBE2V1 | |||
}} | }} |
Latest revision as of 20:36, 16 September 2015
Short description: | p5@TMEM189-UBE2V1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM189-UBE2V1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_U39361_5end |
EntrezGene: | TMEM189-UBE2V1 |
HGNC: | 33521 |
UniProt: | Q13404 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.10e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-28 | 42 |
defensive cell | 5.59e-26 | 48 |
phagocyte | 5.59e-26 | 48 |
monopoietic cell | 4.18e-19 | 59 |
monocyte | 4.18e-19 | 59 |
monoblast | 4.18e-19 | 59 |
promonocyte | 4.18e-19 | 59 |
macrophage dendritic cell progenitor | 3.17e-18 | 61 |
myeloid lineage restricted progenitor cell | 2.92e-16 | 66 |
granulocyte monocyte progenitor cell | 6.64e-16 | 67 |
myeloid leukocyte | 2.84e-14 | 72 |
myeloid cell | 7.50e-08 | 108 |
common myeloid progenitor | 7.50e-08 | 108 |
preadipocyte | 3.50e-07 | 12 |
nongranular leukocyte | 6.26e-07 | 115 |
omentum preadipocyte | 9.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-14 | 76 |
bone element | 1.08e-12 | 82 |
skeletal element | 8.03e-12 | 90 |
immune system | 2.49e-11 | 93 |
skeletal system | 7.12e-10 | 100 |
hematopoietic system | 2.09e-09 | 98 |
blood island | 2.09e-09 | 98 |
mesoderm | 9.96e-09 | 315 |
mesoderm-derived structure | 9.96e-09 | 315 |
presumptive mesoderm | 9.96e-09 | 315 |
hemolymphoid system | 1.05e-08 | 108 |
lateral plate mesoderm | 3.10e-07 | 203 |