FFCP PHASE1:Hg19::chr3:179280840..179280845,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:179280840..179280845,+ to FFCP PHASE1:Hg19::chr3:179280840..179280845,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=86 | |EntrezGene=86 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24124 | |HGNC=24124 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQT2 | |UniProt=C9JQT2 | ||
|association_with_transcript=93bp_to_ENST00000490364_5end | |||
|cluster_id=chr3:179280840..179280845,+ | |||
|description=CAGE_peak_3_at_ACTL6A_5end | |||
|id=chr3:179280840..179280845,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.73e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.90e-09;1!CL:0000786;4.90e-09;1!CL:0000945;7.47e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.75e-09,1;CL:0000786,5.75e-09,1;CL:0000980,5.75e-09,1;CL:0000945,8.07e-08,24;CL:0000826,8.07e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.19e-33!235;DOID:14566!1.45e-32!239;DOID:0050687!3.62e-16!143;DOID:305!1.30e-15!106;DOID:0050686!9.65e-15!137;DOID:2531!6.49e-10!51;DOID:0060083!6.49e-10!51;DOID:0060058!3.80e-08!10;DOID:1036!3.44e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.86e-27;10!DOID:1036;2.28e-09;8!DOID:0060060;4.90e-09;1!DOID:0060061;4.90e-09;1!DOID:8691;4.90e-09;1!DOID:2355;4.90e-09;1!DOID:2531;6.83e-08;51!DOID:0060083;6.83e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.25e-27,10;DOID:2531,1.94e-13,51;DOID:0060083,1.94e-13,51;DOID:0060060,2.60e-09,1;DOID:0060061,2.60e-09,1;DOID:8691,2.60e-09,1;DOID:1036,3.18e-09,8;DOID:2355,9.17e-09,1;DOID:162,3.36e-07,235;DOID:0050686,5.10e-07,137;DOID:14566,5.56e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.83e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.20e-07,10;UBERON:0000358,1.20e-07,10;UBERON:0000307,1.20e-07,10;UBERON:0000091,1.20e-07,10;UBERON:0000087,1.20e-07,10;UBERON:0007010,1.20e-07,10;UBERON:0007806,1.20e-07,10;UBERON:0008780,1.20e-07,10;UBERON:0005728,1.20e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0,0.30120591877825,0,1.85921281392724,1.13735385989937,0.293600439334847,0,0,0.217010870715852,0.447830948479849,0,0,0,0.377875943688809,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0,0.563057402416611,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0,0,0,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0.132529768321485,0.464775771478074,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.871517776369625,0.949082476444386,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,1.32438929824395,0.368965315629341,0,0.658501712451753,0,0.201057944823262,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0,0,0.335964256397719,0.708875486211932,0.179117045405697,0.581267877027924,0,0,0,0,0,0.12624243342638,0.317489471460845,0,0,0,0.308482478109971,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,1.20859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0.366277859273374,0.41254749960294,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.320472213382419,0,1.22520107990516,0.557409525377156,0.144269212976445,0.426851060090485,0,0.399158742865633,0,0.423347165447766,0,0,0,0.94007937463814,0,0.169291777801603,0,0.201799707191048,0,0.687010689511529,0.307240764308458,0.223676107892416,0,0,0,0,0.540911356951966,0.66614393599564,1.4098700508785,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0.140669416410513,0.111308705022906,0.659215496907038,0,0,0.276283915531148,0,0.20453736500431,0.615424027305347,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,1.01701460117107,0.236387681767936,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.544692317594951,0.139423744278603,0.0769502585037971,0.113942055847001,0.46112780877612,0.269272933229316,0.325942115766024,0,0,0,2.04386596391473,0.627921025580099,0.166211681900156,0.451191321234361,0.784250137270958,1.00692952185506,1.3282761290693,0.794682894901893,0.210998064528027,0.163232808159148,1.55488378577335,0.432777279484182,0,0.265372693510018,0,1.48260564340311,1.97702302314405,1.56632924258183,0.067401132980677,0,0,0.364909578431332,0.391329237864179,0.971121518136371,0,0,0,0,6.91487729306666,0.933193722575224,0,0,1.56966459203613,0,0.569219092059585,0,0.347119476670262,0.293977192243133,0.261177619741208,0,0,0.290268993867255,0.65780385377567,0.656923656425674,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,1.02956998717179,0.432164393964449,0,0.235694034616795,0.271808412147228,0,0.203996435272644,0.288950589901519,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,1.16495949527454,0.551482276150566,0.576911008668165,0.539228350833479,0.196854963029498,1.1007533168552,0,0,0.321506296930038,0.550157746388935,0.415440338029185,0,0,0,0.335434687599266,0,0.157363764404994,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0.326587360109409,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| ||
|short_description=p3@ACTL6A | |||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p3@ACTL6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTL6A_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000490364_5end |
EntrezGene: | ACTL6A |
HGNC: | 24124 |
UniProt: | C9JQT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 5.75e-09 | 1 |
plasma cell | 5.75e-09 | 1 |
plasmablast | 5.75e-09 | 1 |
lymphocyte of B lineage | 8.07e-08 | 24 |
pro-B cell | 8.07e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.20e-07 | 10 |
blastocyst | 1.20e-07 | 10 |
blastula | 1.20e-07 | 10 |
bilaminar disc | 1.20e-07 | 10 |
inner cell mass | 1.20e-07 | 10 |
cleaving embryo | 1.20e-07 | 10 |
connecting stalk | 1.20e-07 | 10 |
inner cell mass derived epiblast | 1.20e-07 | 10 |
extraembryonic mesoderm | 1.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.25e-27 | 10 |
hematologic cancer | 1.94e-13 | 51 |
immune system cancer | 1.94e-13 | 51 |
non-Hodgkin lymphoma | 2.60e-09 | 1 |
cutaneous T cell lymphoma | 2.60e-09 | 1 |
mycosis fungoides | 2.60e-09 | 1 |
chronic leukemia | 3.18e-09 | 8 |
anemia | 9.17e-09 | 1 |
cancer | 3.36e-07 | 235 |
organ system cancer | 5.10e-07 | 137 |
disease of cellular proliferation | 5.56e-07 | 239 |