FFCP PHASE1:Hg19::chr12:122017891..122017894,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBN2 | |||
|association_with_transcript=-342bp_to_ENST00000446152_5end | |||
|cluster_id=chr12:122017891..122017894,- | |||
|description=CAGE_peak_17_at_KDM2B_5end | |||
|id=chr12:122017891..122017894,- | |||
|ontology_enrichment_celltype=CL:0000084!1.53e-12!25;CL:0000827!1.53e-12!25;CL:0000791!1.05e-11!18;CL:0000789!1.05e-11!18;CL:0002420!1.05e-11!18;CL:0002419!1.05e-11!18;CL:0000790!1.05e-11!18;CL:0000838!2.46e-10!52;CL:0000542!6.09e-10!53;CL:0000051!6.09e-10!53;CL:0000625!1.79e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.51e-14;18!CL:0000789;6.51e-14;18!CL:0002419;6.51e-14;18!CL:0000624;2.79e-11;6!CL:0000623;9.29e-11;3!CL:0000084;7.08e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.77e-14,18;CL:0000789,5.77e-14,18;CL:0002420,5.77e-14,18;CL:0002419,5.77e-14,18;CL:0000790,5.77e-14,18;CL:0000624,2.23e-11,6;CL:0000623,5.59e-11,3;CL:0000825,5.59e-11,3;CL:0000838,5.98e-10,52;CL:0000084,6.50e-10,25;CL:0000827,6.50e-10,25;CL:0000542,9.80e-10,53;CL:0000051,9.80e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.51e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.53e-08;4!DOID:1612;4.53e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.47e-08,4;DOID:1612,2.47e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.29e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0.232401601740905,0,0,1.10799081706375,0,0.868043482863407,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,1.70763890732835,0.587237189370939,0.764546456250458,0,0.560508562981536,1.05353633910031,0.196709770113833,1.57204305099666,1.23360899399706,0.668745981562712,0.651844533267181,0,3.89653456815823,0.334231370655521,1.47302953737419,0,0.812411591295047,1.0247305578054,0.520237390239513,0.328875809207352,0.276350017785848,0,0.14828656316206,0.535081656179426,1.04535523804977,0.339928028092699,0,0.34362744548263,0,0.95569624297229,0,2.85135613334512,0.150575119077773,0.255973222308837,1.24930726552346,0.473554504088034,0.821127996921047,0.80642697289893,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,1.04574548582567,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,2.15627574859517,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,1.05836791361941,0,0.561594356226918,0.228234679033192,0.47003968731907,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,1.0077309914171,0,0,0,0,0,0,0,0,1.11136990144637,0,0.278304294485554,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0.344743373241465,0.291604613383254,0.173624994933292,0,0.361789315876224,1.52581736317083,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.208843899010911,0.202203398942031,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.426905989478705,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,1.60753148465019,0.962776056180637,2.9080823662043,0.2249738915515,0,0.121499113316049,0.335434687599266,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0.531459361253452,0.490696182767533,0,0,0,0.39997479170986,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0,0,0.33946505990805,0,0.371807292777007,0,0,0.157723490002507,0,0.352675943690684,0,0.0642292250964595,0,0.478901577171454,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.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| |||
|short_description=p17@KDM2B | |||
}} |
Latest revision as of 22:10, 16 September 2015
Short description: | p17@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_KDM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -342bp_to_ENST00000446152_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F8WBN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.77e-14 | 18 |
alpha-beta T cell | 5.77e-14 | 18 |
immature T cell | 5.77e-14 | 18 |
mature T cell | 5.77e-14 | 18 |
immature alpha-beta T cell | 5.77e-14 | 18 |
CD4-positive, alpha-beta T cell | 2.23e-11 | 6 |
natural killer cell | 5.59e-11 | 3 |
pro-NK cell | 5.59e-11 | 3 |
lymphoid lineage restricted progenitor cell | 5.98e-10 | 52 |
T cell | 6.50e-10 | 25 |
pro-T cell | 6.50e-10 | 25 |
lymphocyte | 9.80e-10 | 53 |
common lymphoid progenitor | 9.80e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.47e-08 | 4 |
breast cancer | 2.47e-08 | 4 |