FFCP PHASE1:Hg19::chr2:131100423..131100504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92856 | |EntrezGene=92856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30856 | |HGNC=30856 | ||
|TSSclassifier=strong | |||
|UniProt=B9A008,B8ZZ47,E7ENR5,F8WCN0,Q3ZTT3,Q96G21 | |UniProt=B9A008,B8ZZ47,E7ENR5,F8WCN0,Q3ZTT3,Q96G21 | ||
|association_with_transcript=0bp_to_ENST00000409649,ENST00000409935,ENST00000428740,ENST00000456713,ENST00000460766,ENST00000462392,ENST00000464432,ENST00000470672,ENST00000473689,ENST00000477375,ENST00000490895,ENST00000495606,NM_033416,uc002tra.1_5end | |association_with_transcript=0bp_to_ENST00000409649,ENST00000409935,ENST00000428740,ENST00000456713,ENST00000460766,ENST00000462392,ENST00000464432,ENST00000470672,ENST00000473689,ENST00000477375,ENST00000490895,ENST00000495606,NM_033416,uc002tra.1_5end | ||
|cluster_id=chr2:131100423..131100504,+ | |||
|description=CAGE_peak_1_at_IMP4_5end | |description=CAGE_peak_1_at_IMP4_5end | ||
|id=chr2:131100423..131100504,+ | |id=chr2:131100423..131100504,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.66e-12!246;CL:0002321!1.82e-12!248;CL:0000066!6.51e-11!254;CL:0000548!2.67e-10!679;CL:0000004!2.67e-10!679;CL:0000255!2.67e-10!679;CL:0000012!4.45e-10!682;CL:0000222!7.64e-07!119;CL:0000183!8.02e-07!59 | |ontology_enrichment_celltype=CL:0000220!1.66e-12!246;CL:0002321!1.82e-12!248;CL:0000066!6.51e-11!254;CL:0000548!2.67e-10!679;CL:0000004!2.67e-10!679;CL:0000255!2.67e-10!679;CL:0000012!4.45e-10!682;CL:0000222!7.64e-07!119;CL:0000183!8.02e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000497;9.22e-07;17!CL:0002518;9.22e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.10e-12,250;CL:0000066,6.10e-11,253;CL:0000222,5.07e-07,121;CL:1000497,9.57e-07,17;CL:0002518,9.57e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.33e-10!239;DOID:2531!6.80e-10!51;DOID:0060083!6.80e-10!51;DOID:162!1.37e-09!235;DOID:1240!1.01e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.33e-10,239;DOID:2531,6.80e-10,51;DOID:0060083,6.80e-10,51;DOID:162,1.37e-09,235;DOID:1240,1.01e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.40e-09!238;UBERON:0009142!2.40e-09!238;UBERON:0003914!4.16e-09!118;UBERON:0002100!1.76e-08!216;UBERON:0005256!1.03e-07!143;UBERON:0004290!1.49e-07!70;UBERON:0000486!5.91e-07!82;UBERON:0001637!5.96e-07!42;UBERON:0003509!5.96e-07!42;UBERON:0004572!5.96e-07!42 | |ontology_enrichment_uberon=UBERON:0003104!2.40e-09!238;UBERON:0009142!2.40e-09!238;UBERON:0003914!4.16e-09!118;UBERON:0002100!1.76e-08!216;UBERON:0005256!1.03e-07!143;UBERON:0004290!1.49e-07!70;UBERON:0000486!5.91e-07!82;UBERON:0001637!5.96e-07!42;UBERON:0003509!5.96e-07!42;UBERON:0004572!5.96e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.24e-07;24!UBERON:0011143;2.24e-07;24!UBERON:0006554;5.20e-07;30!UBERON:0001008;5.20e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.02e-10,199;UBERON:0007503,1.15e-09,78;UBERON:0003914,3.61e-09,117;UBERON:0003104,2.92e-08,160;UBERON:0009142,2.92e-08,160;UBERON:0000490,4.02e-08,148;UBERON:0002329,1.82e-07,71;UBERON:0003059,1.82e-07,71;UBERON:0007282,1.82e-07,71;UBERON:0004290,1.82e-07,71;UBERON:0009618,1.82e-07,71;UBERON:0003077,2.55e-07,72;UBERON:0007285,2.55e-07,72;UBERON:0005256,3.72e-07,122;UBERON:0001637,5.96e-07,42;UBERON:0003509,5.96e-07,42;UBERON:0004572,5.96e-07,42;UBERON:0000486,6.88e-07,83;UBERON:0007524,7.24e-07,73 | |||
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| ||
|short_description=p1@IMP4 | |short_description=p1@IMP4 | ||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p1@IMP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IMP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409649, ENST00000409935, ENST00000428740, ENST00000456713, ENST00000460766, ENST00000462392, ENST00000464432, ENST00000470672, ENST00000473689, ENST00000477375, ENST00000490895, ENST00000495606, NM_033416, uc002tra.1_5end |
EntrezGene: | IMP4 |
HGNC: | 30856 |
UniProt: | B9A008B8ZZ47E7ENR5F8WCN0Q3ZTT3Q96G21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.10e-12 | 250 |
epithelial cell | 6.10e-11 | 253 |
mesodermal cell | 5.07e-07 | 121 |
kidney cell | 9.57e-07 | 17 |
kidney epithelial cell | 9.57e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.02e-10 | 199 |
epithelial vesicle | 1.15e-09 | 78 |
epithelial tube | 3.61e-09 | 117 |
mesenchyme | 2.92e-08 | 160 |
entire embryonic mesenchyme | 2.92e-08 | 160 |
unilaminar epithelium | 4.02e-08 | 148 |
somite | 1.82e-07 | 71 |
presomitic mesoderm | 1.82e-07 | 71 |
presumptive segmental plate | 1.82e-07 | 71 |
dermomyotome | 1.82e-07 | 71 |
trunk paraxial mesoderm | 1.82e-07 | 71 |
paraxial mesoderm | 2.55e-07 | 72 |
presumptive paraxial mesoderm | 2.55e-07 | 72 |
trunk mesenchyme | 3.72e-07 | 122 |
artery | 5.96e-07 | 42 |
arterial blood vessel | 5.96e-07 | 42 |
arterial system | 5.96e-07 | 42 |
multilaminar epithelium | 6.88e-07 | 83 |
dense mesenchyme tissue | 7.24e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.33e-10 | 239 |
hematologic cancer | 6.80e-10 | 51 |
immune system cancer | 6.80e-10 | 51 |
cancer | 1.37e-09 | 235 |
leukemia | 1.01e-07 | 39 |