FFCP PHASE1:Hg19::chr16:53483921..53483928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |EntrezGene=5934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |HGNC=9894 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_uc010vgw.1_5end | |association_with_transcript=-47bp_to_uc010vgw.1_5end | ||
|cluster_id=chr16:53483921..53483928,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_14_at_RBL2_5end | |description=CAGE_peak_14_at_RBL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!1.36e-37!18;CL:0000789!1.36e-37!18;CL:0002420!1.36e-37!18;CL:0002419!1.36e-37!18;CL:0000790!1.36e-37!18;CL:0000625!7.07e-33!11;CL:0000084!6.74e-30!25;CL:0000827!6.74e-30!25;CL:0000838!1.75e-20!52;CL:0000542!5.26e-20!53;CL:0000051!5.26e-20!53;CL:0000624!9.30e-10!6;CL:0002087!4.38e-09!119;CL:0000738!9.54e-09!140 | |ontology_enrichment_celltype=CL:0000791!1.36e-37!18;CL:0000789!1.36e-37!18;CL:0002420!1.36e-37!18;CL:0002419!1.36e-37!18;CL:0000790!1.36e-37!18;CL:0000625!7.07e-33!11;CL:0000084!6.74e-30!25;CL:0000827!6.74e-30!25;CL:0000838!1.75e-20!52;CL:0000542!5.26e-20!53;CL:0000051!5.26e-20!53;CL:0000624!9.30e-10!6;CL:0002087!4.38e-09!119;CL:0000738!9.54e-09!140 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.68e-42;11!CL:0000791;2.38e-25;18!CL:0000789;2.38e-25;18!CL:0002419;2.38e-25;18!CL:0000084;4.48e-18;25 | |ontology_enrichment_celltype_v019=CL:0000625;7.68e-42;11!CL:0000791;2.38e-25;18!CL:0000789;2.38e-25;18!CL:0002419;2.38e-25;18!CL:0000084;4.48e-18;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.05e-42,11;CL:0000791,1.62e-25,18;CL:0000789,1.62e-25,18;CL:0002420,1.62e-25,18;CL:0002419,1.62e-25,18;CL:0000790,1.62e-25,18;CL:0000084,3.41e-18,25;CL:0000827,3.41e-18,25;CL:0000838,2.23e-08,52;CL:0000542,3.32e-08,53;CL:0000051,3.32e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.38e-25;18 | |ontology_enrichment_development_v019=CL:0000790;2.38e-25;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.10e-14!15;UBERON:0000179!2.10e-14!15;UBERON:0000463!2.10e-14!15 | |ontology_enrichment_uberon=UBERON:0000178!2.10e-14!15;UBERON:0000179!2.10e-14!15;UBERON:0000463!2.10e-14!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-10;15!UBERON:0000179;2.20e-10;15!UBERON:0000463;2.20e-10;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-10;15!UBERON:0000179;2.20e-10;15!UBERON:0000463;2.20e-10;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.22e-10,15;UBERON:0000179,2.22e-10,15;UBERON:0000463,2.22e-10,15 | |||
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|short_description=p14@RBL2 | |short_description=p14@RBL2 | ||
}} | }} |
Latest revision as of 22:44, 16 September 2015
Short description: | p14@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -47bp_to_uc010vgw.1_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.05e-42 | 11 |
mature alpha-beta T cell | 1.62e-25 | 18 |
alpha-beta T cell | 1.62e-25 | 18 |
immature T cell | 1.62e-25 | 18 |
mature T cell | 1.62e-25 | 18 |
immature alpha-beta T cell | 1.62e-25 | 18 |
T cell | 3.41e-18 | 25 |
pro-T cell | 3.41e-18 | 25 |
lymphoid lineage restricted progenitor cell | 2.23e-08 | 52 |
lymphocyte | 3.32e-08 | 53 |
common lymphoid progenitor | 3.32e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 2.22e-10 | 15 |
haemolymphatic fluid | 2.22e-10 | 15 |
organism substance | 2.22e-10 | 15 |