FFCP PHASE1:Hg19::chr11:16629205..16629216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=57bp_to_ENST00000525835_5end | |||
|cluster_id=chr11:16629205..16629216,- | |||
|description=CAGE_peak_16_at_SOX6_5end | |||
|id=chr11:16629205..16629216,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.56e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.31e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.40e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-26!82;UBERON:0002780!8.93e-26!41;UBERON:0001890!8.93e-26!41;UBERON:0006240!8.93e-26!41;UBERON:0005743!1.39e-25!86;UBERON:0003080!6.36e-25!42;UBERON:0000073!2.62e-24!94;UBERON:0001016!2.62e-24!94;UBERON:0001049!9.17e-23!57;UBERON:0005068!9.17e-23!57;UBERON:0006241!9.17e-23!57;UBERON:0007135!9.17e-23!57;UBERON:0000924!3.15e-22!173;UBERON:0006601!3.15e-22!173;UBERON:0001893!4.00e-22!34;UBERON:0002346!4.38e-22!90;UBERON:0007023!4.05e-21!115;UBERON:0000955!4.34e-21!69;UBERON:0006238!4.34e-21!69;UBERON:0002791!5.63e-21!33;UBERON:0001869!5.14e-20!32;UBERON:0002020!5.29e-20!34;UBERON:0003528!5.29e-20!34;UBERON:0002616!6.12e-20!59;UBERON:0004121!3.33e-19!169;UBERON:0003075!1.92e-18!86;UBERON:0007284!1.92e-18!86;UBERON:0000956!1.60e-16!25;UBERON:0000203!1.60e-16!25;UBERON:0003056!3.14e-16!61;UBERON:0000033!1.64e-13!123;UBERON:0001950!2.24e-13!20;UBERON:0002619!2.75e-13!22;UBERON:0000153!3.99e-13!129;UBERON:0007811!3.99e-13!129;UBERON:0001872!2.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.44e-20;4!UBERON:0000923;4.44e-20;4!UBERON:0010316;4.44e-20;4!UBERON:0005291;4.44e-20;4!UBERON:0002050;3.45e-16;5!UBERON:0005423;3.45e-16;5!UBERON:0000922;2.42e-15;49!UBERON:0007029;7.54e-10;1!UBERON:0001389;7.54e-10;1!UBERON:0000026;7.54e-10;1!UBERON:0008784;7.54e-10;1!UBERON:0006058;7.54e-10;1!UBERON:0003663;7.54e-10;1!UBERON:0004256;7.54e-10;1!UBERON:0004708;7.54e-10;1!UBERON:0002101;7.54e-10;1!UBERON:0004709;7.54e-10;1!UBERON:0002529;7.54e-10;1!UBERON:0010538;7.54e-10;1!UBERON:0003661;7.54e-10;1!UBERON:0010890;7.54e-10;1!UBERON:0002471;7.54e-10;1!UBERON:0001383;7.54e-10;1!UBERON:0010758;7.54e-10;1!UBERON:0010707;7.54e-10;1!UBERON:0000978;7.54e-10;1!UBERON:0002103;7.54e-10;1!UBERON:0001665;7.54e-10;1!UBERON:0003823;7.54e-10;1!UBERON:0000154;7.54e-10;1!UBERON:0010709;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.30e-10,1;UBERON:0001389,5.30e-10,1;UBERON:0000026,5.30e-10,1;UBERON:0008784,5.30e-10,1;UBERON:0006058,5.30e-10,1;UBERON:0003663,5.30e-10,1;UBERON:0004256,5.30e-10,1;UBERON:0004708,5.30e-10,1;UBERON:0002101,5.30e-10,1;UBERON:0004709,5.30e-10,1;UBERON:0002529,5.30e-10,1;UBERON:0010538,5.30e-10,1;UBERON:0003661,5.30e-10,1;UBERON:0010890,5.30e-10,1;UBERON:0002471,5.30e-10,1;UBERON:0001383,5.30e-10,1;UBERON:0004357,5.30e-10,1;UBERON:0004347,5.30e-10,1;UBERON:0005420,5.30e-10,1;UBERON:0005732,5.30e-10,1;UBERON:0010758,5.30e-10,1;UBERON:0010707,5.30e-10,1;UBERON:0000978,5.30e-10,1;UBERON:0002103,5.30e-10,1;UBERON:0001665,5.30e-10,1;UBERON:0003823,5.30e-10,1;UBERON:0000154,5.30e-10,1;UBERON:0010709,5.30e-10,1;UBERON:0005733,5.30e-10,1;UBERON:0005730,5.30e-10,1;UBERON:0007029,8.24e-10,1;UBERON:0004121,2.49e-07,171;UBERON:0000924,2.49e-07,171;UBERON:0006601,2.49e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.717558542755448,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,2.7950408664471,2.60279707715243,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.241192877250816,0,0,0,0,0,0.41827123283581,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0.640358984218058,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.18628920882415,0,0.124980407962107,0,0.570930667089935,0,0,1.01444720027578,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,7.5054556981224,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,4.58277830875868,1.48802444071178,1.36329340684902,0.558644917973244,0,0,0,0,3.3687002508852,0.192687675289379,0,0.159633859057151,0.205116364240755,3.52900374710405,0.276629009856872,0,0,0,0.11796972334774,1.10057159113007,0.115525666150338,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0.540300676947157,0.781078098613847,0.206686796501184,0.19024743058172,7.11067251723685,0,0.496211178389294,0.351742488719241,0.383287282918786,0,0.336283722218824,0,0.455324382702595,0,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.142953088353313,0.158013611732727,0,3.30330717374901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,1.94228651156368,0.923965261706223,10.4383298820438,1.45713297917742,2.10545517115895,0,0,0,0,0.150962843566674,0.0771741581079447,0.437119121007915,0,0,0,0.392616934229891,0,2.9585900930838,0.509781344063451,0,0,0,0,0,0,0,0,0.286679166302903,0,0.271965960763659,4.36350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.413731983447581,0,1.90451545170992,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p16@SOX6 | |||
}} |
Latest revision as of 23:13, 16 September 2015
Short description: | p16@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.30e-10 | 1 |
soleus muscle | 5.30e-10 | 1 |
appendage | 5.30e-10 | 1 |
lower limb segment | 5.30e-10 | 1 |
multi-limb segment region | 5.30e-10 | 1 |
hindlimb muscle | 5.30e-10 | 1 |
hindlimb zeugopod muscle | 5.30e-10 | 1 |
paired limb/fin | 5.30e-10 | 1 |
limb | 5.30e-10 | 1 |
pelvic appendage | 5.30e-10 | 1 |
limb segment | 5.30e-10 | 1 |
paired limb/fin segment | 5.30e-10 | 1 |
limb muscle | 5.30e-10 | 1 |
pelvic complex muscle | 5.30e-10 | 1 |
zeugopod | 5.30e-10 | 1 |
muscle of leg | 5.30e-10 | 1 |
paired limb/fin bud | 5.30e-10 | 1 |
limb bud | 5.30e-10 | 1 |
pelvic appendage bud | 5.30e-10 | 1 |
limb/fin field | 5.30e-10 | 1 |
subdivision of organism along appendicular axis | 5.30e-10 | 1 |
appendage girdle complex | 5.30e-10 | 1 |
leg | 5.30e-10 | 1 |
hindlimb | 5.30e-10 | 1 |
triceps surae | 5.30e-10 | 1 |
hindlimb zeugopod | 5.30e-10 | 1 |
posterior region of body | 5.30e-10 | 1 |
pelvic complex | 5.30e-10 | 1 |
limb field | 5.30e-10 | 1 |
hindlimb/pelvic fin field | 5.30e-10 | 1 |
surface | 8.24e-10 | 1 |
ectoderm-derived structure | 2.49e-07 | 171 |
ectoderm | 2.49e-07 | 171 |
presumptive ectoderm | 2.49e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.40e-08 | 10 |