FFCP PHASE1:Hg19::chr3:182987036..182987040,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYG0 | |UniProt=Q9BYG0 | ||
|association_with_transcript=-89bp_to_AF368169_5end | |association_with_transcript=-89bp_to_AF368169_5end | ||
|cluster_id=chr3:182987036..182987040,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_15_at_B3GNT5_5end | |description=CAGE_peak_15_at_B3GNT5_5end | ||
|id=chr3:182987036..182987040,+ | |id=chr3:182987036..182987040,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.70e-24!42;CL:0000557!1.03e-23!71;CL:0000860!6.04e-23!45;CL:0000766!1.70e-22!76;CL:0000839!9.74e-22!70;CL:0002009!2.16e-21!65;CL:0002194!5.17e-20!63;CL:0000576!5.17e-20!63;CL:0000040!5.17e-20!63;CL:0000559!5.17e-20!63;CL:0000763!1.12e-17!112;CL:0000049!1.12e-17!112;CL:0000738!1.70e-08!140;CL:0002031!4.19e-07!124;CL:0000037!7.18e-07!172;CL:0000566!7.18e-07!172 | |ontology_enrichment_celltype=CL:0002057!1.70e-24!42;CL:0000557!1.03e-23!71;CL:0000860!6.04e-23!45;CL:0000766!1.70e-22!76;CL:0000839!9.74e-22!70;CL:0002009!2.16e-21!65;CL:0002194!5.17e-20!63;CL:0000576!5.17e-20!63;CL:0000040!5.17e-20!63;CL:0000559!5.17e-20!63;CL:0000763!1.12e-17!112;CL:0000049!1.12e-17!112;CL:0000738!1.70e-08!140;CL:0002031!4.19e-07!124;CL:0000037!7.18e-07!172;CL:0000566!7.18e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-59;33!CL:0002057;3.48e-59;33!CL:0000473;3.43e-44;39!CL:0000234;3.43e-44;39!CL:0000576;4.31e-27;48!CL:0000766;1.65e-17;69!CL:0000763;1.62e-12;100!CL:0002087;1.71e-08;104!CL:0000775;5.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.32e-51,42;CL:0002057,3.32e-51,42;CL:0000473,2.74e-48,48;CL:0000234,2.74e-48,48;CL:0002194,1.84e-37,59;CL:0000576,1.84e-37,59;CL:0000040,1.84e-37,59;CL:0000559,1.84e-37,59;CL:0002009,4.58e-36,61;CL:0000766,1.41e-35,72;CL:0000839,6.12e-33,66;CL:0000557,2.27e-32,67;CL:0000763,7.74e-26,108;CL:0000049,7.74e-26,108;CL:0002087,3.07e-18,115;CL:0000738,1.44e-17,136;CL:0002031,1.13e-15,120;CL:0000037,1.23e-15,168;CL:0002032,3.10e-15,161;CL:0000837,3.10e-15,161;CL:0000988,1.66e-14,177;CL:0000775,4.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-39;42!CL:0000049;8.04e-09;108 | |||
|ontology_enrichment_disease=DOID:1749!2.69e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.71e-21!80;UBERON:0001474!3.22e-19!86;UBERON:0004765!3.78e-17!101;UBERON:0001434!3.78e-17!101;UBERON:0002390!1.39e-16!102;UBERON:0003061!1.39e-16!102;UBERON:0002193!8.74e-15!112;UBERON:0002405!3.46e-12!115;UBERON:0000062!7.39e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.02e-30,76;UBERON:0001474,8.69e-28,82;UBERON:0004765,8.12e-25,90;UBERON:0002390,2.16e-24,98;UBERON:0003061,2.16e-24,98;UBERON:0002405,7.81e-24,93;UBERON:0001434,9.08e-22,100;UBERON:0002193,1.38e-21,108;UBERON:0002204,9.25e-11,167;UBERON:0003081,9.56e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,0.755751887377619,0.242584061187816,2.55671940596253,1.6446715520873,1.85823822537062,7.19230980805376,2.0492856522328,1.41889337933151,9.3081333798887,5.80936215225443,0,1.31769637679823,0.272906150057846,0.224723484445085,8.87643287875617,2.24650318953266,3.19668562899521,1.9791078011203,2.19410023383795,0.426224750532694,5.80418477257168,0.56738522469114,1.24564449799115,11.8086872670669,7.30076085788282,1.73751075764093,4.23779651843358,1.84138817993782,1.26584954976354,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,1.63323337003915,0.368502951935304,0.723280468230358,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0,0,0,1.02090169995667,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,1.29848776109822,0.561594356226918,0,0,7.51903431270201,0,0,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,3.40140231883657,0.511572370226872,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.762760950878299,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,1.84451123510448,0.0897576444097721,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,4.27721101453538,0.593042257361244,0,0,0.269604531922708,0,0,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,0,0.992975867626496,0,1.19472429772959,0,0,0,1.27390116638691,0.0870592065804026,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0.548167698587004,0,0.126621591911757,0.391102765469606,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.121499113316049,1.0063040627978,0,0,0.105600336519406,0.179287339332845,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.314108192500469,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0.643324774124777,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.746842107858986,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0.637724760305049,1.98297222814403,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.490738592505128,0.353909170043221,2.20114318226015,0.462102664601353,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0.523813388962845,0.327543835020193,0.739280431085226,0.0675375846183947,0,0.206686796501184,0,1.09394961803644,0.548257766857182,0.992422356778588,0.527613733078862,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0,0,0,0,0.913158720509496,0,1.43325506366115,0,0,0,0.173858272302579,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0.22910686854405,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0.150962843566674,0.926089897295336,0.655678681511872,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,2.14264726326789,1.41157948686277,0.561689566824178,0,1.37618785021362,0.286679166302903,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0.325613074443898,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,0.755751887377619,0.242584061187816,2.55671940596253,1.6446715520873,1.85823822537062,7.19230980805376,2.0492856522328,1.41889337933151,9.3081333798887,5.80936215225443,0,1.31769637679823,0.272906150057846,0.224723484445085,8.87643287875617,2.24650318953266,3.19668562899521,1.9791078011203,2.19410023383795,0.426224750532694,5.80418477257168,0.56738522469114,1.24564449799115,11.8086872670669,7.30076085788282,1.73751075764093,4.23779651843358,1.84138817993782,1.26584954976354,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,1.63323337003915,0.368502951935304,0.723280468230358,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0,0,0,1.02090169995667,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,1.29848776109822,0.561594356226918,0,0,7.51903431270201,0,0,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,3.40140231883657,0.511572370226872,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.762760950878299,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,1.84451123510448,0.0897576444097721,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,4.27721101453538,0.593042257361244,0,0,0.269604531922708,0,0,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,0,0.992975867626496,0,1.19472429772959,0,0,0,1.27390116638691,0.0870592065804026,0.34945333648406,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0.548167698587004,0,0.126621591911757,0.391102765469606,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.121499113316049,1.0063040627978,0,0,0.105600336519406,0.179287339332845,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.314108192500469,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0.643324774124777,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.746842107858986,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0.637724760305049,1.98297222814403,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.490738592505128,0.353909170043221,2.20114318226015,0.462102664601353,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0.523813388962845,0.327543835020193,0.739280431085226,0.0675375846183947,0,0.206686796501184,0,1.09394961803644,0.548257766857182,0.992422356778588,0.527613733078862,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0,0,0,0,0.913158720509496,0,1.43325506366115,0,0,0,0.173858272302579,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0.22910686854405,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0.150962843566674,0.926089897295336,0.655678681511872,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,2.14264726326789,1.41157948686277,0.561689566824178,0,1.37618785021362,0.286679166302903,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0.325613074443898,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | ||
|short_description=p15@B3GNT5 | |short_description=p15@B3GNT5 | ||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p15@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_B3GNT5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -89bp_to_AF368169_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | Q9BYG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.32e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-51 | 42 |
defensive cell | 2.74e-48 | 48 |
phagocyte | 2.74e-48 | 48 |
monopoietic cell | 1.84e-37 | 59 |
monocyte | 1.84e-37 | 59 |
monoblast | 1.84e-37 | 59 |
promonocyte | 1.84e-37 | 59 |
macrophage dendritic cell progenitor | 4.58e-36 | 61 |
myeloid leukocyte | 1.41e-35 | 72 |
myeloid lineage restricted progenitor cell | 6.12e-33 | 66 |
granulocyte monocyte progenitor cell | 2.27e-32 | 67 |
myeloid cell | 7.74e-26 | 108 |
common myeloid progenitor | 7.74e-26 | 108 |
nongranular leukocyte | 3.07e-18 | 115 |
leukocyte | 1.44e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.13e-15 | 120 |
hematopoietic stem cell | 1.23e-15 | 168 |
hematopoietic oligopotent progenitor cell | 3.10e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.10e-15 | 161 |
hematopoietic cell | 1.66e-14 | 177 |
neutrophil | 4.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.02e-30 | 76 |
bone element | 8.69e-28 | 82 |
skeletal element | 8.12e-25 | 90 |
hematopoietic system | 2.16e-24 | 98 |
blood island | 2.16e-24 | 98 |
immune system | 7.81e-24 | 93 |
skeletal system | 9.08e-22 | 100 |
hemolymphoid system | 1.38e-21 | 108 |
musculoskeletal system | 9.25e-11 | 167 |
lateral plate mesoderm | 9.56e-09 | 203 |