FFCP PHASE1:Hg19::chr2:3383544..3383565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51112 | |EntrezGene=51112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24284 | |HGNC=24284 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENST00000482645_5end | |association_with_transcript=53bp_to_ENST00000482645_5end | ||
|cluster_id=chr2:3383544..3383565,+ | |||
|description=CAGE_peak_3_at_TRAPPC12_5end | |description=CAGE_peak_3_at_TRAPPC12_5end | ||
|id=chr2:3383544..3383565,+ | |id=chr2:3383544..3383565,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000766!2.93e-09!76;CL:0000988!5.85e-09!182;CL:0002009!3.54e-08!65;CL:0000557!7.85e-08!71;CL:0000738!9.05e-08!140;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0002032!1.77e-07!165;CL:0000837!1.77e-07!165 | |ontology_enrichment_celltype=CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000766!2.93e-09!76;CL:0000988!5.85e-09!182;CL:0002009!3.54e-08!65;CL:0000557!7.85e-08!71;CL:0000738!9.05e-08!140;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0002032!1.77e-07!165;CL:0000837!1.77e-07!165 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.66e-10,72;CL:0000763,4.89e-10,108;CL:0000049,4.89e-10,108;CL:0000988,1.84e-09,177;CL:0002009,4.44e-09,61;CL:0000557,1.17e-08,67;CL:0002194,1.59e-08,59;CL:0000576,1.59e-08,59;CL:0000040,1.59e-08,59;CL:0000559,1.59e-08,59;CL:0000738,2.91e-08,136;CL:0000037,4.16e-08,168;CL:0002032,6.21e-08,161;CL:0000837,6.21e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.86e-13!102;UBERON:0003061!8.86e-13!102;UBERON:0002193!3.65e-12!112;UBERON:0003081!2.62e-09!216;UBERON:0002371!8.54e-09!80;UBERON:0002405!1.10e-08!115;UBERON:0001474!5.20e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.67e-14,98;UBERON:0003061,9.67e-14,98;UBERON:0002193,4.80e-13,108;UBERON:0002405,1.39e-10,93;UBERON:0002371,1.26e-09,76;UBERON:0003081,4.67e-09,203;UBERON:0001474,9.70e-09,82;UBERON:0004765,4.13e-07,90 | |||
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| ||
|short_description=p3@TRAPPC12 | |short_description=p3@TRAPPC12 | ||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p3@TRAPPC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAPPC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000482645_5end |
EntrezGene: | TRAPPC12 |
HGNC: | 24284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.66e-10 | 72 |
myeloid cell | 4.89e-10 | 108 |
common myeloid progenitor | 4.89e-10 | 108 |
hematopoietic cell | 1.84e-09 | 177 |
macrophage dendritic cell progenitor | 4.44e-09 | 61 |
granulocyte monocyte progenitor cell | 1.17e-08 | 67 |
monopoietic cell | 1.59e-08 | 59 |
monocyte | 1.59e-08 | 59 |
monoblast | 1.59e-08 | 59 |
promonocyte | 1.59e-08 | 59 |
leukocyte | 2.91e-08 | 136 |
hematopoietic stem cell | 4.16e-08 | 168 |
hematopoietic oligopotent progenitor cell | 6.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.21e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.67e-14 | 98 |
blood island | 9.67e-14 | 98 |
hemolymphoid system | 4.80e-13 | 108 |
immune system | 1.39e-10 | 93 |
bone marrow | 1.26e-09 | 76 |
lateral plate mesoderm | 4.67e-09 | 203 |
bone element | 9.70e-09 | 82 |
skeletal element | 4.13e-07 | 90 |