FFCP PHASE1:Hg19::chr17:685581..685621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55178 | |EntrezGene=55178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18485 | |HGNC=18485 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC36 | |UniProt=Q9HC36 | ||
|association_with_transcript=68bp_to_ENST00000304478,NM_018146,uc002frw.2_5end | |association_with_transcript=68bp_to_ENST00000304478,NM_018146,uc002frw.2_5end | ||
|cluster_id=chr17:685581..685621,+ | |||
|description=CAGE_peak_1_at_RNMTL1_5end | |description=CAGE_peak_1_at_RNMTL1_5end | ||
|id=chr17:685581..685621,+ | |id=chr17:685581..685621,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.24e-17!52;CL:0000542!2.80e-16!53;CL:0000051!2.80e-16!53;CL:0000084!7.51e-09!25;CL:0000827!7.51e-09!25;CL:0000791!4.04e-08!18;CL:0000789!4.04e-08!18;CL:0002420!4.04e-08!18;CL:0002419!4.04e-08!18;CL:0000790!4.04e-08!18;CL:0000945!5.18e-08!24;CL:0000826!5.18e-08!24 | |ontology_enrichment_celltype=CL:0000838!3.24e-17!52;CL:0000542!2.80e-16!53;CL:0000051!2.80e-16!53;CL:0000084!7.51e-09!25;CL:0000827!7.51e-09!25;CL:0000791!4.04e-08!18;CL:0000789!4.04e-08!18;CL:0002420!4.04e-08!18;CL:0002419!4.04e-08!18;CL:0000790!4.04e-08!18;CL:0000945!5.18e-08!24;CL:0000826!5.18e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.47e-10;53!CL:0000084;9.73e-09;25!CL:0000791;4.17e-08;18!CL:0000789;4.17e-08;18!CL:0002419;4.17e-08;18!CL:0000945;4.24e-08;24!CL:0000236;3.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.24e-17,52;CL:0000542,2.80e-16,53;CL:0000051,2.80e-16,53;CL:0000084,7.51e-09,25;CL:0000827,7.51e-09,25;CL:0000791,4.04e-08,18;CL:0000789,4.04e-08,18;CL:0002420,4.04e-08,18;CL:0002419,4.04e-08,18;CL:0000790,4.04e-08,18;CL:0000945,5.18e-08,24;CL:0000826,5.18e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.47e-10;53!CL:0000790;4.17e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!9.37e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,7.20e-07,47 | |||
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4082,20.5288642633023,10.3778247642609,9.61991780937353,9.7171718535629,11.6485635949738,17.6856004415661,10.5729029246317,36.9592113368778,8.01588202515337,12.8071796843612,12.3881957940921,19.019935064342,18.6694651750443,8.92293988882216,30.827726769464,6.95814199166422,9.89914945390541,8.96967760085853,9.10044762917299,10.9138092870864,11.2690730061592,6.60462317580768,9.58337652243951,45.98877170411,11.6036669183388,21.0309883423452,11.4505784521624,13.9787858647127,7.89660327034495,10.9823450274445,12.4475553959606,16.0683449358148,12.2945754650709,6.84569778730567,19.8043114196672,15.4415037322158,18.296320560619,16.042043437296,11.0238779296519,29.1276262306299,9.54275627771164,9.53423842781029,12.8602518772015,14.9917985890985,19.5256958873717,24.0722063960106,40.2377016370134,10.8134210851284,27.8410790707391,9.53549058320298,11.6449185659696,13.2000420649258,23.4866414526027,15.928961377514,22.1555551175744,9.26928758511604,24.1555110772012,11.9459912385817,17.2844298240254,9.14444608306346,31.1298498062467,20.9335927910814,10.7344453724816,17.3367500025792,20.2242082475754,13.2506888912221,9.04980694530854,10.5786081394152,12.1471654897874,14.8011154686501,5.55294545352012,4.87333345808964,9.94173732833269,13.8926486107346,9.88058159489721,7.79472629637734,13.4051664131738,18.4966053145621,12.0331149130896,14.0918965311192,12.1312873362628,9.58029987126429,14.1770908794718,6.83347083450994,11.267183763585,8.60113793535107,9.42896938063245,9.93542447062135,10.3761476202173,6.74894202995376,18.956139692706,6.85116800507922,9.64589860762504,25.2900849135716,15.3616290327475,12.2388938367237,7.71253922495841,12.2057289530575,10.606568295405,11.0689876771133,12.4573571023515,9.84012294106771,14.0644759099812,13.3675992501191,10.2020053492847,8.60202542683993,8.54625913110849,6.83157010255541,7.05000553329454,5.84851772027589,6.26094074174081,6.91185001387205,9.13932509205109,8.54428539729789,9.45613027853309,6.87427565071926,12.5289115167193,8.75810955136955,13.6009439985472,8.58489262956982,11.1127331292753,10.0947918582921,11.7498096548455,9.43543002049673,7.30784017502592,8.16141331844181,13.1967810364585,19.5789363605174,12.3571300346226,8.02883762618528,11.1834865285141,15.3719556972917,10.0315299900876,19.0904957937972,14.0932835223371,19.6895294786783,13.3698380718048,11.1989333282902,7.20983142705737,10.4963223847557,8.99609668407143,15.7252727446278,8.35627889762646,10.77691829129,17.7988782310888,7.14834588950744,14.2938433118477,15.8904466998714,22.0927140302209,14.9671073259806,10.5753134205605,20.4630994085843,14.6641743499487,25.6343485225111,9.71965779908924,29.0242626221383,13.1796450463043,15.4919705323753,19.5525721290635,6.99609571437521,14.0373906102231,40.0285374142735,7.40619481750436,7.65613693383001,11.882406642845,7.08482881627925,10.0569331206005,12.1018654902045,12.6035848110859,11.756732918917,9.68853873791107,7.13847101295772,7.94996519858308,8.72975952773279,8.80457272904059,12.2457206119359,6.10211352747467,17.2589981515025,8.75231377311609,10.3790253121975,7.0596774046232,19.5378502808273,10.4762677792569,15.8858759984794,6.65352387976704,10.4683256158512,10.9350933805939,12.8145813830734,10.6538561125763,13.1273954164373,6.030835435429,14.8863353516788,14.9490557705678,48.0386727924878,9.64263304580916,9.07966049990825,7.28358725083958,11.3831095675649,7.45099909366166,7.02927324090253,5.83059232087223,12.1665822028529,12.628372524067,13.4740978607724,13.1253054232642,10.2825951634173,13.9832875025242,5.88571542958957,10.9579046461139,12.3078726994614,3.8220135030964,9.22047419878867,19.7517014665908,17.7849380813232,13.3870869672986,10.4222477414933,11.189672864804,12.2917303507644,17.9727512071664,14.6277301998894,13.3715160825539,15.2531994518892,10.5846762547732,5.72767171360125,6.82454048461504,4.77769469488717,8.94843454382339,14.526234575056,9.50959814861701,38.1983013940858,19.7112589163994,17.397216470073,14.085618798715,12.8666704904158,16.9108158887163,17.4812533443026,13.2146915985583,13.7425645931786,9.51065914470043,8.33480907565802,8.52382285965433,10.817297816315,10.296229513664,23.331978163061,5.49663707921847,6.53502080719589,13.5249832826688,9.85577265189338,10.902134485663,10.9578409555081,13.2921737380155,11.6060060093677,5.64631794745107,28.6461679080331,15.3370641531769,14.6793370689453,11.8971854015705,12.3061818510684,13.1903490970375,13.9632220908921,6.87734892670021,8.55588541783528,11.5543907157855,13.8440499879613,13.4998074573534,23.7106291161219,9.75578457788065,17.3381010561369,11.7575658316847,9.92464914976325,21.5608483791443,24.703855619146,28.9401260568673,10.7792027129641,11.4810625406704,10.4484651131481,13.5696725934332,11.8197704999891,8.19386228705324,26.0145921187023,11.201899856957,9.29739069207809,15.2401723527873,16.4271984520935,11.0457366943924,8.75010905790652,10.3124710529264,8.9543595472072,9.71218847487211,15.4457825829552,7.72496738116647,14.0784565442073,10.6350056439094,12.2068853494722,11.9836219353392,10.66751106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| ||
|short_description=p1@RNMTL1 | |short_description=p1@RNMTL1 | ||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p1@RNMTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNMTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000304478, NM_018146, uc002frw.2_5end |
EntrezGene: | RNMTL1 |
HGNC: | 18485 |
UniProt: | Q9HC36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.24e-17 | 52 |
lymphocyte | 2.80e-16 | 53 |
common lymphoid progenitor | 2.80e-16 | 53 |
T cell | 7.51e-09 | 25 |
pro-T cell | 7.51e-09 | 25 |
mature alpha-beta T cell | 4.04e-08 | 18 |
alpha-beta T cell | 4.04e-08 | 18 |
immature T cell | 4.04e-08 | 18 |
mature T cell | 4.04e-08 | 18 |
immature alpha-beta T cell | 4.04e-08 | 18 |
lymphocyte of B lineage | 5.18e-08 | 24 |
pro-B cell | 5.18e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 7.20e-07 | 47 |