FFCP PHASE1:Hg19::chr17:685581..685621,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:685581..685621,+ to FFCP PHASE1:Hg19::chr17:685581..685621,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55178 | |EntrezGene=55178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18485 | |HGNC=18485 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC36 | |UniProt=Q9HC36 | ||
|association_with_transcript=68bp_to_ENST00000304478,NM_018146,uc002frw.2_5end | |||
|cluster_id=chr17:685581..685621,+ | |||
|description=CAGE_peak_1_at_RNMTL1_5end | |||
|id=chr17:685581..685621,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.24e-17!52;CL:0000542!2.80e-16!53;CL:0000051!2.80e-16!53;CL:0000084!7.51e-09!25;CL:0000827!7.51e-09!25;CL:0000791!4.04e-08!18;CL:0000789!4.04e-08!18;CL:0002420!4.04e-08!18;CL:0002419!4.04e-08!18;CL:0000790!4.04e-08!18;CL:0000945!5.18e-08!24;CL:0000826!5.18e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.47e-10;53!CL:0000084;9.73e-09;25!CL:0000791;4.17e-08;18!CL:0000789;4.17e-08;18!CL:0002419;4.17e-08;18!CL:0000945;4.24e-08;24!CL:0000236;3.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.24e-17,52;CL:0000542,2.80e-16,53;CL:0000051,2.80e-16,53;CL:0000084,7.51e-09,25;CL:0000827,7.51e-09,25;CL:0000791,4.04e-08,18;CL:0000789,4.04e-08,18;CL:0002420,4.04e-08,18;CL:0002419,4.04e-08,18;CL:0000790,4.04e-08,18;CL:0000945,5.18e-08,24;CL:0000826,5.18e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.47e-10;53!CL:0000790;4.17e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!9.37e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,7.20e-07,47 | |||
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|phase1_expression=9.08391896352783,13.06013195735,6.62485699251064,8.00586386825043,12.9618717383913,10.4680622892044,12.6649939084155,24.0053551902196,19.0665508585882,15.2355040630935,23.0274385430901,10.7036272343784,8.96807725976742,13.9855978844853,15.90707403494,11.4295274896802,8.43772339233568,10.2243412654232,10.2465887746006,10.465289936527,12.8520435483879,13.1650983020797,9.73202356245593,12.3186982565596,12.4287213198855,20.4787927404509,22.4955615092851,22.7474157996533,15.7345710739562,18.039981710569,17.4942219347166,22.0661093874943,18.3735610454733,12.201882335504,20.2189393514587,19.903692548239,24.6624369041272,20.4978301156795,17.6479113773725,19.096956622995,9.40444991807682,8.09734165047449,7.21211589375722,4.9435401185052,7.55751887377619,9.70336244751265,5.11343881192506,7.40102198439286,4.95530193432166,3.74000110018796,6.40401766322752,6.14853797710322,6.55016793399575,6.45484683583826,6.77132432971709,5.45902784673554,7.91427835167753,8.53949240891322,2.75475503133812,3.20929027076094,5.11469700639233,6.26717470354761,6.38283704389222,5.11469700639233,2.03146467040009,4.53908179752912,6.85104473895132,5.27622197039161,5.21482918420201,7.60160956467908,4.84319602106695,3.68277635987565,7.27863491114034,15.4216359007718,12.7562579979026,17.820984868212,15.8383369916558,17.2703426767732,10.9293398954014,19.9508920618874,17.1068342391217,14.7957964549353,28.1593991138116,19.6609900054367,29.3538053774973,21.3365111283254,14.0138595462604,21.2658402783159,25.7807500386096,21.9432363543134,33.5835651774575,29.3618594685469,27.9059456531417,21.1474125726441,21.8598339562799,21.5974949515563,33.8340804595793,42.838173139659,30.6346233509269,17.3873955206305,50.1920290615729,49.712019602147,40.9136129656614,10.249762033436,30.0498025624334,29.9070757687889,21.6643091012012,9.22257502024861,14.6967062742662,11.18177751305,19.3445012450094,14.2003512010176,29.9538857587362,30.767195230317,29.2699466653935,12.2374090113371,36.4059468921825,29.5519603115062,21.0006344376187,21.3438827597145,18.2303367079797,24.7117531556577,17.6172889320994,10.6228887258167,17.4903017173284,14.680189626729,17.243687935342,26.2088766192152,29.6858617319693,39.2474134522385,14.6284119788377,19.4503249314054,12.1469433751354,6.14446559053763,7.52006865953834,8.40109809972778,13.5198610998687,12.6525066278685,8.31906391043797,10.1995522832779,8.34430464084697,17.6821751921912,13.8432209551166,20.763928795928,12.332800958878,9.92539502605823,14.6253756570752,23.3720811819235,28.5997455390064,32.6882601170017,22.8576768471711,19.7853956874409,18.7455870868101,20.3510859092643,20.5554723742854,18.1577907680445,21.1084916202179,10.5950871259425,8.53839030448104,7.02913286805807,7.65375702507379,12.9246257972147,11.7149787623121,9.55924008899259,18.6332648012805,13.0377603294756,16.6151735743366,16.779110592015,29.1301611185178,20.8838445104988,20.8849988080664,5.27121669744253,3.87780264148325,13.9550096685611,6.95760732373446,8.61087479319142,7.81214166797991,10.8997915884549,12.7680617591409,7.8494864019923,12.8098794875646,12.5800449692752,9.64754209739275,9.42974704487816,11.1154094117152,9.08144565869588,11.5235184896,18.2770716830361,15.608003841516,25.1007601479558,19.8766745133895,12.0957533603078,15.2160567706044,11.9383185696911,11.8409419327838,15.354289663971,12.3990937410919,14.2560342873846,8.15980866619238,12.7422590671324,8.62341770179486,12.793544660509,10.509955669245,8.03485934904131,8.77955241761676,6.12975591598039,10.5166641234618,13.0447010634024,5.91985797773244,7.04739383101272,7.62954844174423,8.70264178644767,6.69841440049853,9.27505944164265,4.65292140828975,11.8143432568886,7.60008640257349,14.3887251319145,8.37654077644924,6.62748832957129,5.32514388774922,5.33986120606493,9.15627198476633,10.6293469239813,10.9098448236334,7.7437240755031,14.3928973232923,12.1927386855766,15.2214065159069,14.4088866471365,13.3730050964083,14.964071722109,10.9514672630871,9.64861407289328,13.8134921352481,6.03678306441573,14.4375896333917,28.6302456096422,26.2992116521839,25.3061581377656,26.1396715375774,23.0952210737951,27.9979330551094,27.2359242483532,28.0596695129245,26.1628066723545,14.0249536378683,21.0362660705169,12.347220339942,10.2906097969879,12.6755034821831,15.725235466842,27.767125614026,16.7755977777567,8.60919069801795,8.7499583252248,6.58501712451753,13.4882103909143,11.0581869652794,12.2216747609259,18.8968817079988,16.6389565644733,4.3299402607582,9.04257158805599,7.39674773685676,12.9929802984966,15.7415074276048,12.1762657430143,28.4473583265339,23.1791263765616,6.15542515218493,8.19014927987332,9.66102554876734,14.0600750980165,6.2153387433578,6.66342957039216,14.5084806778614,10.4628217865026,23.3863434290779,13.7945706610864,8.4526496652697,11.1957182392017,9.51191692551945,12.7504857760644,11.6836125497591,13.3695948945397,19.926966025708,22.2394179829517,13.4704015441354,12.3140653716006,14.0054951988983,12.5586814466804,7.41132117016576,11.807464017173,7.75630294546667,10.7296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4082,20.5288642633023,10.3778247642609,9.61991780937353,9.7171718535629,11.6485635949738,17.6856004415661,10.5729029246317,36.9592113368778,8.01588202515337,12.8071796843612,12.3881957940921,19.019935064342,18.6694651750443,8.92293988882216,30.827726769464,6.95814199166422,9.89914945390541,8.96967760085853,9.10044762917299,10.9138092870864,11.2690730061592,6.60462317580768,9.58337652243951,45.98877170411,11.6036669183388,21.0309883423452,11.4505784521624,13.9787858647127,7.89660327034495,10.9823450274445,12.4475553959606,16.0683449358148,12.2945754650709,6.84569778730567,19.8043114196672,15.4415037322158,18.296320560619,16.042043437296,11.0238779296519,29.1276262306299,9.54275627771164,9.53423842781029,12.8602518772015,14.9917985890985,19.5256958873717,24.0722063960106,40.2377016370134,10.8134210851284,27.8410790707391,9.53549058320298,11.6449185659696,13.2000420649258,23.4866414526027,15.928961377514,22.1555551175744,9.26928758511604,24.1555110772012,11.9459912385817,17.2844298240254,9.14444608306346,31.1298498062467,20.9335927910814,10.7344453724816,17.3367500025792,20.2242082475754,13.2506888912221,9.04980694530854,10.5786081394152,12.1471654897874,14.8011154686501,5.55294545352012,4.87333345808964,9.94173732833269,13.8926486107346,9.88058159489721,7.79472629637734,13.4051664131738,18.4966053145621,12.0331149130896,14.0918965311192,12.1312873362628,9.58029987126429,14.1770908794718,6.83347083450994,11.267183763585,8.60113793535107,9.42896938063245,9.93542447062135,10.3761476202173,6.74894202995376,18.956139692706,6.85116800507922,9.64589860762504,25.2900849135716,15.3616290327475,12.2388938367237,7.71253922495841,12.2057289530575,10.606568295405,11.0689876771133,12.4573571023515,9.84012294106771,14.0644759099812,13.3675992501191,10.2020053492847,8.60202542683993,8.54625913110849,6.83157010255541,7.05000553329454,5.84851772027589,6.26094074174081,6.91185001387205,9.13932509205109,8.54428539729789,9.45613027853309,6.87427565071926,12.5289115167193,8.75810955136955,13.6009439985472,8.58489262956982,11.1127331292753,10.0947918582921,11.7498096548455,9.43543002049673,7.30784017502592,8.16141331844181,13.1967810364585,19.5789363605174,12.3571300346226,8.02883762618528,11.1834865285141,15.3719556972917,10.0315299900876,19.0904957937972,14.0932835223371,19.6895294786783,13.3698380718048,11.1989333282902,7.20983142705737,10.4963223847557,8.99609668407143,15.7252727446278,8.35627889762646,10.77691829129,17.7988782310888,7.14834588950744,14.2938433118477,15.8904466998714,22.0927140302209,14.9671073259806,10.5753134205605,20.4630994085843,14.6641743499487,25.6343485225111,9.71965779908924,29.0242626221383,13.1796450463043,15.4919705323753,19.5525721290635,6.99609571437521,14.0373906102231,40.0285374142735,7.40619481750436,7.65613693383001,11.882406642845,7.08482881627925,10.0569331206005,12.1018654902045,12.6035848110859,11.756732918917,9.68853873791107,7.13847101295772,7.94996519858308,8.72975952773279,8.80457272904059,12.2457206119359,6.10211352747467,17.2589981515025,8.75231377311609,10.3790253121975,7.0596774046232,19.5378502808273,10.4762677792569,15.8858759984794,6.65352387976704,10.4683256158512,10.9350933805939,12.8145813830734,10.6538561125763,13.1273954164373,6.030835435429,14.8863353516788,14.9490557705678,48.0386727924878,9.64263304580916,9.07966049990825,7.28358725083958,11.3831095675649,7.45099909366166,7.02927324090253,5.83059232087223,12.1665822028529,12.628372524067,13.4740978607724,13.1253054232642,10.2825951634173,13.9832875025242,5.88571542958957,10.9579046461139,12.3078726994614,3.8220135030964,9.22047419878867,19.7517014665908,17.7849380813232,13.3870869672986,10.4222477414933,11.189672864804,12.2917303507644,17.9727512071664,14.6277301998894,13.3715160825539,15.2531994518892,10.5846762547732,5.72767171360125,6.82454048461504,4.77769469488717,8.94843454382339,14.526234575056,9.50959814861701,38.1983013940858,19.7112589163994,17.397216470073,14.085618798715,12.8666704904158,16.9108158887163,17.4812533443026,13.2146915985583,13.7425645931786,9.51065914470043,8.33480907565802,8.52382285965433,10.817297816315,10.296229513664,23.331978163061,5.49663707921847,6.53502080719589,13.5249832826688,9.85577265189338,10.902134485663,10.9578409555081,13.2921737380155,11.6060060093677,5.64631794745107,28.6461679080331,15.3370641531769,14.6793370689453,11.8971854015705,12.3061818510684,13.1903490970375,13.9632220908921,6.87734892670021,8.55588541783528,11.5543907157855,13.8440499879613,13.4998074573534,23.7106291161219,9.75578457788065,17.3381010561369,11.7575658316847,9.92464914976325,21.5608483791443,24.703855619146,28.9401260568673,10.7792027129641,11.4810625406704,10.4484651131481,13.5696725934332,11.8197704999891,8.19386228705324,26.0145921187023,11.201899856957,9.29739069207809,15.2401723527873,16.4271984520935,11.0457366943924,8.75010905790652,10.3124710529264,8.9543595472072,9.71218847487211,15.4457825829552,7.72496738116647,14.0784565442073,10.6350056439094,12.2068853494722,11.9836219353392,10.66751106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| ||
|short_description=p1@RNMTL1 | |||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p1@RNMTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNMTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000304478, NM_018146, uc002frw.2_5end |
EntrezGene: | RNMTL1 |
HGNC: | 18485 |
UniProt: | Q9HC36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.24e-17 | 52 |
lymphocyte | 2.80e-16 | 53 |
common lymphoid progenitor | 2.80e-16 | 53 |
T cell | 7.51e-09 | 25 |
pro-T cell | 7.51e-09 | 25 |
mature alpha-beta T cell | 4.04e-08 | 18 |
alpha-beta T cell | 4.04e-08 | 18 |
immature T cell | 4.04e-08 | 18 |
mature T cell | 4.04e-08 | 18 |
immature alpha-beta T cell | 4.04e-08 | 18 |
lymphocyte of B lineage | 5.18e-08 | 24 |
pro-B cell | 5.18e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 7.20e-07 | 47 |