FFCP PHASE1:Hg19::chr11:18610214..18610239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55293 | |EntrezGene=55293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30866 | |HGNC=30866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IX04 | |UniProt=Q8IX04 | ||
|association_with_transcript=0bp_to_ENST00000300038,ENST00000320750,ENST00000396197,ENST00000540666,ENST00000540917_5end | |association_with_transcript=0bp_to_ENST00000300038,ENST00000320750,ENST00000396197,ENST00000540666,ENST00000540917_5end | ||
|cluster_id=chr11:18610214..18610239,- | |||
|description=CAGE_peak_1_at_UEVLD_5end | |description=CAGE_peak_1_at_UEVLD_5end | ||
|id=chr11:18610214..18610239,- | |id=chr11:18610214..18610239,- | ||
|ontology_enrichment_celltype=CL:0000057!3.14e-08!75;CL:0002009!6.76e-07!65 | |ontology_enrichment_celltype=CL:0000057!3.14e-08!75;CL:0002009!6.76e-07!65 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-08,76;CL:0002009,4.05e-07,61;CL:0002194,8.96e-07,59;CL:0000576,8.96e-07,59;CL:0000040,8.96e-07,59;CL:0000559,8.96e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.97e-16!511;UBERON:0000480!1.19e-13!626;UBERON:0000467!1.70e-13!625;UBERON:0000468!2.08e-13!659;UBERON:0000923!2.02e-08!604;UBERON:0005291!2.02e-08!604;UBERON:0006598!2.02e-08!604;UBERON:0002532!2.02e-08!604;UBERON:0002050!2.77e-08!605;UBERON:0005423!2.77e-08!605;UBERON:0000922!2.23e-07!612;UBERON:0003102!5.83e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,3.96e-09,564;UBERON:0005423,1.55e-08,581;UBERON:0000923,2.13e-08,560;UBERON:0010316,2.13e-08,560;UBERON:0005291,2.13e-08,560;UBERON:0006598,2.13e-08,560;UBERON:0010317,2.13e-08,560;UBERON:0002532,2.13e-08,560;UBERON:0003102,8.24e-08,99;UBERON:0000922,5.08e-07,592 | |||
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| ||
|short_description=p1@UEVLD | |short_description=p1@UEVLD | ||
}} | }} |
Latest revision as of 03:10, 17 September 2015
Short description: | p1@UEVLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UEVLD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000300038, ENST00000320750, ENST00000396197, ENST00000540666, ENST00000540917_5end |
EntrezGene: | UEVLD |
HGNC: | 30866 |
UniProt: | Q8IX04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.45e-08 | 76 |
macrophage dendritic cell progenitor | 4.05e-07 | 61 |
monopoietic cell | 8.96e-07 | 59 |
monocyte | 8.96e-07 | 59 |
monoblast | 8.96e-07 | 59 |
promonocyte | 8.96e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 3.96e-09 | 564 |
developing anatomical structure | 1.55e-08 | 581 |
germ layer | 2.13e-08 | 560 |
germ layer / neural crest | 2.13e-08 | 560 |
embryonic tissue | 2.13e-08 | 560 |
presumptive structure | 2.13e-08 | 560 |
germ layer / neural crest derived structure | 2.13e-08 | 560 |
epiblast (generic) | 2.13e-08 | 560 |
surface structure | 8.24e-08 | 99 |
embryo | 5.08e-07 | 592 |