FFCP PHASE1:Hg19::chr7:150147930..150147943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=155038 | |EntrezGene=155038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21792 | |HGNC=21792 | ||
|TSSclassifier=strong | |||
|UniProt=Q8ND71 | |UniProt=Q8ND71 | ||
|association_with_transcript=-18bp_to_NM_175571,uc003whj.2_5end | |association_with_transcript=-18bp_to_NM_175571,uc003whj.2_5end | ||
|cluster_id=chr7:150147930..150147943,+ | |||
|coexpression_cluster_id=C1092 | |coexpression_cluster_id=C1092 | ||
|description=CAGE_peak_4_at_GIMAP8_5end | |description=CAGE_peak_4_at_GIMAP8_5end | ||
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|ontology_enrichment_celltype=CL:0000115!1.58e-24!35;CL:0002139!5.95e-21!24;CL:0000071!3.68e-17!18;CL:0002546!3.68e-17!18;CL:0002078!9.00e-17!44;CL:0000791!6.06e-12!18;CL:0000789!6.06e-12!18;CL:0002420!6.06e-12!18;CL:0002419!6.06e-12!18;CL:0000790!6.06e-12!18;CL:0000213!3.24e-10!57;CL:0000215!3.24e-10!57;CL:0000625!4.28e-10!11;CL:0002087!2.18e-09!119;CL:1000413!3.61e-09!9;CL:0000084!9.98e-08!25;CL:0000827!9.98e-08!25;CL:0002543!1.38e-07!6;CL:0002057!1.42e-07!42;CL:0002194!2.40e-07!63;CL:0000576!2.40e-07!63;CL:0000040!2.40e-07!63;CL:0000559!2.40e-07!63;CL:0002031!2.48e-07!124;CL:0002544!6.82e-07!6;CL:0002009!7.80e-07!65 | |ontology_enrichment_celltype=CL:0000115!1.58e-24!35;CL:0002139!5.95e-21!24;CL:0000071!3.68e-17!18;CL:0002546!3.68e-17!18;CL:0002078!9.00e-17!44;CL:0000791!6.06e-12!18;CL:0000789!6.06e-12!18;CL:0002420!6.06e-12!18;CL:0002419!6.06e-12!18;CL:0000790!6.06e-12!18;CL:0000213!3.24e-10!57;CL:0000215!3.24e-10!57;CL:0000625!4.28e-10!11;CL:0002087!2.18e-09!119;CL:1000413!3.61e-09!9;CL:0000084!9.98e-08!25;CL:0000827!9.98e-08!25;CL:0002543!1.38e-07!6;CL:0002057!1.42e-07!42;CL:0002194!2.40e-07!63;CL:0000576!2.40e-07!63;CL:0000040!2.40e-07!63;CL:0000559!2.40e-07!63;CL:0002031!2.48e-07!124;CL:0002544!6.82e-07!6;CL:0002009!7.80e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.30e-29;36!CL:0002139;3.85e-28;24!CL:0000071;9.53e-23;18!CL:0002078;1.67e-16;45!CL:1000413;7.21e-12;9!CL:0000213;1.33e-10;58!CL:0000215;1.33e-10;58!CL:0002543;9.44e-10;6!CL:0002544;7.57e-09;6!CL:0000625;1.47e-08;11!CL:0000791;4.99e-08;18!CL:0000789;4.99e-08;18!CL:0002419;4.99e-08;18!CL:0002138;5.26e-07;6 | |ontology_enrichment_celltype_v019=CL:0000115;2.30e-29;36!CL:0002139;3.85e-28;24!CL:0000071;9.53e-23;18!CL:0002078;1.67e-16;45!CL:1000413;7.21e-12;9!CL:0000213;1.33e-10;58!CL:0000215;1.33e-10;58!CL:0002543;9.44e-10;6!CL:0002544;7.57e-09;6!CL:0000625;1.47e-08;11!CL:0000791;4.99e-08;18!CL:0000789;4.99e-08;18!CL:0002419;4.99e-08;18!CL:0002138;5.26e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.44e-34,36;CL:0002139,6.20e-28,24;CL:0002078,3.05e-25,45;CL:0000071,9.07e-23,18;CL:0002546,9.07e-23,18;CL:0000213,4.91e-17,58;CL:0000215,4.91e-17,58;CL:1000413,6.70e-12,9;CL:0002543,9.39e-10,6;CL:0002544,8.17e-09,6;CL:0000625,1.36e-08,11;CL:0000791,5.14e-08,18;CL:0000789,5.14e-08,18;CL:0002420,5.14e-08,18;CL:0002419,5.14e-08,18;CL:0000790,5.14e-08,18;CL:0005020,8.46e-07,6;CL:0002138,8.46e-07,6;CL:0005022,8.46e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.53e-23;18!CL:0000790;4.99e-08;18!CL:0005022;5.26e-07;6 | |ontology_enrichment_development_v019=CL:0002546;9.53e-23;18!CL:0000790;4.99e-08;18!CL:0005022;5.26e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.79e-45!115;UBERON:0001986!3.68e-17!18;UBERON:0004638!3.68e-17!18;UBERON:0004852!3.68e-17!18;UBERON:0002193!6.54e-14!112;UBERON:0003081!7.78e-13!216;UBERON:0000487!1.09e-12!22;UBERON:0002390!7.83e-11!102;UBERON:0003061!7.83e-11!102;UBERON:0001009!2.33e-10!113;UBERON:0006914!2.51e-10!25;UBERON:0003915!3.61e-09!9;UBERON:0004700!3.61e-09!9;UBERON:0001917!3.61e-09!9;UBERON:0004535!4.07e-09!110;UBERON:0002405!1.18e-08!115;UBERON:0004111!2.82e-08!241;UBERON:0000178!3.81e-08!15;UBERON:0000179!3.81e-08!15;UBERON:0000463!3.81e-08!15;UBERON:0000025!4.37e-08!194;UBERON:0001049!7.42e-08!57;UBERON:0005068!7.42e-08!57;UBERON:0006241!7.42e-08!57;UBERON:0007135!7.42e-08!57;UBERON:0000055!3.76e-07!69;UBERON:0000477!9.80e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!3.79e-45!115;UBERON:0001986!3.68e-17!18;UBERON:0004638!3.68e-17!18;UBERON:0004852!3.68e-17!18;UBERON:0002193!6.54e-14!112;UBERON:0003081!7.78e-13!216;UBERON:0000487!1.09e-12!22;UBERON:0002390!7.83e-11!102;UBERON:0003061!7.83e-11!102;UBERON:0001009!2.33e-10!113;UBERON:0006914!2.51e-10!25;UBERON:0003915!3.61e-09!9;UBERON:0004700!3.61e-09!9;UBERON:0001917!3.61e-09!9;UBERON:0004535!4.07e-09!110;UBERON:0002405!1.18e-08!115;UBERON:0004111!2.82e-08!241;UBERON:0000178!3.81e-08!15;UBERON:0000179!3.81e-08!15;UBERON:0000463!3.81e-08!15;UBERON:0000025!4.37e-08!194;UBERON:0001049!7.42e-08!57;UBERON:0005068!7.42e-08!57;UBERON:0006241!7.42e-08!57;UBERON:0007135!7.42e-08!57;UBERON:0000055!3.76e-07!69;UBERON:0000477!9.80e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.53e-23;18!UBERON:0001986;9.53e-23;18!UBERON:0004852;9.53e-23;18!UBERON:0000487;1.86e-17;22!UBERON:0006914;1.26e-14;25!UBERON:0003915;7.21e-12;9!UBERON:0004700;7.21e-12;9!UBERON:0001917;7.21e-12;9!UBERON:0000178;4.00e-11;15!UBERON:0000179;4.00e-11;15!UBERON:0000463;4.00e-11;15!UBERON:0000490;5.43e-09;33!UBERON:0001638;3.98e-08;9!UBERON:0003920;3.98e-08;9!UBERON:0004582;3.98e-08;9!UBERON:0002193;4.92e-08;42!UBERON:0002465;5.31e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004638;9.53e-23;18!UBERON:0001986;9.53e-23;18!UBERON:0004852;9.53e-23;18!UBERON:0000487;1.86e-17;22!UBERON:0006914;1.26e-14;25!UBERON:0003915;7.21e-12;9!UBERON:0004700;7.21e-12;9!UBERON:0001917;7.21e-12;9!UBERON:0000178;4.00e-11;15!UBERON:0000179;4.00e-11;15!UBERON:0000463;4.00e-11;15!UBERON:0000490;5.43e-09;33!UBERON:0001638;3.98e-08;9!UBERON:0003920;3.98e-08;9!UBERON:0004582;3.98e-08;9!UBERON:0002193;4.92e-08;42!UBERON:0002465;5.31e-07;10 | ||
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| ||
|short_description=p4@GIMAP8 | |short_description=p4@GIMAP8 | ||
}} | }} |
Latest revision as of 03:18, 17 September 2015
Short description: | p4@GIMAP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GIMAP8_5end |
Coexpression cluster: | C1092_Hepatic_CD8_CD4_Endothelial_Renal_lymph_spleen |
Association with transcript: | -18bp_to_NM_175571, uc003whj.2_5end |
EntrezGene: | GIMAP8 |
HGNC: | 21792 |
UniProt: | Q8ND71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.44e-34 | 36 |
endothelial cell of vascular tree | 6.20e-28 | 24 |
meso-epithelial cell | 3.05e-25 | 45 |
blood vessel endothelial cell | 9.07e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.07e-23 | 18 |
lining cell | 4.91e-17 | 58 |
barrier cell | 4.91e-17 | 58 |
endothelial cell of artery | 6.70e-12 | 9 |
vein endothelial cell | 9.39e-10 | 6 |
aortic endothelial cell | 8.17e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.36e-08 | 11 |
mature alpha-beta T cell | 5.14e-08 | 18 |
alpha-beta T cell | 5.14e-08 | 18 |
immature T cell | 5.14e-08 | 18 |
mature T cell | 5.14e-08 | 18 |
immature alpha-beta T cell | 5.14e-08 | 18 |
lymphangioblast | 8.46e-07 | 6 |
endothelial cell of lymphatic vessel | 8.46e-07 | 6 |
vascular lymphangioblast | 8.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 9.07e-23 | 18 |
endothelium | 9.07e-23 | 18 |
cardiovascular system endothelium | 9.07e-23 | 18 |
adult organism | 4.52e-21 | 114 |
simple squamous epithelium | 1.79e-17 | 22 |
lateral plate mesoderm | 1.72e-16 | 203 |
circulatory system | 3.93e-15 | 112 |
squamous epithelium | 1.22e-14 | 25 |
hemolymphoid system | 4.11e-14 | 108 |
cardiovascular system | 2.40e-13 | 109 |
endothelial tube | 6.70e-12 | 9 |
arterial system endothelium | 6.70e-12 | 9 |
endothelium of artery | 6.70e-12 | 9 |
blood | 4.58e-11 | 15 |
haemolymphatic fluid | 4.58e-11 | 15 |
organism substance | 4.58e-11 | 15 |
vessel | 9.61e-11 | 68 |
hematopoietic system | 3.30e-10 | 98 |
blood island | 3.30e-10 | 98 |
epithelial tube open at both ends | 3.01e-08 | 59 |
blood vessel | 3.01e-08 | 59 |
blood vasculature | 3.01e-08 | 59 |
vascular cord | 3.01e-08 | 59 |
vasculature | 3.12e-08 | 78 |
vascular system | 3.12e-08 | 78 |
vein | 4.12e-08 | 9 |
venous blood vessel | 4.12e-08 | 9 |
venous system | 4.12e-08 | 9 |
immune system | 7.62e-08 | 93 |
mesoderm | 9.78e-08 | 315 |
mesoderm-derived structure | 9.78e-08 | 315 |
presumptive mesoderm | 9.78e-08 | 315 |
splanchnic layer of lateral plate mesoderm | 6.16e-07 | 83 |
lymphoid system | 7.93e-07 | 10 |