FFCP PHASE1:Hg19::chr7:150329732..150329739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=474344 | |EntrezGene=474344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21918 | |HGNC=21918 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7B6,B4DH95,Q6P9H5 | |UniProt=C9J7B6,B4DH95,Q6P9H5 | ||
|association_with_transcript=0bp_to_NM_001244071,NM_001244072,NM_024711_5end | |association_with_transcript=0bp_to_NM_001244071,NM_001244072,NM_024711_5end | ||
|cluster_id=chr7:150329732..150329739,- | |||
|coexpression_cluster_id=C1203 | |||
|description=CAGE_peak_8_at_GIMAP6_5end | |description=CAGE_peak_8_at_GIMAP6_5end | ||
|id=chr7:150329732..150329739,- | |id=chr7:150329732..150329739,- | ||
|ontology_enrichment_celltype=CL:0002139!9.73e-50!24;CL:0000115!9.43e-41!35;CL:0000071!5.64e-38!18;CL:0002546!5.64e-38!18;CL:0002078!1.46e-30!44;CL:0000213!1.37e-21!57;CL:0000215!1.37e-21!57;CL:1000413!2.78e-20!9;CL:0002544!3.75e-14!6;CL:0002543!9.65e-14!6;CL:0005020!3.28e-13!6;CL:0002138!3.28e-13!6;CL:0005022!3.28e-13!6;CL:0002618!1.87e-07!3;CL:0000076!3.17e-07!62;CL:0002144!3.30e-07!3 | |ontology_enrichment_celltype=CL:0002139!9.73e-50!24;CL:0000115!9.43e-41!35;CL:0000071!5.64e-38!18;CL:0002546!5.64e-38!18;CL:0002078!1.46e-30!44;CL:0000213!1.37e-21!57;CL:0000215!1.37e-21!57;CL:1000413!2.78e-20!9;CL:0002544!3.75e-14!6;CL:0002543!9.65e-14!6;CL:0005020!3.28e-13!6;CL:0002138!3.28e-13!6;CL:0005022!3.28e-13!6;CL:0002618!1.87e-07!3;CL:0000076!3.17e-07!62;CL:0002144!3.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.93e-122;24!CL:0000071;2.03e-102;18!CL:0000115;3.23e-82;36!CL:1000413;8.31e-75;9!CL:0002078;1.51e-52;45!CL:0002544;1.15e-50;6!CL:0000213;7.28e-40;58!CL:0000215;7.28e-40;58!CL:0002543;4.58e-35;6!CL:0002138;6.38e-22;6!CL:0000076;3.23e-18;63!CL:0002545;5.28e-18;2!CL:0002618;6.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.33e-122,24;CL:0000071,1.53e-102,18;CL:0002546,1.53e-102,18;CL:0000115,2.11e-98,36;CL:0002078,4.15e-78,45;CL:1000413,7.03e-75,9;CL:0000213,6.68e-60,58;CL:0000215,6.68e-60,58;CL:0002544,1.05e-50,6;CL:0002543,4.27e-35,6;CL:0000076,1.63e-27,63;CL:0000222,5.09e-27,121;CL:0005020,6.93e-22,6;CL:0002138,6.93e-22,6;CL:0005022,6.93e-22,6;CL:0002545,4.85e-18,2;CL:0002618,5.58e-12,3;CL:0002321,3.55e-11,250;CL:0000066,4.06e-11,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.03e-102;18!CL:0005022;6.38e-22;6!CL:0000222;5.76e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.64e-38!18;UBERON:0004638!5.64e-38!18;UBERON:0004852!5.64e-38!18;UBERON:0000487!2.92e-33!22;UBERON:0006914!1.60e-28!25;UBERON:0003915!2.78e-20!9;UBERON:0004700!2.78e-20!9;UBERON:0001917!2.78e-20!9;UBERON:0000055!2.04e-16!69;UBERON:0002049!2.59e-13!79;UBERON:0007798!2.59e-13!79;UBERON:0001009!5.43e-12!113;UBERON:0001981!4.66e-11!60;UBERON:0007500!4.66e-11!60;UBERON:0004537!4.66e-11!60;UBERON:0006965!4.66e-11!60;UBERON:0004535!1.23e-10!110;UBERON:0002465!3.62e-10!10;UBERON:0001473!1.16e-09!8;UBERON:0004536!1.16e-09!8;UBERON:0006558!1.16e-09!8;UBERON:0007023!1.39e-09!115;UBERON:0004872!2.41e-09!84;UBERON:0001638!8.13e-09!9;UBERON:0003920!8.13e-09!9;UBERON:0004582!8.13e-09!9;UBERON:0001915!3.30e-07!3;UBERON:0001982!3.30e-07!3;UBERON:0003081!8.54e-07!216 | |ontology_enrichment_uberon=UBERON:0001986!5.64e-38!18;UBERON:0004638!5.64e-38!18;UBERON:0004852!5.64e-38!18;UBERON:0000487!2.92e-33!22;UBERON:0006914!1.60e-28!25;UBERON:0003915!2.78e-20!9;UBERON:0004700!2.78e-20!9;UBERON:0001917!2.78e-20!9;UBERON:0000055!2.04e-16!69;UBERON:0002049!2.59e-13!79;UBERON:0007798!2.59e-13!79;UBERON:0001009!5.43e-12!113;UBERON:0001981!4.66e-11!60;UBERON:0007500!4.66e-11!60;UBERON:0004537!4.66e-11!60;UBERON:0006965!4.66e-11!60;UBERON:0004535!1.23e-10!110;UBERON:0002465!3.62e-10!10;UBERON:0001473!1.16e-09!8;UBERON:0004536!1.16e-09!8;UBERON:0006558!1.16e-09!8;UBERON:0007023!1.39e-09!115;UBERON:0004872!2.41e-09!84;UBERON:0001638!8.13e-09!9;UBERON:0003920!8.13e-09!9;UBERON:0004582!8.13e-09!9;UBERON:0001915!3.30e-07!3;UBERON:0001982!3.30e-07!3;UBERON:0003081!8.54e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.03e-102;18!UBERON:0001986;2.03e-102;18!UBERON:0004852;2.03e-102;18!UBERON:0000487;2.29e-83;22!UBERON:0003915;8.31e-75;9!UBERON:0004700;8.31e-75;9!UBERON:0001917;8.31e-75;9!UBERON:0006914;4.49e-73;25!UBERON:0000490;1.60e-50;33!UBERON:0000055;4.25e-28;65!UBERON:0001638;2.26e-23;9!UBERON:0003920;2.26e-23;9!UBERON:0004582;2.26e-23;9!UBERON:0007500;6.80e-21;56!UBERON:0001981;6.80e-21;56!UBERON:0004537;6.80e-21;56!UBERON:0005800;5.28e-18;2!UBERON:0001515;5.28e-18;2!UBERON:0002049;4.78e-17;75!UBERON:0007798;4.78e-17;75!UBERON:0001473;1.63e-16;8!UBERON:0004536;1.63e-16;8!UBERON:0006558;1.63e-16;8!UBERON:0001637;1.50e-14;42!UBERON:0003509;1.50e-14;42!UBERON:0004572;1.50e-14;42!UBERON:0000947;3.33e-14;21!UBERON:0010191;3.33e-14;21!UBERON:0003914;4.99e-14;74!UBERON:0001009;2.20e-13;112!UBERON:0002465;2.93e-13;10!UBERON:0004535;1.81e-11;109!UBERON:0000025;4.00e-11;93!UBERON:0002134;4.27e-10;1!UBERON:0005208;4.27e-10;1!UBERON:0004145;4.27e-10;1!UBERON:0005946;4.27e-10;1!UBERON:0005965;4.27e-10;1!UBERON:0002078;4.27e-10;1!UBERON:0004111;1.72e-09;130!UBERON:0000996;1.91e-09;1!UBERON:0004573;3.12e-09;33!UBERON:0004571;3.12e-09;33!UBERON:0002066;1.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.53e-102,18;UBERON:0001986,1.53e-102,18;UBERON:0004852,1.53e-102,18;UBERON:0000487,1.82e-83,22;UBERON:0003915,7.03e-75,9;UBERON:0004700,7.03e-75,9;UBERON:0001917,7.03e-75,9;UBERON:0006914,3.67e-73,25;UBERON:0000055,7.65e-51,68;UBERON:0002049,6.50e-44,78;UBERON:0007798,6.50e-44,78;UBERON:0007500,2.52e-38,59;UBERON:0001981,2.52e-38,59;UBERON:0004537,2.52e-38,59;UBERON:0006965,2.52e-38,59;UBERON:0004535,1.71e-30,109;UBERON:0001009,1.37e-29,112;UBERON:0004872,2.08e-26,83;UBERON:0001638,2.15e-23,9;UBERON:0003920,2.15e-23,9;UBERON:0004582,2.15e-23,9;UBERON:0003914,3.38e-20,117;UBERON:0005800,4.85e-18,2;UBERON:0001515,4.85e-18,2;UBERON:0001473,1.73e-16,8;UBERON:0004536,1.73e-16,8;UBERON:0006558,1.73e-16,8;UBERON:0001637,4.50e-15,42;UBERON:0003509,4.50e-15,42;UBERON:0004572,4.50e-15,42;UBERON:0004111,7.81e-15,240;UBERON:0000947,3.25e-14,21;UBERON:0010191,3.25e-14,21;UBERON:0000490,1.96e-13,148;UBERON:0002465,3.07e-13,10;UBERON:0000025,5.28e-11,192;UBERON:0003081,3.08e-10,203;UBERON:0002134,4.87e-10,1;UBERON:0005208,4.87e-10,1;UBERON:0005946,4.87e-10,1;UBERON:0005965,4.87e-10,1;UBERON:0002078,4.87e-10,1;UBERON:0000996,1.36e-09,1;UBERON:0004573,7.21e-09,33;UBERON:0004571,7.21e-09,33;UBERON:0002066,1.55e-07,5;UBERON:0000926,3.18e-07,315;UBERON:0004120,3.18e-07,315;UBERON:0006603,3.18e-07,315 | |||
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|short_description=p8@GIMAP6 | |short_description=p8@GIMAP6 | ||
}} | }} |
Latest revision as of 03:40, 17 September 2015
Short description: | p8@GIMAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GIMAP6_5end |
Coexpression cluster: | C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast |
Association with transcript: | 0bp_to_NM_001244071, NM_001244072, NM_024711_5end |
EntrezGene: | GIMAP6 |
HGNC: | 21918 |
UniProt: | C9J7B6B4DH95Q6P9H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.33e-122 | 24 |
blood vessel endothelial cell | 1.53e-102 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.53e-102 | 18 |
endothelial cell | 2.11e-98 | 36 |
meso-epithelial cell | 4.15e-78 | 45 |
endothelial cell of artery | 7.03e-75 | 9 |
lining cell | 6.68e-60 | 58 |
barrier cell | 6.68e-60 | 58 |
aortic endothelial cell | 1.05e-50 | 6 |
vein endothelial cell | 4.27e-35 | 6 |
squamous epithelial cell | 1.63e-27 | 63 |
mesodermal cell | 5.09e-27 | 121 |
lymphangioblast | 6.93e-22 | 6 |
endothelial cell of lymphatic vessel | 6.93e-22 | 6 |
vascular lymphangioblast | 6.93e-22 | 6 |
thoracic aorta endothelial cell | 4.85e-18 | 2 |
endothelial cell of umbilical vein | 5.58e-12 | 3 |
embryonic cell | 3.55e-11 | 250 |
epithelial cell | 4.06e-11 | 253 |