FFCP PHASE1:Hg19::chr15:31619200..31619211,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:31619200..31619211,+ to FFCP PHASE1:Hg19::chr15:31619200..31619211,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51621 | |EntrezGene=51621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |HGNC=13672 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Y9 | |UniProt=Q9Y2Y9 | ||
|association_with_transcript=117bp_to_NM_015995,uc001zfo.2_5end | |||
|cluster_id=chr15:31619200..31619211,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_12_at_KLF13_5end | |||
|id=chr15:31619200..31619211,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.14e-14!140;CL:0000037!2.56e-12!172;CL:0000566!2.56e-12!172;CL:0000988!1.80e-11!182;CL:0002031!1.39e-10!124;CL:0002032!2.35e-10!165;CL:0000837!2.35e-10!165;CL:0002087!7.85e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.36e-10;3!CL:0000623;1.20e-09;3!CL:0000226;3.16e-09;3!CL:0000842;3.16e-09;3!CL:0000767;7.30e-09;3!CL:0000624;1.41e-07;6!CL:0000084;1.72e-07;25!CL:0000542;3.48e-07;53!CL:0000791;6.52e-07;18!CL:0000789;6.52e-07;18!CL:0002419;6.52e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.81e-17,136;CL:0000037,7.13e-14,168;CL:0000988,1.11e-12,177;CL:0002087,2.03e-12,115;CL:0000784,3.41e-10,3;CL:0000838,4.88e-10,52;CL:0002032,6.72e-10,161;CL:0000837,6.72e-10,161;CL:0000542,8.95e-10,53;CL:0000051,8.95e-10,53;CL:0000623,1.12e-09,3;CL:0000825,1.12e-09,3;CL:0002031,1.59e-09,120;CL:0000226,1.66e-09,3;CL:0000842,1.66e-09,3;CL:0000767,3.16e-09,3;CL:0000624,1.19e-07,6;CL:0000084,1.88e-07,25;CL:0000827,1.88e-07,25;CL:0000791,6.04e-07,18;CL:0000789,6.04e-07,18;CL:0002420,6.04e-07,18;CL:0002419,6.04e-07,18;CL:0000790,6.04e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.48e-07;53!CL:0000790;6.52e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.44e-09!115;UBERON:0001049!3.13e-08!57;UBERON:0005068!3.13e-08!57;UBERON:0006241!3.13e-08!57;UBERON:0007135!3.13e-08!57;UBERON:0001017!1.70e-07!82;UBERON:0002616!2.14e-07!59;UBERON:0001893!8.54e-07!34;UBERON:0005743!8.76e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.50e-07,20 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,1.74467704820074,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0.305653622991805,0.410502947249729,0.0787107813136792,1.96682138424452,1.53531759238885,3.09632246632152,0,0,0.739508020333575,0.0774672005803016,0.710846162437108,0,1.10799081706375,4.01088894940283,2.38711957787437,0.223915474239924,0,0,1.01778767145695,0.755751887377619,0.970336244751265,1.16214518452842,0.411167888021826,0.619412741790207,0,0,0,0.689491361473237,0,0,0.941211697713023,1.09162460023138,0,0.612167784741805,0,1.91801137739712,0.659702600373432,1.59570926097305,0.852449501065388,0,0,0,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0.316462387440884,0.633765858935825,0.425208599930087,0.419317291016752,0.44931452458598,0.600707571366025,0.16072558669708,0.570025487482497,0.39783335439818,0.547992461293902,0,0,0,1.28019066769952,0.400395987036012,0,0,0,2.27685187643779,3.52342313622563,3.82273228125229,6.60856642895129,5.60508562981536,0,1.96709770113833,2.35806457649499,2.67281948699362,0.334372990781356,0.651844533267181,0,0,0.222820913770347,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0.579606171470105,0.444859689486181,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,0,0,0.637130828648193,0,0,0.301150238155546,0,0,0,0,5.24177532384304,6.41856469880418,3.47578569318718,4.87613732627923,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.589405839739707,0,0.370784442784429,0,0,0,17.1713249499846,14.2998727695032,15.9726725571713,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,2.63560834872127,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,0.464775771478074,0.310983165046111,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,0,0,0.674338760312407,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,0,0.878002283269004,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.447792613514241,0,0,0,0.176096868026452,0.829312462163088,0.720599767084807,0.6312121671319,0.380987365753014,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0.179060963239896,0.896681151948218,2.56139988262505,4.09692392233083,2.95188983443421,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0.368738337083406,0,0.195801157462741,0.686286847621712,1.86091223510599,3.45142721309787,2.98837161849644,0.606255142892519,0,0.604780586659361,0.496215615637554,0,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0.120859449591622,0.802025881213139,0.736647911487171,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.206082023295445,0.27470839445503,0.165018999841176,1.14853107599234,0,0,0.193341436584244,0,0.460511024178389,0.413509717453592,0.214840489736547,0.435050081742686,0.340906509664404,0.178064071293475,0.661139661443912,0.384380134730212,0,0.4046311234222,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.432807638929335,0.355709216742071,0,0.199579371432817,0.191505370132367,1.69338866179106,0,0.561594356226918,0,0.313359791546046,0,0,0.642352300414798,0.201799707191048,0.851692475380653,0.343505344755765,0.614481528616916,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0.36408156524854,0.111443384277478,0,0.23874448473769,0,0,1.9882952955326,0.984685914873589,0.111308705022906,0.494411622680279,0.211125408127993,0.398495976502139,0.276283915531148,0,0.1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| 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| ||
|short_description=p12@KLF13 | |||
}} | }} |
Latest revision as of 03:42, 17 September 2015
Short description: | p12@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KLF13_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 117bp_to_NM_015995, uc001zfo.2_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | Q9Y2Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.81e-17 | 136 |
hematopoietic stem cell | 7.13e-14 | 168 |
hematopoietic cell | 1.11e-12 | 177 |
nongranular leukocyte | 2.03e-12 | 115 |
plasmacytoid dendritic cell | 3.41e-10 | 3 |
lymphoid lineage restricted progenitor cell | 4.88e-10 | 52 |
hematopoietic oligopotent progenitor cell | 6.72e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.72e-10 | 161 |
lymphocyte | 8.95e-10 | 53 |
common lymphoid progenitor | 8.95e-10 | 53 |
natural killer cell | 1.12e-09 | 3 |
pro-NK cell | 1.12e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.59e-09 | 120 |
single nucleate cell | 1.66e-09 | 3 |
mononuclear cell | 1.66e-09 | 3 |
basophil | 3.16e-09 | 3 |
CD4-positive, alpha-beta T cell | 1.19e-07 | 6 |
T cell | 1.88e-07 | 25 |
pro-T cell | 1.88e-07 | 25 |
mature alpha-beta T cell | 6.04e-07 | 18 |
alpha-beta T cell | 6.04e-07 | 18 |
immature T cell | 6.04e-07 | 18 |
mature T cell | 6.04e-07 | 18 |
immature alpha-beta T cell | 6.04e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.50e-07 | 20 |