FFCP PHASE1:Hg19::chr12:12491541..12491552,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12491541..12491552,- to FFCP PHASE1:Hg19::chr12:12491541..12491552,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54682 | |EntrezGene=54682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25505 | |HGNC=25505 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3M3 | |UniProt=F5H3M3 | ||
|association_with_transcript=55bp_to_ENST00000545735,uc010shm.1_5end | |||
|cluster_id=chr12:12491541..12491552,- | |||
|description=CAGE_peak_11_at_MANSC1_5end | |||
|id=chr12:12491541..12491552,- | |||
|ontology_enrichment_celltype=CL:0002139!2.38e-28!24;CL:0000071!6.02e-25!18;CL:0002546!6.02e-25!18;CL:0000115!3.87e-19!35;CL:0002078!7.80e-14!44;CL:1000413!1.52e-13!9;CL:0002543!3.99e-12!6;CL:0000213!2.86e-10!57;CL:0000215!2.86e-10!57;CL:0000076!9.60e-10!62;CL:0002544!2.17e-08!6;CL:0002618!6.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.14e-98;24!CL:0000071;5.12e-87;18!CL:0000115;1.93e-57;36!CL:0002543;2.50e-56;6!CL:1000413;2.48e-51;9!CL:0002078;2.26e-31;45!CL:0002618;3.70e-29;3!CL:0000213;4.57e-26;58!CL:0000215;4.57e-26;58!CL:0002544;1.16e-25;6!CL:0000076;9.91e-17;63!CL:0002138;9.81e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.02e-98,24;CL:0000071,3.38e-87,18;CL:0002546,3.38e-87,18;CL:0000115,7.07e-65,36;CL:0002543,1.16e-56,6;CL:0002078,1.91e-51,45;CL:1000413,2.89e-51,9;CL:0000213,2.16e-39,58;CL:0000215,2.16e-39,58;CL:0002618,2.64e-29,3;CL:0000076,1.74e-27,63;CL:0002544,1.20e-25,6;CL:0000222,1.32e-17,121;CL:0005020,1.24e-14,6;CL:0002138,1.24e-14,6;CL:0005022,1.24e-14,6;CL:0000066,1.95e-09,253;CL:0002321,3.26e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.12e-87;18!CL:0005022;9.81e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.02e-25!18;UBERON:0004638!6.02e-25!18;UBERON:0004852!6.02e-25!18;UBERON:0000487!1.94e-19!22;UBERON:0006914!1.76e-16!25;UBERON:0004111!1.19e-15!241;UBERON:0000055!1.95e-15!69;UBERON:0000477!1.13e-13!286;UBERON:0003915!1.52e-13!9;UBERON:0004700!1.52e-13!9;UBERON:0001917!1.52e-13!9;UBERON:0001981!2.92e-13!60;UBERON:0007500!2.92e-13!60;UBERON:0004537!2.92e-13!60;UBERON:0006965!2.92e-13!60;UBERON:0001009!5.74e-13!113;UBERON:0004535!9.83e-13!110;UBERON:0002049!2.42e-12!79;UBERON:0007798!2.42e-12!79;UBERON:0000483!2.91e-12!309;UBERON:0000119!5.89e-12!312;UBERON:0007023!6.14e-12!115;UBERON:0004872!1.88e-11!84;UBERON:0000025!1.12e-10!194;UBERON:0001637!6.56e-08!42;UBERON:0003509!6.56e-08!42;UBERON:0004572!6.56e-08!42;UBERON:0000467!1.08e-07!625;UBERON:0001638!1.08e-07!9;UBERON:0003920!1.08e-07!9;UBERON:0004582!1.08e-07!9;UBERON:0000480!1.23e-07!626;UBERON:0003914!1.46e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.12e-87;18!UBERON:0001986;5.12e-87;18!UBERON:0004852;5.12e-87;18!UBERON:0000487;7.17e-71;22!UBERON:0006914;3.79e-62;25!UBERON:0003915;2.48e-51;9!UBERON:0004700;2.48e-51;9!UBERON:0001917;2.48e-51;9!UBERON:0000490;3.46e-43;33!UBERON:0001638;1.73e-37;9!UBERON:0003920;1.73e-37;9!UBERON:0004582;1.73e-37;9!UBERON:0000055;9.75e-19;65!UBERON:0002066;9.09e-18;5!UBERON:0007500;1.33e-15;56!UBERON:0001981;1.33e-15;56!UBERON:0004537;1.33e-15;56!UBERON:0002049;3.42e-14;75!UBERON:0007798;3.42e-14;75!UBERON:0003914;3.12e-12;74!UBERON:0001473;3.40e-11;8!UBERON:0004536;3.40e-11;8!UBERON:0006558;3.40e-11;8!UBERON:0001637;1.41e-10;42!UBERON:0003509;1.41e-10;42!UBERON:0004572;1.41e-10;42!UBERON:0010260;3.99e-10;9!UBERON:0001009;1.62e-09;112!UBERON:0000025;1.91e-09;93!UBERON:0004535;4.58e-09;109!UBERON:0002465;4.63e-09;10!UBERON:0004111;3.80e-08;130!UBERON:0000947;1.74e-07;21!UBERON:0010191;1.74e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.38e-87,18;UBERON:0001986,3.38e-87,18;UBERON:0004852,3.38e-87,18;UBERON:0000487,5.12e-71,22;UBERON:0006914,2.82e-62,25;UBERON:0003915,2.89e-51,9;UBERON:0004700,2.89e-51,9;UBERON:0001917,2.89e-51,9;UBERON:0001638,1.04e-37,9;UBERON:0003920,1.04e-37,9;UBERON:0004582,1.04e-37,9;UBERON:0000055,2.99e-33,68;UBERON:0002049,1.12e-28,78;UBERON:0007798,1.12e-28,78;UBERON:0007500,2.83e-25,59;UBERON:0001981,2.83e-25,59;UBERON:0004537,2.83e-25,59;UBERON:0006965,2.83e-25,59;UBERON:0004535,1.41e-22,109;UBERON:0001009,6.64e-22,112;UBERON:0002066,7.44e-18,5;UBERON:0004872,2.22e-17,83;UBERON:0003914,1.01e-11,117;UBERON:0001473,4.06e-11,8;UBERON:0004536,4.06e-11,8;UBERON:0006558,4.06e-11,8;UBERON:0001637,1.76e-10,42;UBERON:0003509,1.76e-10,42;UBERON:0004572,1.76e-10,42;UBERON:0010260,3.58e-10,9;UBERON:0002465,5.32e-09,10;UBERON:0000490,7.96e-09,148;UBERON:0004111,9.74e-09,240;UBERON:0000947,1.76e-07,21;UBERON:0010191,1.76e-07,21;UBERON:0000025,1.96e-07,192;UBERON:0003081,6.67e-07,203 | |||
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| ||
|short_description=p11@MANSC1 | |||
}} | }} |
Latest revision as of 03:46, 17 September 2015
Short description: | p11@MANSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MANSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000545735, uc010shm.1_5end |
EntrezGene: | MANSC1 |
HGNC: | 25505 |
UniProt: | F5H3M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.02e-98 | 24 |
blood vessel endothelial cell | 3.38e-87 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.38e-87 | 18 |
endothelial cell | 7.07e-65 | 36 |
vein endothelial cell | 1.16e-56 | 6 |
meso-epithelial cell | 1.91e-51 | 45 |
endothelial cell of artery | 2.89e-51 | 9 |
lining cell | 2.16e-39 | 58 |
barrier cell | 2.16e-39 | 58 |
endothelial cell of umbilical vein | 2.64e-29 | 3 |
squamous epithelial cell | 1.74e-27 | 63 |
aortic endothelial cell | 1.20e-25 | 6 |
mesodermal cell | 1.32e-17 | 121 |
lymphangioblast | 1.24e-14 | 6 |
endothelial cell of lymphatic vessel | 1.24e-14 | 6 |
vascular lymphangioblast | 1.24e-14 | 6 |
epithelial cell | 1.95e-09 | 253 |
embryonic cell | 3.26e-08 | 250 |