FFCP PHASE1:Hg19::chr15:31619535..31619569,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:31619535..31619569,+
|short_description=p5@KLF13
|description=CAGE_peak_5_at_KLF13_5end
|association_with_transcript=-200bp_to_ENST00000558921_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51621 | |EntrezGene=51621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |HGNC=13672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-200bp_to_ENST00000558921_5end | |||
|cluster_id=chr15:31619535..31619569,+ | |||
|description=CAGE_peak_5_at_KLF13_5end | |||
|id=chr15:31619535..31619569,+ | |||
|ontology_enrichment_celltype=CL:0000839!6.70e-16!70;CL:0000557!8.42e-16!71;CL:0000766!4.88e-15!76;CL:0002009!1.68e-13!65;CL:0002194!1.32e-12!63;CL:0000576!1.32e-12!63;CL:0000040!1.32e-12!63;CL:0000559!1.32e-12!63;CL:0002057!2.49e-11!42;CL:0000860!5.31e-11!45;CL:0000763!4.31e-09!112;CL:0000049!4.31e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-08;39!CL:0000234;1.16e-08;39!CL:0000766;2.12e-08;69!CL:0000576;8.04e-08;48!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.71e-18,66;CL:0000557,2.29e-18,67;CL:0000766,9.57e-18,72;CL:0002009,1.57e-15,61;CL:0002194,1.99e-14,59;CL:0000576,1.99e-14,59;CL:0000040,1.99e-14,59;CL:0000559,1.99e-14,59;CL:0000473,8.20e-14,48;CL:0000234,8.20e-14,48;CL:0000860,7.13e-12,42;CL:0002057,7.13e-12,42;CL:0000763,4.65e-11,108;CL:0000049,4.65e-11,108;CL:0000738,7.51e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.92e-17!102;UBERON:0003061!4.92e-17!102;UBERON:0002193!2.30e-16!112;UBERON:0002371!1.08e-14!80;UBERON:0007023!5.38e-13!115;UBERON:0001474!3.85e-12!86;UBERON:0004765!1.41e-11!101;UBERON:0001434!1.41e-11!101;UBERON:0002405!1.19e-09!115;UBERON:0000467!6.34e-09!625;UBERON:0000480!7.01e-09!626;UBERON:0000062!1.32e-07!511;UBERON:0000468!1.50e-07!659;UBERON:0003081!2.61e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.96e-19,98;UBERON:0003061,8.96e-19,98;UBERON:0002193,1.07e-17,108;UBERON:0002371,4.30e-17,76;UBERON:0002405,2.32e-14,93;UBERON:0001474,3.46e-14,82;UBERON:0004765,1.16e-12,90;UBERON:0007023,1.24e-12,114;UBERON:0001434,6.27e-12,100;UBERON:0003081,6.38e-07,203 | |||
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| ||
|short_description=p5@KLF13 | |||
}} | }} |
Latest revision as of 03:46, 17 September 2015
Short description: | p5@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -200bp_to_ENST00000558921_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.71e-18 | 66 |
granulocyte monocyte progenitor cell | 2.29e-18 | 67 |
myeloid leukocyte | 9.57e-18 | 72 |
macrophage dendritic cell progenitor | 1.57e-15 | 61 |
monopoietic cell | 1.99e-14 | 59 |
monocyte | 1.99e-14 | 59 |
monoblast | 1.99e-14 | 59 |
promonocyte | 1.99e-14 | 59 |
defensive cell | 8.20e-14 | 48 |
phagocyte | 8.20e-14 | 48 |
classical monocyte | 7.13e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.13e-12 | 42 |
myeloid cell | 4.65e-11 | 108 |
common myeloid progenitor | 4.65e-11 | 108 |
leukocyte | 7.51e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.96e-19 | 98 |
blood island | 8.96e-19 | 98 |
hemolymphoid system | 1.07e-17 | 108 |
bone marrow | 4.30e-17 | 76 |
immune system | 2.32e-14 | 93 |
bone element | 3.46e-14 | 82 |
skeletal element | 1.16e-12 | 90 |
adult organism | 1.24e-12 | 114 |
skeletal system | 6.27e-12 | 100 |
lateral plate mesoderm | 6.38e-07 | 203 |