FFCP PHASE1:Hg19::chr2:138722104..138722115,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:138722104..138722115,+ to FFCP PHASE1:Hg19::chr2:138722104..138722115,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3176 | |EntrezGene=3176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5028 | |HGNC=5028 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000480534_5end | |||
|cluster_id=chr2:138722104..138722115,+ | |||
|description=CAGE_peak_5_at_HNMT_5end | |||
|id=chr2:138722104..138722115,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.93e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000990;4.07e-12;8!CL:0002615;4.07e-10;3!CL:0000451;8.71e-10;10!CL:0000136;1.32e-08;13!CL:0000840;2.78e-08;5!CL:0002617;4.72e-08;2!CL:0002195;5.01e-07;2!CL:0002571;5.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.29e-12,8;CL:0000451,3.46e-10,10;CL:0002615,5.28e-10,3;CL:0000136,9.97e-10,15;CL:0000840,7.54e-09,5;CL:0001029,7.54e-09,5;CL:0002617,4.60e-08,2;CL:0000048,2.06e-07,427;CL:0000134,2.55e-07,354;CL:0002195,3.06e-07,2;CL:0002571,3.06e-07,2;CL:0000723,3.74e-07,433;CL:0002320,5.51e-07,361;CL:0000034,8.07e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.21e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.93e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.85e-07!448;UBERON:0004120!1.85e-07!448;UBERON:0006603!1.85e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.54e-08;6!UBERON:0002358;1.54e-08;6!UBERON:0003684;1.54e-08;6!UBERON:0001178;1.54e-08;6!UBERON:0004457;1.91e-08;9!UBERON:0000042;1.91e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.21e-08,12;UBERON:0000042,1.21e-08,12;UBERON:0003688,1.57e-08,6;UBERON:0002358,1.57e-08,6;UBERON:0003684,1.57e-08,6;UBERON:0001178,1.57e-08,6 | |||
|phase1_expression=5.26867299884614,2.35510576280081,1.83240725324762,1.0007329835313,2.23480547213644,2.61701557230111,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,1.46062018077475,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.671746422719773,2.26725566213286,0.77272670290256,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,0.722878304769133,0,0.144846518960824,0,0,0.189069634328136,0,0,0.589405839739707,0,0,1.9472843619281,1.91542711029194,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0,1.05166641234618,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,4.18568910348575,0.936017060556951,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.901029173531752,0.571652865261156,0,0,0,0.258543431515556,0,0,2.6593811658487,0,0,0,0,1.42977993658148,0,0,0,1.77695974371273,0.791951872933429,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0,0,0,1.01346914667305,0,0.537182889719687,0,0,0,0,1.27047312111232,0,0,0.670065061337395,0,0,0,0,0,0,0.542530047399471,1.66376689224646,0,1.57702415033935,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,2.30192959932094,3.64858122762996,0.768834895534206,1.53512174720011,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0,0,0.918515585316854,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0.42793898803392,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,2.04749867111979,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,1.07001315444375,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,1.22896305723383,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,0,0.511572370226872,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.530745387020035,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.201550417460179,0,0,2.91497774536727,2.88455504334083,2.83094884187577,0.0984274815147488,0,0,0.136203406111576,0,0,0,1.799791132412,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,1.42939065274673,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0.171086837884329,0,0.747511887973863,0.314408610199332,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.447764408660622,1.40227985908335,1.10961172300523,0.568209015825267,1.50940741051545,0,0.228840068396924,0.604923695052956,0.310874401165561,0,0.159296767163702,1.34940933649081,0.155262956876259,0.414706207840855,0.797525143673985,1.04349012362347,1.50257608997218,0,0.813741466409323,1.63663793282303,0.214821114084977,0,1.99047944349308,0,1.37358282073117,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,2.25870228532717,0.981392365535065,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.9811912055916,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,2.78482710962785,0.82731361184183,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,1.54339208493677,0.0679697329768317,0,0,0,1.17739639275771,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,2.12525320415805,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,1.47088993052343,0,0.392616934229891,0,0,0,1.2217909337381,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0.252332849670158,0,0,0,0,0,0,0.909344378618873,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0,0,0.134704106029175,0.358611026963382,0,0,0,0,0,4.69281884806909,4.88965776731466,1.22068853494722,1.33151354837103,0.402547587182052,0 | |phase1_expression=5.26867299884614,2.35510576280081,1.83240725324762,1.0007329835313,2.23480547213644,2.61701557230111,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,1.46062018077475,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.671746422719773,2.26725566213286,0.77272670290256,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,0.722878304769133,0,0.144846518960824,0,0,0.189069634328136,0,0,0.589405839739707,0,0,1.9472843619281,1.91542711029194,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0,1.05166641234618,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,4.18568910348575,0.936017060556951,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.901029173531752,0.571652865261156,0,0,0,0.258543431515556,0,0,2.6593811658487,0,0,0,0,1.42977993658148,0,0,0,1.77695974371273,0.791951872933429,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0,0,0,1.01346914667305,0,0.537182889719687,0,0,0,0,1.27047312111232,0,0,0.670065061337395,0,0,0,0,0,0,0.542530047399471,1.66376689224646,0,1.57702415033935,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,2.30192959932094,3.64858122762996,0.768834895534206,1.53512174720011,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,0,0,0.918515585316854,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0.42793898803392,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,2.04749867111979,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,1.07001315444375,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,1.22896305723383,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,0,0.511572370226872,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.530745387020035,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.201550417460179,0,0,2.91497774536727,2.88455504334083,2.83094884187577,0.0984274815147488,0,0,0.136203406111576,0,0,0,1.799791132412,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,1.42939065274673,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0.171086837884329,0,0.747511887973863,0.314408610199332,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.447764408660622,1.40227985908335,1.10961172300523,0.568209015825267,1.50940741051545,0,0.228840068396924,0.604923695052956,0.310874401165561,0,0.159296767163702,1.34940933649081,0.155262956876259,0.414706207840855,0.797525143673985,1.04349012362347,1.50257608997218,0,0.813741466409323,1.63663793282303,0.214821114084977,0,1.99047944349308,0,1.37358282073117,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,2.25870228532717,0.981392365535065,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,3.9811912055916,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,2.78482710962785,0.82731361184183,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,1.54339208493677,0.0679697329768317,0,0,0,1.17739639275771,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,2.12525320415805,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,1.47088993052343,0,0.392616934229891,0,0,0,1.2217909337381,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0.252332849670158,0,0,0,0,0,0,0.909344378618873,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0,0,0.134704106029175,0.358611026963382,0,0,0,0,0,4.69281884806909,4.88965776731466,1.22068853494722,1.33151354837103,0.402547587182052,0 | ||
|short_description=p5@HNMT | |||
}} | }} |
Latest revision as of 03:56, 17 September 2015
Short description: | p5@HNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HNMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000480534_5end |
EntrezGene: | HNMT |
HGNC: | 5028 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.29e-12 | 8 |
dendritic cell | 3.46e-10 | 10 |
adipocyte of omentum tissue | 5.28e-10 | 3 |
fat cell | 9.97e-10 | 15 |
immature conventional dendritic cell | 7.54e-09 | 5 |
common dendritic progenitor | 7.54e-09 | 5 |
adipocyte of breast | 4.60e-08 | 2 |
multi fate stem cell | 2.06e-07 | 427 |
mesenchymal cell | 2.55e-07 | 354 |
hepatic stem cell | 3.06e-07 | 2 |
hepatic mesenchymal stem cell | 3.06e-07 | 2 |
somatic stem cell | 3.74e-07 | 433 |
connective tissue cell | 5.51e-07 | 361 |
stem cell | 8.07e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.21e-08 | 12 |
serous membrane | 1.21e-08 | 12 |
omentum | 1.57e-08 | 6 |
peritoneum | 1.57e-08 | 6 |
abdominal cavity | 1.57e-08 | 6 |
visceral peritoneum | 1.57e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.93e-07 | 14 |