FFCP PHASE1:Hg19::chr19:3061274..3061306,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:3061274..3061306,-
|short_description=p8@AES
|description=CAGE_peak_8_at_AES_5end
|association_with_transcript=-28bp_to_X73358_5end
|EntrezGene=166
|HGN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166 | |EntrezGene=166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |HGNC=307 | ||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |UniProt=Q08117 | ||
|association_with_transcript=-28bp_to_X73358_5end | |||
|cluster_id=chr19:3061274..3061306,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_AES_5end | |||
|id=chr19:3061274..3061306,- | |||
|ontology_enrichment_celltype=CL:0000542!1.60e-11!53;CL:0000051!1.60e-11!53;CL:0000791!1.79e-11!18;CL:0000789!1.79e-11!18;CL:0002420!1.79e-11!18;CL:0002419!1.79e-11!18;CL:0000790!1.79e-11!18;CL:0000838!2.21e-11!52;CL:0000625!2.27e-08!11;CL:0000084!3.51e-08!25;CL:0000827!3.51e-08!25;CL:0000236!9.19e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.60e-15;18!CL:0000789;2.60e-15;18!CL:0002419;2.60e-15;18!CL:0000084;5.69e-12;25!CL:0000236;7.77e-12;13!CL:0000542;2.92e-11;53!CL:0000625;2.96e-11;11!CL:0000624;5.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.17e-17,53;CL:0000051,6.17e-17,53;CL:0000838,9.68e-17,52;CL:0000791,3.01e-15,18;CL:0000789,3.01e-15,18;CL:0002420,3.01e-15,18;CL:0002419,3.01e-15,18;CL:0000790,3.01e-15,18;CL:0000084,7.17e-12,25;CL:0000827,7.17e-12,25;CL:0000625,3.27e-11,11;CL:0000236,1.97e-10,14;CL:0000624,5.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.60e-15;18!CL:0000051;2.92e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.93e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.82e-08;15!UBERON:0000179;5.82e-08;15!UBERON:0000463;5.82e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.17e-10,114;UBERON:0000178,6.34e-08,15;UBERON:0000179,6.34e-08,15;UBERON:0000463,6.34e-08,15 | |||
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| ||
|short_description=p8@AES | |||
}} | }} |
Latest revision as of 04:20, 17 September 2015
Short description: | p8@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AES_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -28bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.17e-17 | 53 |
common lymphoid progenitor | 6.17e-17 | 53 |
lymphoid lineage restricted progenitor cell | 9.68e-17 | 52 |
mature alpha-beta T cell | 3.01e-15 | 18 |
alpha-beta T cell | 3.01e-15 | 18 |
immature T cell | 3.01e-15 | 18 |
mature T cell | 3.01e-15 | 18 |
immature alpha-beta T cell | 3.01e-15 | 18 |
T cell | 7.17e-12 | 25 |
pro-T cell | 7.17e-12 | 25 |
CD8-positive, alpha-beta T cell | 3.27e-11 | 11 |
B cell | 1.97e-10 | 14 |
CD4-positive, alpha-beta T cell | 5.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.17e-10 | 114 |
blood | 6.34e-08 | 15 |
haemolymphatic fluid | 6.34e-08 | 15 |
organism substance | 6.34e-08 | 15 |