FFCP PHASE1:Hg19::chr8:17780346..17780375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5108 | |EntrezGene=5108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8727 | |HGNC=8727 | ||
|TSSclassifier=strong | |||
|UniProt=Q15154,C9JBL6,A2RUU9 | |UniProt=Q15154,C9JBL6,A2RUU9 | ||
|association_with_transcript=0bp_to_ENST00000325083,ENST00000325126,NM_006197,uc003wyg.2,uc003wyh.2,uc003wyi.3,uc010lta.1,uc011kyh.1_5end | |association_with_transcript=0bp_to_ENST00000325083,ENST00000325126,NM_006197,uc003wyg.2,uc003wyh.2,uc003wyi.3,uc010lta.1,uc011kyh.1_5end | ||
|cluster_id=chr8:17780346..17780375,+ | |||
|description=CAGE_peak_2_at_PCM1_5end | |description=CAGE_peak_2_at_PCM1_5end | ||
|id=chr8:17780346..17780375,+ | |id=chr8:17780346..17780375,+ | ||
|ontology_enrichment_celltype=CL:0002032!5.17e-28!165;CL:0000837!5.17e-28!165;CL:0000037!2.62e-27!172;CL:0000566!2.62e-27!172;CL:0000763!4.85e-26!112;CL:0000049!4.85e-26!112;CL:0000738!3.88e-24!140;CL:0002031!3.17e-23!124;CL:0000988!4.91e-23!182;CL:0000766!1.05e-22!76;CL:0002087!3.10e-22!119;CL:0000839!7.82e-22!70;CL:0002009!9.43e-22!65;CL:0000557!1.87e-21!71;CL:0002194!4.76e-21!63;CL:0000576!4.76e-21!63;CL:0000040!4.76e-21!63;CL:0000559!4.76e-21!63;CL:0000860!1.41e-18!45;CL:0002057!1.45e-17!42;CL:0000134!3.00e-07!358 | |ontology_enrichment_celltype=CL:0002032!5.17e-28!165;CL:0000837!5.17e-28!165;CL:0000037!2.62e-27!172;CL:0000566!2.62e-27!172;CL:0000763!4.85e-26!112;CL:0000049!4.85e-26!112;CL:0000738!3.88e-24!140;CL:0002031!3.17e-23!124;CL:0000988!4.91e-23!182;CL:0000766!1.05e-22!76;CL:0002087!3.10e-22!119;CL:0000839!7.82e-22!70;CL:0002009!9.43e-22!65;CL:0000557!1.87e-21!71;CL:0002194!4.76e-21!63;CL:0000576!4.76e-21!63;CL:0000040!4.76e-21!63;CL:0000559!4.76e-21!63;CL:0000860!1.41e-18!45;CL:0002057!1.45e-17!42;CL:0000134!3.00e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-14;33!CL:0002057;1.06e-14;33!CL:0000576;4.87e-14;48!CL:0000473;4.11e-12;39!CL:0000234;4.11e-12;39!CL:0000766;9.99e-10;69!CL:0000763;4.46e-08;100!CL:0002087;8.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.73e-27,161;CL:0000837,4.73e-27,161;CL:0000037,2.38e-26,168;CL:0000763,2.95e-25,108;CL:0000049,2.95e-25,108;CL:0000738,2.89e-23,136;CL:0000988,1.29e-22,177;CL:0002031,2.29e-22,120;CL:0000766,4.56e-22,72;CL:0002087,2.20e-21,115;CL:0000839,3.26e-21,66;CL:0002009,3.68e-21,61;CL:0000557,7.95e-21,67;CL:0002194,1.85e-20,59;CL:0000576,1.85e-20,59;CL:0000040,1.85e-20,59;CL:0000559,1.85e-20,59;CL:0000860,1.31e-17,42;CL:0002057,1.31e-17,42;CL:0000473,5.04e-17,48;CL:0000234,5.04e-17,48;CL:0000134,4.94e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.78e-13;42!CL:0000049;1.17e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.75e-22!102;UBERON:0003061!4.75e-22!102;UBERON:0002193!7.84e-19!112;UBERON:0002371!2.51e-17!80;UBERON:0001474!6.48e-16!86;UBERON:0002405!2.89e-14!115;UBERON:0004765!1.68e-13!101;UBERON:0001434!1.68e-13!101;UBERON:0007023!4.40e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.71e-21,98;UBERON:0003061,1.71e-21,98;UBERON:0002193,3.28e-18,108;UBERON:0002371,8.55e-17,76;UBERON:0001474,2.31e-15,82;UBERON:0002405,1.71e-14,93;UBERON:0004765,7.21e-14,90;UBERON:0007023,6.46e-12,114;UBERON:0001434,1.19e-11,100 | |||
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| ||
|short_description=p2@PCM1 | |short_description=p2@PCM1 | ||
}} | }} |
Latest revision as of 05:39, 17 September 2015
Short description: | p2@PCM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325083, ENST00000325126, NM_006197, uc003wyg.2, uc003wyh.2, uc003wyi.3, uc010lta.1, uc011kyh.1_5end |
EntrezGene: | PCM1 |
HGNC: | 8727 |
UniProt: | Q15154C9JBL6A2RUU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data