FFCP PHASE1:Hg19::chr6:24358226..24358239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=40bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |association_with_transcript=40bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | ||
|cluster_id=chr6:24358226..24358239,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_3_at_DCDC2_5end | |description=CAGE_peak_3_at_DCDC2_5end | ||
|id=chr6:24358226..24358239,- | |id=chr6:24358226..24358239,- | ||
|ontology_enrichment_celltype=CL:1000507!1.18e-17!12;CL:1000494!1.18e-17!12;CL:1000497!1.30e-15!18;CL:0002518!1.30e-15!18;CL:1000449!4.23e-15!16;CL:0000066!7.06e-11!254;CL:0002681!5.26e-10!13;CL:0002584!5.26e-10!13;CL:0000239!7.52e-08!3;CL:1000615!7.52e-08!3;CL:0002306!7.52e-08!3 | |ontology_enrichment_celltype=CL:1000507!1.18e-17!12;CL:1000494!1.18e-17!12;CL:1000497!1.30e-15!18;CL:0002518!1.30e-15!18;CL:1000449!4.23e-15!16;CL:0000066!7.06e-11!254;CL:0002681!5.26e-10!13;CL:0002584!5.26e-10!13;CL:0000239!7.52e-08!3;CL:1000615!7.52e-08!3;CL:0002306!7.52e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.16e-37;10!CL:1000494;4.16e-37;10!CL:1000497;3.68e-25;17!CL:0002518;3.68e-25;17!CL:1000449;4.92e-24;15!CL:0002681;4.78e-15;12!CL:0002584;4.78e-15;12!CL:0000239;1.24e-12;3!CL:1000615;1.24e-12;3!CL:0002306;1.24e-12;3!CL:0002149;3.32e-10;6!CL:0002255;3.32e-10;6!CL:0000650;1.60e-08;2!CL:1000500;1.60e-08;2!CL:1000618;1.60e-08;2!CL:1001318;1.60e-08;2!CL:0002173;1.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.87e-37,10;CL:1000494,2.87e-37,10;CL:1000497,2.72e-25,17;CL:0002518,2.72e-25,17;CL:1000449,3.86e-24,15;CL:0002681,3.96e-15,12;CL:0002584,3.96e-15,12;CL:0000066,1.44e-13,253;CL:0000239,1.11e-12,3;CL:1000615,1.11e-12,3;CL:0002306,1.11e-12,3;CL:0002149,3.13e-10,6;CL:0002255,3.13e-10,6;CL:0000650,1.43e-08,2;CL:1000500,1.43e-08,2;CL:1000618,1.43e-08,2;CL:1001318,1.43e-08,2;CL:0002173,1.43e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.26e-10;31!UBERON:0004161;2.20e-08;11!UBERON:0009497;4.84e-07;13 | |||
|ontology_enrichment_disease=DOID:193!5.72e-13!29;DOID:299!3.71e-12!25;DOID:120!1.21e-10!27;DOID:0050687!1.33e-10!143;DOID:305!1.33e-10!106;DOID:162!5.81e-08!235;DOID:14566!1.47e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;1.49e-19;25!DOID:120;9.37e-15;27!DOID:193;1.42e-13;29!DOID:3001;3.32e-10;6!DOID:4468;3.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.58e-19,25;DOID:120,1.27e-14,27;DOID:305,2.45e-14,106;DOID:193,1.87e-13,29;DOID:0050687,2.19e-12,143;DOID:3001,3.13e-10,6;DOID:162,3.44e-09,235;DOID:4468,3.58e-09,2;DOID:14566,7.63e-09,239;DOID:0050686,8.10e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.78e-19!27;UBERON:0003918!2.78e-19!27;UBERON:0005095!2.78e-19!27;UBERON:0007687!2.78e-19!27;UBERON:0005172!1.16e-17!55;UBERON:0005173!1.16e-17!55;UBERON:0009773!1.18e-17!12;UBERON:0001231!1.18e-17!12;UBERON:0004810!1.18e-17!12;UBERON:0000489!2.27e-17!32;UBERON:0006555!7.98e-17!17;UBERON:0005103!7.98e-17!17;UBERON:0000083!7.98e-17!17;UBERON:0009201!7.98e-17!17;UBERON:0004819!7.98e-17!17;UBERON:0006553!7.98e-17!17;UBERON:0003074!7.98e-17!17;UBERON:0003060!7.98e-17!17;UBERON:0003886!1.03e-16!63;UBERON:0000466!3.45e-16!126;UBERON:0000080!1.05e-15!18;UBERON:0002120!1.05e-15!18;UBERON:0004875!1.05e-15!18;UBERON:0005721!1.05e-15!18;UBERON:0005754!1.05e-15!18;UBERON:0007297!1.05e-15!18;UBERON:0002553!1.17e-15!70;UBERON:0002417!3.36e-15!61;UBERON:0000916!3.36e-15!61;UBERON:0004211!4.23e-15!16;UBERON:0001285!4.23e-15!16;UBERON:0007684!4.23e-15!16;UBERON:0003220!4.23e-15!16;UBERON:0004208!4.23e-15!16;UBERON:0000464!1.86e-14!104;UBERON:0005177!4.18e-14!107;UBERON:0006554!4.99e-14!44;UBERON:0004876!8.39e-14!20;UBERON:0001008!1.37e-13!45;UBERON:0003887!5.45e-13!21;UBERON:0009569!4.48e-12!113;UBERON:0000058!1.40e-11!26;UBERON:0003133!2.43e-11!48;UBERON:0003064!7.79e-11!37;UBERON:0005156!2.52e-10!59;UBERON:0000990!2.52e-10!59;UBERON:0001225!5.26e-10!13;UBERON:0008987!5.26e-10!13;UBERON:0001851!1.16e-09!16;UBERON:0003134!1.37e-08!37;UBERON:0000474!1.37e-08!37;UBERON:0006853!7.52e-08!3;UBERON:0007685!7.52e-08!3;UBERON:0004134!7.52e-08!3;UBERON:0005911!9.97e-08!82;UBERON:0003929!1.40e-07!54;UBERON:0000991!2.08e-07!21;UBERON:0009196!2.08e-07!21;UBERON:0009117!2.08e-07!21;UBERON:0005564!2.08e-07!21;UBERON:0003100!2.10e-07!41;UBERON:0000353!2.99e-07!17;UBERON:0000062!3.82e-07!511;UBERON:0003103!4.52e-07!69;UBERON:0004176!5.59e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.16e-37;10!UBERON:0009773;4.16e-37;10!UBERON:0001231;4.16e-37;10!UBERON:0004810;4.16e-37;10!UBERON:0002113;4.49e-24;24!UBERON:0011143;4.49e-24;24!UBERON:0006555;4.92e-24;15!UBERON:0004819;4.92e-24;15!UBERON:0001285;4.92e-24;15!UBERON:0007684;4.92e-24;15!UBERON:0000489;2.15e-19;29!UBERON:0006554;1.20e-18;30!UBERON:0001008;1.20e-18;30!UBERON:0001225;4.78e-15;12!UBERON:0008987;4.78e-15;12!UBERON:0005172;8.29e-14;52!UBERON:0005173;8.29e-14;52!UBERON:0006853;1.24e-12;3!UBERON:0007685;1.24e-12;3!UBERON:0004134;1.24e-12;3!UBERON:0001851;7.98e-12;15!UBERON:0000353;7.98e-12;15!UBERON:0002417;4.71e-11;58!UBERON:0000916;4.71e-11;58!UBERON:0003567;1.60e-08;2!UBERON:0003838;1.60e-08;2!UBERON:0003586;1.60e-08;2!UBERON:0005169;1.60e-08;2!UBERON:0002321;1.60e-08;2!UBERON:0005215;1.60e-08;2!UBERON:0002303;1.60e-08;2!UBERON:0002319;1.60e-08;2!UBERON:0004175;1.00e-07;21!UBERON:0003134;2.07e-07;33!UBERON:0000995;2.92e-07;17!UBERON:0003975;8.03e-07;18!UBERON:0000474;8.07e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.87e-37,10;UBERON:0006555,3.35e-27,16;UBERON:0004819,3.35e-27,16;UBERON:0002113,7.54e-26,26;UBERON:0003918,7.54e-26,26;UBERON:0011143,7.54e-26,26;UBERON:0005095,7.54e-26,26;UBERON:0007687,7.54e-26,26;UBERON:0004211,3.86e-24,15;UBERON:0009773,3.86e-24,15;UBERON:0001231,3.86e-24,15;UBERON:0001285,3.86e-24,15;UBERON:0007684,3.86e-24,15;UBERON:0004208,3.86e-24,15;UBERON:0005172,3.95e-23,54;UBERON:0005173,3.95e-23,54;UBERON:0000489,3.95e-21,31;UBERON:0002417,2.62e-20,60;UBERON:0000916,2.62e-20,60;UBERON:0005177,1.55e-15,101;UBERON:0001225,3.96e-15,12;UBERON:0008987,3.96e-15,12;UBERON:0009569,8.08e-15,112;UBERON:0006554,8.37e-13,47;UBERON:0006853,1.11e-12,3;UBERON:0007685,1.11e-12,3;UBERON:0004134,1.11e-12,3;UBERON:0001008,1.81e-12,48;UBERON:0001851,6.88e-12,15;UBERON:0000353,6.88e-12,15;UBERON:0003103,4.09e-09,68;UBERON:0003567,1.43e-08,2;UBERON:0003838,1.43e-08,2;UBERON:0003586,1.43e-08,2;UBERON:0005169,1.43e-08,2;UBERON:0002321,1.43e-08,2;UBERON:0005215,1.43e-08,2;UBERON:0002303,1.43e-08,2;UBERON:0002319,1.43e-08,2 | |||
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| ||
|short_description=p3@DCDC2 | |short_description=p3@DCDC2 | ||
}} | }} |
Latest revision as of 05:43, 17 September 2015
Short description: | p3@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 40bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.87e-37 | 10 |
nephron tubule epithelial cell | 2.87e-37 | 10 |
kidney cell | 2.72e-25 | 17 |
kidney epithelial cell | 2.72e-25 | 17 |
epithelial cell of nephron | 3.86e-24 | 15 |
kidney cortical cell | 3.96e-15 | 12 |
renal cortical epithelial cell | 3.96e-15 | 12 |
epithelial cell | 1.44e-13 | 253 |
brush border epithelial cell | 1.11e-12 | 3 |
kidney cortex tubule cell | 1.11e-12 | 3 |
epithelial cell of proximal tubule | 1.11e-12 | 3 |
epithelial cell of uterus | 3.13e-10 | 6 |
stromal cell of endometrium | 3.13e-10 | 6 |
mesangial cell | 1.43e-08 | 2 |
kidney interstitial cell | 1.43e-08 | 2 |
juxtaglomerular complex cell | 1.43e-08 | 2 |
renal interstitial pericyte | 1.43e-08 | 2 |
extraglomerular mesangial cell | 1.43e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.58e-19 | 25 |
female reproductive organ cancer | 1.27e-14 | 27 |
carcinoma | 2.45e-14 | 106 |
reproductive organ cancer | 1.87e-13 | 29 |
cell type cancer | 2.19e-12 | 143 |
female reproductive endometrioid cancer | 3.13e-10 | 6 |
cancer | 3.44e-09 | 235 |
clear cell adenocarcinoma | 3.58e-09 | 2 |
disease of cellular proliferation | 7.63e-09 | 239 |
organ system cancer | 8.10e-07 | 137 |