FFCP PHASE1:Hg19::chr16:58287947..58287958,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:58287947..58287958,+
|short_description=p@chr16:58287947..58287958,+
|description=CAGE_peak_at_chr16:58287947..58287958,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:58287947..58287958,+ | |||
|description=CAGE_peak_at_chr16:58287947..58287958,+ | |||
|id=chr16:58287947..58287958,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.08e-10!143;DOID:305!8.83e-10!106;DOID:14566!7.81e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:154;2.05e-15;2!DOID:4236;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.78e-15,2;DOID:4236,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.28e-13!41;UBERON:0001890!2.28e-13!41;UBERON:0006240!2.28e-13!41;UBERON:0003080!7.54e-13!42;UBERON:0000956!7.25e-12!25;UBERON:0000203!7.25e-12!25;UBERON:0001049!1.06e-11!57;UBERON:0005068!1.06e-11!57;UBERON:0006241!1.06e-11!57;UBERON:0007135!1.06e-11!57;UBERON:0001017!1.09e-11!82;UBERON:0001893!1.13e-11!34;UBERON:0001869!1.48e-11!32;UBERON:0000955!2.19e-11!69;UBERON:0006238!2.19e-11!69;UBERON:0002791!3.82e-11!33;UBERON:0002616!4.18e-11!59;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0005743!1.34e-10!86;UBERON:0000073!3.11e-10!94;UBERON:0001016!3.11e-10!94;UBERON:0002619!8.06e-10!22;UBERON:0001950!6.16e-08!20;UBERON:0003056!5.43e-07!61;UBERON:0000033!9.80e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;3.28e-17;6!UBERON:0002771;1.24e-15;2!UBERON:0001876;2.05e-15;2!UBERON:0000007;2.05e-15;2!UBERON:0002114;9.90e-11;2!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0002108;6.04e-07;4!UBERON:0000349;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.90e-17,6;UBERON:0002771,1.33e-15,2;UBERON:0001876,1.54e-15,2;UBERON:0000007,2.37e-15,2;UBERON:0002114,1.20e-10,2;UBERON:0003296,2.43e-08,4;UBERON:0010133,2.43e-08,4;UBERON:0000349,5.38e-07,5;UBERON:0002108,6.77e-07,4;UBERON:0002780,9.05e-07,41;UBERON:0001890,9.05e-07,41;UBERON:0003080,9.05e-07,41;UBERON:0006240,9.05e-07,41 | |||
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| ||
|short_description=p@chr16:58287947..58287958,+ | |||
}} | }} |
Latest revision as of 05:47, 17 September 2015
Short description: | p@chr16:58287947..58287958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:58287947..58287958, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.90e-17 | 6 |
middle temporal gyrus | 1.33e-15 | 2 |
amygdala | 1.54e-15 | 2 |
pituitary gland | 2.37e-15 | 2 |
duodenum | 1.20e-10 | 2 |
gland of diencephalon | 2.43e-08 | 4 |
neuroendocrine gland | 2.43e-08 | 4 |
limbic system | 5.38e-07 | 5 |
small intestine | 6.77e-07 | 4 |
regional part of forebrain | 9.05e-07 | 41 |
forebrain | 9.05e-07 | 41 |
anterior neural tube | 9.05e-07 | 41 |
future forebrain | 9.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.78e-15 | 2 |
carcinosarcoma | 1.78e-15 | 2 |