FFCP PHASE1:Hg19::chr1:153580615..153580646,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20441 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_DQ893590,DQ894939_5end | |||
|cluster_id=chr1:153580615..153580646,- | |||
|description=CAGE_peak_11_at_S100A16_5end | |||
|id=chr1:153580615..153580646,- | |||
|ontology_enrichment_celltype=CL:0000220!2.72e-29!246;CL:0002321!8.20e-29!248;CL:0000066!2.54e-23!254;CL:0000222!2.38e-20!119;CL:0000115!2.63e-15!35;CL:0002139!6.89e-15!24;CL:0002078!9.22e-15!44;CL:0000548!2.36e-14!679;CL:0000004!2.36e-14!679;CL:0000255!2.36e-14!679;CL:0000012!1.02e-13!682;CL:0000213!1.21e-13!57;CL:0000215!1.21e-13!57;CL:0000071!1.14e-12!18;CL:0002546!1.14e-12!18;CL:0000144!4.25e-11!625;CL:0000055!1.66e-10!180;CL:0002371!1.80e-10!591;CL:0000076!6.84e-10!62;CL:0002076!2.96e-08!43;CL:0000057!1.42e-07!75;CL:0000223!1.58e-07!59;CL:0002368!2.18e-07!13;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57;CL:0000183!5.54e-07!59;CL:0000192!6.66e-07!42;CL:0000514!6.66e-07!42;CL:0000359!7.38e-07!32;CL:0000003!7.92e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.26e-23;24!CL:0000115;9.53e-22;36!CL:0000071;6.17e-21;18!CL:0002078;4.41e-14;45!CL:0000213;4.23e-12;58!CL:0000215;4.23e-12;58!CL:1000413;1.56e-10;9!CL:0002543;2.15e-08;6!CL:0002368;5.03e-08;13!CL:0000076;5.30e-07;63!CL:0002544;5.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.68e-26,36;CL:0002321,4.07e-24,250;CL:0002139,1.15e-23,24;CL:0002078,1.01e-21,45;CL:0000071,6.87e-21,18;CL:0002546,6.87e-21,18;CL:0000222,2.13e-20,121;CL:0000213,8.62e-19,58;CL:0000215,8.62e-19,58;CL:0000066,7.36e-18,253;CL:0000076,1.16e-11,63;CL:1000413,2.04e-10,9;CL:0002543,2.02e-08,6;CL:0002076,3.13e-08,42;CL:0002368,5.84e-08,13;CL:0002544,6.99e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.17e-21;18!CL:0000222;3.52e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.52e-20!79;UBERON:0007798!2.52e-20!79;UBERON:0000055!5.63e-20!69;UBERON:0003914!2.48e-19!118;UBERON:0001981!2.13e-18!60;UBERON:0007500!2.13e-18!60;UBERON:0004537!2.13e-18!60;UBERON:0006965!2.13e-18!60;UBERON:0004872!3.32e-18!84;UBERON:0002100!3.60e-16!216;UBERON:0000490!9.55e-15!138;UBERON:0005256!2.14e-14!143;UBERON:0000119!1.19e-13!312;UBERON:0000483!1.23e-13!309;UBERON:0000487!1.33e-13!22;UBERON:0000468!2.01e-13!659;UBERON:0001637!3.96e-13!42;UBERON:0003509!3.96e-13!42;UBERON:0004572!3.96e-13!42;UBERON:0001986!1.14e-12!18;UBERON:0004638!1.14e-12!18;UBERON:0004852!1.14e-12!18;UBERON:0000475!2.85e-12!365;UBERON:0004535!3.26e-12!110;UBERON:0006914!3.27e-12!25;UBERON:0000477!4.65e-12!286;UBERON:0000467!6.84e-12!625;UBERON:0001009!7.07e-12!113;UBERON:0003104!1.04e-11!238;UBERON:0009142!1.04e-11!238;UBERON:0000480!1.06e-11!626;UBERON:0004111!4.33e-11!241;UBERON:0000914!2.24e-10!83;UBERON:0002329!2.24e-10!83;UBERON:0003077!2.24e-10!83;UBERON:0003059!2.24e-10!83;UBERON:0007282!2.24e-10!83;UBERON:0009618!2.24e-10!83;UBERON:0007285!2.24e-10!83;UBERON:0000486!2.85e-10!82;UBERON:0004573!2.09e-09!33;UBERON:0004571!2.09e-09!33;UBERON:0000481!2.91e-09!347;UBERON:0003102!1.03e-08!95;UBERON:0000926!1.16e-08!448;UBERON:0004120!1.16e-08!448;UBERON:0006603!1.16e-08!448;UBERON:0000923!3.55e-08!604;UBERON:0005291!3.55e-08!604;UBERON:0006598!3.55e-08!604;UBERON:0002532!3.55e-08!604;UBERON:0004290!3.95e-08!70;UBERON:0002050!5.08e-08!605;UBERON:0005423!5.08e-08!605;UBERON:0000922!1.23e-07!612;UBERON:0009569!4.37e-07!113;UBERON:0000025!5.60e-07!194;UBERON:0000915!6.47e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.17e-21;18!UBERON:0001986;6.17e-21;18!UBERON:0004852;6.17e-21;18!UBERON:0000487;2.07e-19;22!UBERON:0000490;2.66e-17;33!UBERON:0006914;3.18e-16;25!UBERON:0007500;2.15e-13;56!UBERON:0001981;2.15e-13;56!UBERON:0004537;2.15e-13;56!UBERON:0003914;1.07e-12;74!UBERON:0000055;2.10e-12;65!UBERON:0001637;5.10e-12;42!UBERON:0003509;5.10e-12;42!UBERON:0004572;5.10e-12;42!UBERON:0003915;1.56e-10;9!UBERON:0004700;1.56e-10;9!UBERON:0001917;1.56e-10;9!UBERON:0002049;7.40e-10;75!UBERON:0007798;7.40e-10;75!UBERON:0004573;3.02e-09;33!UBERON:0004571;3.02e-09;33!UBERON:0000025;1.10e-08;93!UBERON:0004111;1.34e-07;130!UBERON:0003513;2.90e-07;7!UBERON:0000119;2.92e-07;139!UBERON:0000353;4.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.18e-24,68;UBERON:0007500,1.28e-21,59;UBERON:0001981,1.28e-21,59;UBERON:0004537,1.28e-21,59;UBERON:0006965,1.28e-21,59;UBERON:0004638,6.87e-21,18;UBERON:0001986,6.87e-21,18;UBERON:0004852,6.87e-21,18;UBERON:0002049,1.23e-20,78;UBERON:0007798,1.23e-20,78;UBERON:0000487,1.84e-19,22;UBERON:0004872,2.24e-19,83;UBERON:0003914,1.28e-16,117;UBERON:0006914,2.88e-16,25;UBERON:0001637,3.95e-15,42;UBERON:0003509,3.95e-15,42;UBERON:0004572,3.95e-15,42;UBERON:0000490,6.05e-14,148;UBERON:0004535,2.00e-13,109;UBERON:0001009,1.14e-12,112;UBERON:0000483,1.30e-10,306;UBERON:0003915,2.04e-10,9;UBERON:0004700,2.04e-10,9;UBERON:0001917,2.04e-10,9;UBERON:0000119,2.85e-10,309;UBERON:0004573,6.96e-10,33;UBERON:0004571,6.96e-10,33;UBERON:0004111,1.60e-09,240;UBERON:0007503,1.80e-07,78;UBERON:0003513,2.41e-07,7;UBERON:0000353,4.40e-07,15;UBERON:0000915,5.04e-07,52 | |||
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| |||
|short_description=p11@S100A16 | |||
}} |
Latest revision as of 06:20, 17 September 2015
Short description: | p11@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_S100A16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_DQ893590, DQ894939_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.68e-26 | 36 |
embryonic cell | 4.07e-24 | 250 |
endothelial cell of vascular tree | 1.15e-23 | 24 |
meso-epithelial cell | 1.01e-21 | 45 |
blood vessel endothelial cell | 6.87e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.87e-21 | 18 |
mesodermal cell | 2.13e-20 | 121 |
lining cell | 8.62e-19 | 58 |
barrier cell | 8.62e-19 | 58 |
epithelial cell | 7.36e-18 | 253 |
squamous epithelial cell | 1.16e-11 | 63 |
endothelial cell of artery | 2.04e-10 | 9 |
vein endothelial cell | 2.02e-08 | 6 |
endo-epithelial cell | 3.13e-08 | 42 |
respiratory epithelial cell | 5.84e-08 | 13 |
aortic endothelial cell | 6.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.18e-24 | 68 |
epithelial tube open at both ends | 1.28e-21 | 59 |
blood vessel | 1.28e-21 | 59 |
blood vasculature | 1.28e-21 | 59 |
vascular cord | 1.28e-21 | 59 |
blood vessel endothelium | 6.87e-21 | 18 |
endothelium | 6.87e-21 | 18 |
cardiovascular system endothelium | 6.87e-21 | 18 |
vasculature | 1.23e-20 | 78 |
vascular system | 1.23e-20 | 78 |
simple squamous epithelium | 1.84e-19 | 22 |
splanchnic layer of lateral plate mesoderm | 2.24e-19 | 83 |
epithelial tube | 1.28e-16 | 117 |
squamous epithelium | 2.88e-16 | 25 |
artery | 3.95e-15 | 42 |
arterial blood vessel | 3.95e-15 | 42 |
arterial system | 3.95e-15 | 42 |
unilaminar epithelium | 6.05e-14 | 148 |
cardiovascular system | 2.00e-13 | 109 |
circulatory system | 1.14e-12 | 112 |
epithelium | 1.30e-10 | 306 |
endothelial tube | 2.04e-10 | 9 |
arterial system endothelium | 2.04e-10 | 9 |
endothelium of artery | 2.04e-10 | 9 |
cell layer | 2.85e-10 | 309 |
systemic artery | 6.96e-10 | 33 |
systemic arterial system | 6.96e-10 | 33 |
anatomical conduit | 1.60e-09 | 240 |
epithelial vesicle | 1.80e-07 | 78 |
trunk blood vessel | 2.41e-07 | 7 |
parenchyma | 4.40e-07 | 15 |
thoracic segment of trunk | 5.04e-07 | 52 |