FFCP PHASE1:Hg19::chr6:24667189..24667215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51567 | |EntrezGene=51567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17768 | |HGNC=17768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000545995_5end | |association_with_transcript=-9bp_to_ENST00000545995_5end | ||
|cluster_id=chr6:24667189..24667215,- | |||
|description=CAGE_peak_3_at_TDP2_5end | |description=CAGE_peak_3_at_TDP2_5end | ||
|id=chr6:24667189..24667215,- | |id=chr6:24667189..24667215,- | ||
|ontology_enrichment_celltype=CL:0000766!8.00e-15!76;CL:0000839!9.50e-14!70;CL:0002194!2.35e-13!63;CL:0000576!2.35e-13!63;CL:0000040!2.35e-13!63;CL:0000559!2.35e-13!63;CL:0002009!2.01e-12!65;CL:0000557!4.45e-12!71;CL:0000763!1.86e-11!112;CL:0000049!1.86e-11!112;CL:0000860!7.81e-10!45;CL:0002057!4.51e-09!42;CL:0000738!4.04e-07!140 | |ontology_enrichment_celltype=CL:0000766!8.00e-15!76;CL:0000839!9.50e-14!70;CL:0002194!2.35e-13!63;CL:0000576!2.35e-13!63;CL:0000040!2.35e-13!63;CL:0000559!2.35e-13!63;CL:0002009!2.01e-12!65;CL:0000557!4.45e-12!71;CL:0000763!1.86e-11!112;CL:0000049!1.86e-11!112;CL:0000860!7.81e-10!45;CL:0002057!4.51e-09!42;CL:0000738!4.04e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.83e-19;33!CL:0002057;7.83e-19;33!CL:0000473;1.34e-18;39!CL:0000234;1.34e-18;39!CL:0000576;8.10e-12;48!CL:0000766;1.05e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.07e-22,59;CL:0000576,4.07e-22,59;CL:0000040,4.07e-22,59;CL:0000559,4.07e-22,59;CL:0000766,4.61e-21,72;CL:0002009,7.44e-21,61;CL:0000839,5.94e-20,66;CL:0000557,1.90e-18,67;CL:0000473,2.66e-18,48;CL:0000234,2.66e-18,48;CL:0000763,6.56e-15,108;CL:0000049,6.56e-15,108;CL:0000860,8.58e-15,42;CL:0002057,8.58e-15,42;CL:0000738,3.15e-09,136;CL:0002087,4.67e-08,115;CL:0002031,5.09e-08,120;CL:0002032,1.49e-07,161;CL:0000837,1.49e-07,161;CL:0000037,5.59e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.52e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.70e-10!80;UBERON:0001474!1.29e-09!86;UBERON:0002390!1.62e-09!102;UBERON:0003061!1.62e-09!102;UBERON:0004765!1.11e-08!101;UBERON:0001434!1.11e-08!101;UBERON:0002405!1.76e-08!115;UBERON:0002193!3.77e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-16,76;UBERON:0002390,9.82e-16,98;UBERON:0003061,9.82e-16,98;UBERON:0001474,6.02e-15,82;UBERON:0002193,1.29e-12,108;UBERON:0002405,2.30e-12,93;UBERON:0004765,3.23e-12,90;UBERON:0001434,4.85e-12,100 | |||
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| ||
|short_description=p3@TDP2 | |short_description=p3@TDP2 | ||
}} | }} |
Latest revision as of 06:23, 17 September 2015
Short description: | p3@TDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000545995_5end |
EntrezGene: | TDP2 |
HGNC: | 17768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.07e-22 | 59 |
monocyte | 4.07e-22 | 59 |
monoblast | 4.07e-22 | 59 |
promonocyte | 4.07e-22 | 59 |
myeloid leukocyte | 4.61e-21 | 72 |
macrophage dendritic cell progenitor | 7.44e-21 | 61 |
myeloid lineage restricted progenitor cell | 5.94e-20 | 66 |
granulocyte monocyte progenitor cell | 1.90e-18 | 67 |
defensive cell | 2.66e-18 | 48 |
phagocyte | 2.66e-18 | 48 |
myeloid cell | 6.56e-15 | 108 |
common myeloid progenitor | 6.56e-15 | 108 |
classical monocyte | 8.58e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.58e-15 | 42 |
leukocyte | 3.15e-09 | 136 |
nongranular leukocyte | 4.67e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.09e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.49e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-07 | 161 |
hematopoietic stem cell | 5.59e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.04e-16 | 76 |
hematopoietic system | 9.82e-16 | 98 |
blood island | 9.82e-16 | 98 |
bone element | 6.02e-15 | 82 |
hemolymphoid system | 1.29e-12 | 108 |
immune system | 2.30e-12 | 93 |
skeletal element | 3.23e-12 | 90 |
skeletal system | 4.85e-12 | 100 |