FFCP PHASE1:Hg19::chr3:186857181..186857193,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:186857181..186857193,- to FFCP PHASE1:Hg19::chr3:186857181..186857193,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116832 | |EntrezGene=116832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17094 | |HGNC=17094 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EH5 | |UniProt=Q96EH5 | ||
|association_with_transcript=69bp_to_NM_052969,uc003fre.1,uc003frf.1_5end | |||
|cluster_id=chr3:186857181..186857193,- | |||
|description=CAGE_peak_3_at_RPL39L_5end | |||
|id=chr3:186857181..186857193,- | |||
|ontology_enrichment_celltype=CL:0000542!3.17e-15!53;CL:0000051!3.17e-15!53;CL:0000838!1.34e-14!52;CL:0000945!9.57e-09!24;CL:0000826!9.57e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.65e-11;7!CL:0000586;1.65e-11;7!CL:0000542;7.22e-10;53!CL:0000945;4.36e-08;24!CL:0002322;6.67e-08;5!CL:0000084;5.23e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.04e-16,53;CL:0000051,8.04e-16,53;CL:0000838,8.40e-15,52;CL:0000039,9.65e-12,7;CL:0000586,9.65e-12,7;CL:0002322,3.79e-08,5;CL:0000945,4.45e-08,24;CL:0000826,4.45e-08,24;CL:0000084,6.75e-07,25;CL:0000827,6.75e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;7.22e-10;53!UBERON:0009117;4.62e-08;10!UBERON:0005564;4.62e-08;10 | |||
|ontology_enrichment_disease=DOID:162!1.47e-12!235;DOID:14566!3.81e-12!239;DOID:305!2.94e-08!106;DOID:0050687!5.21e-08!143;DOID:0060058!1.78e-07!10;DOID:3095!4.12e-07!22;DOID:2994!4.12e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.01e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.91e-12,235;DOID:14566,8.95e-12,239;DOID:0060058,4.01e-10,10;DOID:2531,2.53e-09,51;DOID:0060083,2.53e-09,51;DOID:3095,8.02e-07,22;DOID:2994,8.02e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000072!5.90e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.44e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.33e-08,8;UBERON:0002370,9.61e-07,4;UBERON:0005058,9.61e-07,4;UBERON:0009113,9.61e-07,4;UBERON:0003295,9.61e-07,4;UBERON:0005562,9.61e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0.218441372130172,0.263766978228454,0,0.662794751455832,0.672325146451775,0,0,0,0.61560529038394,0.408001382488506,0.313454721478088,0.572471974262113,0.958120975510189,0.753255837568817,0.229240217243854,0.328402357799783,0.157421562627358,0.393364276848904,0.767658796194425,0,0,0.30120591877825,0.369754010166788,7.97912165977107,2.55904618477359,2.34880351467878,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,2.13365111283254,0.800791974072025,1.14950487990897,2.64417949113945,2.86216126360609,0.569212969109448,0.587237189370939,0,0,1.12101712596307,1.05353633910031,0,1.17903228824749,1.02800749499755,1.33749196312542,0.32592226663359,0.473447805734733,0,1.22551502573691,1.17842362989935,1.10766947291811,2.70803863765016,2.43373507478783,1.69077151827842,1.31550323682941,1.38175008892924,0.579606171470105,0.296573126324121,0,0,0.906474741580529,1.53288197440768,2.74901956386104,0.506039384039006,0.95569624297229,0,0,0.903450714466637,0.511946444617674,1.24930726552346,0.710331756132051,4.10563998460523,0,1.06976078313403,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.087834785693126,8.71010852059789,0.728590576585084,2.22470665670658,0.324547393654683,0,0,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.675668882899933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0.352303495931295,0.485618833104395,0.842704840213491,0,0.491337269247072,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0.30648779579902,0,1.24775401476023,0,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0,0.272746120590835,0,2.6834215348511,3.71083351300159,3.137236457477,1.65857688024593,2.77552935963191,0,1.56449532329816,0,0,0.464367928031979,0,0.709840800239063,1.01150814046861,1.20505514941741,1.21323370005633,1.08939722046203,0.71181185733329,1.21348177344148,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,7.50487269004906,0.122988438543114,0.171567810298526,0,1.1240175325762,0.804231779293047,0.0925884451585296,0.977424915930974,1.03993478527958,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.985143749731331,0.871901815541886,1.15014803749563,0.492663237895943,0,0,0,0.12624243342638,0,1.52795370223311,0,0,0,0,0.285826432630578,0.224262168690721,0.43596006883328,0.4400297149257,0,0,0,0.26593811658487,0,0,2.83698264046557,0,0,0,1.64648067356154,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,11.2085143993527,0.788123040807709,2.37190332345469,1.41177339907723,0.254094624222463,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.620304078368662,0.215714200818617,0.426910231213777,0.303127571446259,0,0.907170879989041,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.229628896329213,0.728364672026868,0,1.35359883872224,0.231046011313244,0.784349769176855,1.46139224653261,0,1.13733384070897,0.850468526382578,0.863663664408557,0,0.270946437543853,0,0.764628819135115,0.831076008928724,1.34324852833307,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.770243085573222,0,0.689182862422653,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0.767693373934002,0,0,1.56989728039846,0,0.274537029736055,0.824686816419805,0,0,0,0.975267478179181,0,0,0.272999822815972,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0.961416640147258,0,0.245040215981032,5.57409525377156,5.77076851905779,0,7.33360854552583,0,0,0,0.973865820823666,0.842391534340376,0,0,0,0,0,0,8.51692475380653,0,1.22896305723383,0.671028323677248,1.16794399198336,0.390776190804081,0,0,0,0,0,0,0,1.57768678274367,3.78907506543426,1.98895302764489,0,0,0,0,0.140669416410513,0,1.6480387422676,0.211125408127993,0.19924798825107,1.38141957765574,1.25966373927138,0,1.23084805461069,0,0,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0,0.185536196323703,0,1.30213880542617,0,0,2.61724931056649,6.35634125731916,2.36387681767936,0,0.291604613383254,0.694499979733169,0,0.241192877250816,0,0,0,0.219385397153973,2.94133851501273,0.975966209950223,0.0769502585037971,0,24.4397738651344,1.79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| 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| ||
|short_description=p3@RPL39L | |||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p3@RPL39L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPL39L_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_NM_052969, uc003fre.1, uc003frf.1_5end |
EntrezGene: | RPL39L |
HGNC: | 17094 |
UniProt: | Q96EH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.04e-16 | 53 |
common lymphoid progenitor | 8.04e-16 | 53 |
lymphoid lineage restricted progenitor cell | 8.40e-15 | 52 |
germ line cell | 9.65e-12 | 7 |
germ cell | 9.65e-12 | 7 |
embryonic stem cell | 3.79e-08 | 5 |
lymphocyte of B lineage | 4.45e-08 | 24 |
pro-B cell | 4.45e-08 | 24 |
T cell | 6.75e-07 | 25 |
pro-T cell | 6.75e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 6.33e-08 | 8 |
thymus | 9.61e-07 | 4 |
hemolymphoid system gland | 9.61e-07 | 4 |
thymic region | 9.61e-07 | 4 |
pharyngeal gland | 9.61e-07 | 4 |
thymus primordium | 9.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.91e-12 | 235 |
disease of cellular proliferation | 8.95e-12 | 239 |
lymphoma | 4.01e-10 | 10 |
hematologic cancer | 2.53e-09 | 51 |
immune system cancer | 2.53e-09 | 51 |
germ cell and embryonal cancer | 8.02e-07 | 22 |
germ cell cancer | 8.02e-07 | 22 |