FFCP PHASE1:Hg19::chr11:2018235..2018266,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |UniProt=Q9UHT2 | ||
|association_with_transcript=-218bp_to_AF118081_5end | |association_with_transcript=-218bp_to_AF118081_5end | ||
|cluster_id=chr11:2018235..2018266,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_7_at_AF118081_5end | |description=CAGE_peak_7_at_AF118081_5end | ||
|id=chr11:2018235..2018266,+ | |id=chr11:2018235..2018266,+ | ||
|ontology_enrichment_celltype=CL:0000188!5.95e-09!9 | |ontology_enrichment_celltype=CL:0000188!5.95e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.26e-25;19!CL:0002577;5.04e-12;3!CL:0002575;3.43e-08;2!CL:0002536;4.09e-08;2!CL:0002537;2.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.14e-25,19;CL:0002577,4.95e-12,3;CL:0002575,3.49e-08,2;CL:0002536,3.61e-08,2;CL:0002537,2.89e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.27e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!5.63e-17!19;UBERON:0005631!7.28e-16!14;UBERON:0000158!7.28e-16!14;UBERON:0001737!5.38e-14!9;UBERON:0000478!9.64e-13!24;UBERON:0003124!1.05e-11!7;UBERON:0003104!3.48e-09!238;UBERON:0009142!3.48e-09!238;UBERON:0004923!9.04e-09!57;UBERON:0000072!1.18e-08!46;UBERON:0001987!1.01e-07!4;UBERON:0004340!1.01e-07!4;UBERON:0004921!2.42e-07!129;UBERON:0004185!2.42e-07!129;UBERON:0000077!3.93e-07!130;UBERON:0004119!4.45e-07!169;UBERON:0000925!4.45e-07!169;UBERON:0006595!4.45e-07!169;UBERON:0000065!8.78e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.92e-29;9!UBERON:0001557;3.92e-29;9!UBERON:0000478;1.24e-26;24!UBERON:0005631;2.74e-17;10!UBERON:0000158;2.74e-17;10!UBERON:0001987;3.33e-15;4!UBERON:0000305;5.77e-13;7!UBERON:0000072;3.17e-08;37!UBERON:0001134;4.41e-07;16!UBERON:0002036;4.41e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.03e-30,14;UBERON:0000158,7.03e-30,14;UBERON:0001737,3.67e-29,9;UBERON:0000478,1.16e-26,24;UBERON:0001557,1.27e-19,19;UBERON:0003124,7.52e-19,7;UBERON:0001987,3.16e-15,4;UBERON:0004340,3.16e-15,4;UBERON:0000305,5.50e-13,7;UBERON:0004871,2.58e-11,8;UBERON:0000072,2.27e-09,47;UBERON:0004119,6.98e-08,160;UBERON:0000925,6.98e-08,160;UBERON:0006595,6.98e-08,160;UBERON:0000065,8.52e-08,54;UBERON:0008947,4.92e-07,38;UBERON:0003258,4.92e-07,38 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0.446961094427288,7.85104671690332,0,0,0.261185628199839,0,0,4.80571018686379,8.70431028153897,0.123766352960047,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0,0.454072282934794,8.64263886719998,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0.504641701751257,0,0,0,0,0,0,3.54920400119532,4.88895601226495,4.33819853790268,3.08823123650703,2.17879444092406,3.55905928666645,3.7752766284846,3.72820783738158,6.92544882503503,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,27.6737018749636,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,1.30303176000821,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,5.48243240895674,8.23544217146054,0,0,0,13.9438682865279,36.6157966923094,15.7242952531434,0,0.153461973288062,1.12264037773229,0.512556597022804,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,1.06337790121334,0.308097234229289,0.767518373630648,0.689182862422653,0.214840489736547,0.870100163485371,0.426133137080504,4.09547363974992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.88424136911809,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,12.6534576910976,9.79983446747707,27.0301417847324,0,0,0,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0.23056390438806,1.25660702173681,1.4124158349861,16.5880603060598,0.366390373607449,27.717808352969,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,0.067401132980677,22.4721741243661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.193978032976839,0,0.90392296312213,0,0,0,0,0,0,8.19219399286734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,27.8264466715665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,4.04339831526184,0,0,0,0.0752103283492573,0,0,7.07148075099841,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,5.76565406057152,0,0,0,0,0,0,0.235479278551542,0,1.12108865325516,6.39211104356647,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0.647428837187895,2.05325613712494,13.9177731760584,0,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.709036767709349,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,2.645134202577,0,0,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,3.33290204049236,0.0645889098360061,0.0620747142958579,0,0,1.41482032270754,0.870866991587845,20.5339980651169,0.471464371102113,0.286888821570705,5.32256570473621,0,0,0,0,4.69281884806909,0.366724332548599,2.44137706989443,0,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,0,0,0.446961094427288,7.85104671690332,0,0,0.261185628199839,0,0,4.80571018686379,8.70431028153897,0.123766352960047,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0,0.454072282934794,8.64263886719998,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0.504641701751257,0,0,0,0,0,0,3.54920400119532,4.88895601226495,4.33819853790268,3.08823123650703,2.17879444092406,3.55905928666645,3.7752766284846,3.72820783738158,6.92544882503503,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,27.6737018749636,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,1.30303176000821,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,5.48243240895674,8.23544217146054,0,0,0,13.9438682865279,36.6157966923094,15.7242952531434,0,0.153461973288062,1.12264037773229,0.512556597022804,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,1.06337790121334,0.308097234229289,0.767518373630648,0.689182862422653,0.214840489736547,0.870100163485371,0.426133137080504,4.09547363974992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,2.1396949401696,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.88424136911809,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,12.6534576910976,9.79983446747707,27.0301417847324,0,0,0,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0.23056390438806,1.25660702173681,1.4124158349861,16.5880603060598,0.366390373607449,27.717808352969,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,0.067401132980677,22.4721741243661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.193978032976839,0,0.90392296312213,0,0,0,0,0,0,8.19219399286734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,27.8264466715665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,4.04339831526184,0,0,0,0.0752103283492573,0,0,7.07148075099841,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,5.76565406057152,0,0,0,0,0,0,0.235479278551542,0,1.12108865325516,6.39211104356647,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0.647428837187895,2.05325613712494,13.9177731760584,0,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.709036767709349,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,2.645134202577,0,0,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,3.33290204049236,0.0645889098360061,0.0620747142958579,0,0,1.41482032270754,0.870866991587845,20.5339980651169,0.471464371102113,0.286888821570705,5.32256570473621,0,0,0,0,4.69281884806909,0.366724332548599,2.44137706989443,0,0,0 | ||
|short_description=p7@AF118081 | |short_description=p7@AF118081 | ||
}} | }} |
Latest revision as of 06:41, 17 September 2015
Short description: | p7@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -218bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.14e-25 | 19 |
placental epithelial cell | 4.95e-12 | 3 |
central nervous system pericyte | 3.49e-08 | 2 |
amniotic epithelial cell | 3.61e-08 | 2 |
amnion mesenchymal stem cell | 2.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.03e-30 | 14 |
membranous layer | 7.03e-30 | 14 |
larynx | 3.67e-29 | 9 |
extraembryonic structure | 1.16e-26 | 24 |
upper respiratory tract | 1.27e-19 | 19 |
chorion | 7.52e-19 | 7 |
placenta | 3.16e-15 | 4 |
allantois | 3.16e-15 | 4 |
amnion | 5.50e-13 | 7 |
somatic layer of lateral plate mesoderm | 2.58e-11 | 8 |
segment of respiratory tract | 2.27e-09 | 47 |
endoderm-derived structure | 6.98e-08 | 160 |
endoderm | 6.98e-08 | 160 |
presumptive endoderm | 6.98e-08 | 160 |
respiratory tract | 8.52e-08 | 54 |
respiratory primordium | 4.92e-07 | 38 |
endoderm of foregut | 4.92e-07 | 38 |