FFCP PHASE1:Hg19::chr5:176911104..176911116,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9260 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22958 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=357bp_to_ENST00000504380_5end | |||
|cluster_id=chr5:176911104..176911116,- | |||
|description=CAGE_peak_27_at_PDLIM7_5end | |||
|id=chr5:176911104..176911116,- | |||
|ontology_enrichment_celltype=CL:0000055!5.45e-10!180;CL:0000548!8.02e-09!679;CL:0000004!8.02e-09!679;CL:0000255!8.02e-09!679;CL:0000144!9.71e-09!625;CL:0000012!1.67e-08!682;CL:0002371!2.58e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0002601;9.82e-11;1!CL:0002581;2.38e-10;1!CL:0002681;2.17e-07;12!CL:0002584;2.17e-07;12!CL:0000197;4.32e-07;6!CL:0000098;4.32e-07;6!CL:0002167;4.32e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,9.84e-11,1;CL:0002581,2.08e-10,1;CL:0002681,2.22e-07,12;CL:0002584,2.22e-07,12;CL:0000197,3.55e-07,6;CL:0000098,3.55e-07,6;CL:0002167,3.55e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.82e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.82e-11;1!UBERON:0006868;9.82e-11;1!UBERON:0000353;6.49e-10;15!UBERON:0001225;2.17e-07;12!UBERON:0008987;2.17e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.08e-10,1;UBERON:0006868,1.08e-10,1;UBERON:0000353,6.74e-10,15;UBERON:0000080,9.86e-10,9;UBERON:0002120,9.86e-10,9;UBERON:0004875,9.86e-10,9;UBERON:0005721,9.86e-10,9;UBERON:0005754,9.86e-10,9;UBERON:0007297,9.86e-10,9;UBERON:0004876,4.73e-08,11;UBERON:0000058,7.05e-08,19;UBERON:0003887,2.03e-07,12;UBERON:0001225,2.22e-07,12;UBERON:0008987,2.22e-07,12;UBERON:0002417,9.85e-07,60;UBERON:0000916,9.85e-07,60 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,3.00219895059391,0,0.872338524100369,0,0.631719873426831,0,0,2.79120467188971,0.655324116390517,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0,0.398927315243264,0.426224750532694,0.290209238628584,1.13477044938228,0,0,0,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0.886917589850256,0.43917392846563,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0.805658634218294,0.760272105718513,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.300476117813194,0.340296549480063,0.179389635688862,0,0,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0.584622030967192,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.503760491138201,0.339121184620975,0.386521706326594,0,0,0,0,0.348581828608555,0.414644220061482,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,3.57656445851882,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0.24538298343828,1.00034104211935,0,1.87173775377726,4.81758269752337,0.630809660135739,0.35142424497814,0,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0.229628896329213,0.728364672026868,0.655622074797121,0.451199612907412,0.15403067420883,0,0,0.422206515571503,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,0,1.66215201785745,0,0,0,0,0,0,0,0.183138929636687,0,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,0,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0.190630193923825,0,0,0,1.56989728039846,0.359744915166629,0.54907405947211,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0.92947049429925,0,0,0.0982490410131212,0,2.12856638442359,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0.459446800413919,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.597743964753209,0,0,0.20453736500431,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.754703705257725,0,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| |||
|short_description=p27@PDLIM7 | |||
}} |
Latest revision as of 06:47, 17 September 2015
Short description: | p27@PDLIM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PDLIM7_5end |
Coexpression cluster: | NA |
Association with transcript: | 357bp_to_ENST00000504380_5end |
EntrezGene: | PDLIM7 |
HGNC: | 22958 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 9.84e-11 | 1 |
perirenal preadipocyte | 2.08e-10 | 1 |
kidney cortical cell | 2.22e-07 | 12 |
renal cortical epithelial cell | 2.22e-07 | 12 |
receptor cell | 3.55e-07 | 6 |
sensory epithelial cell | 3.55e-07 | 6 |
olfactory epithelial cell | 3.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.08e-10 | 1 |
seminal fluid secreting gland | 1.08e-10 | 1 |
parenchyma | 6.74e-10 | 15 |
mesonephros | 9.86e-10 | 9 |
pronephros | 9.86e-10 | 9 |
nephrogenic cord | 9.86e-10 | 9 |
pronephric mesoderm | 9.86e-10 | 9 |
rostral part of nephrogenic cord | 9.86e-10 | 9 |
presumptive pronephric mesoderm | 9.86e-10 | 9 |
urogenital ridge | 4.73e-08 | 11 |
duct | 7.05e-08 | 19 |
intraembryonic coelom | 2.03e-07 | 12 |
cortex of kidney | 2.22e-07 | 12 |
renal parenchyma | 2.22e-07 | 12 |
abdominal segment of trunk | 9.85e-07 | 60 |
abdomen | 9.85e-07 | 60 |