FFCP PHASE1:Hg19::chr11:2018399..2018408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000411861_5end | |association_with_transcript=38bp_to_ENST00000411861_5end | ||
|cluster_id=chr11:2018399..2018408,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_23_at_H19_5end | |description=CAGE_peak_23_at_H19_5end | ||
|id=chr11:2018399..2018408,- | |id=chr11:2018399..2018408,- | ||
|ontology_enrichment_celltype=CL:0000188!3.08e-08!9 | |ontology_enrichment_celltype=CL:0000188!3.08e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.24e-21;19!CL:0002577;3.76e-09;3!CL:0002541;1.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.31e-21,19;CL:0002577,3.81e-09,3;CL:0002541,1.73e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.83e-10;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.28e-15!14;UBERON:0000158!7.28e-15!14;UBERON:0001557!8.14e-14!19;UBERON:0001737!3.49e-13!9;UBERON:0000478!1.94e-11!24;UBERON:0003124!5.70e-11!7;UBERON:0003104!8.00e-10!238;UBERON:0009142!8.00e-10!238;UBERON:0000481!1.87e-07!347;UBERON:0000077!3.10e-07!130;UBERON:0001041!3.79e-07!98;UBERON:0001987!4.39e-07!4;UBERON:0004340!4.39e-07!4;UBERON:0004921!6.38e-07!129;UBERON:0004185!6.38e-07!129;UBERON:0002417!7.13e-07!61;UBERON:0000916!7.13e-07!61 | |ontology_enrichment_uberon=UBERON:0005631!7.28e-15!14;UBERON:0000158!7.28e-15!14;UBERON:0001557!8.14e-14!19;UBERON:0001737!3.49e-13!9;UBERON:0000478!1.94e-11!24;UBERON:0003124!5.70e-11!7;UBERON:0003104!8.00e-10!238;UBERON:0009142!8.00e-10!238;UBERON:0000481!1.87e-07!347;UBERON:0000077!3.10e-07!130;UBERON:0001041!3.79e-07!98;UBERON:0001987!4.39e-07!4;UBERON:0004340!4.39e-07!4;UBERON:0004921!6.38e-07!129;UBERON:0004185!6.38e-07!129;UBERON:0002417!7.13e-07!61;UBERON:0000916!7.13e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.49e-22;9!UBERON:0001557;6.49e-22;9!UBERON:0000478;1.19e-18;24!UBERON:0005631;2.20e-16;10!UBERON:0000158;2.20e-16;10!UBERON:0001987;3.00e-11;4!UBERON:0001134;1.14e-10;16!UBERON:0002036;1.14e-10;16!UBERON:0000305;6.81e-10;7!UBERON:0003124;1.51e-08;3!UBERON:0000920;1.51e-08;3!UBERON:0001723;2.96e-08;3!UBERON:0001033;2.96e-08;3!UBERON:0000072;9.81e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.41e-25,14;UBERON:0000158,1.41e-25,14;UBERON:0001737,6.93e-22,9;UBERON:0000478,1.24e-18,24;UBERON:0003124,5.20e-18,7;UBERON:0001557,6.47e-17,19;UBERON:0001987,3.17e-11,4;UBERON:0004340,3.17e-11,4;UBERON:0000305,6.76e-10,7;UBERON:0001041,6.36e-09,87;UBERON:0004119,1.29e-08,160;UBERON:0000925,1.29e-08,160;UBERON:0006595,1.29e-08,160;UBERON:0004871,1.37e-08,8;UBERON:0000920,1.73e-08,3;UBERON:0000072,1.75e-08,47;UBERON:0001723,2.23e-08,3;UBERON:0001033,2.23e-08,3;UBERON:0010056,2.23e-08,3;UBERON:0000065,6.08e-08,54;UBERON:0004921,7.64e-08,118;UBERON:0008947,7.40e-07,38;UBERON:0003258,7.40e-07,38 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,4.36169262050184,0,0,0,0,3.48900583986214,13.980247816331,14.7709507807934,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,2.43317435151318,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0,0.151357427644931,2.88087962239999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813357600086629,0.207322110030741,0,0,0,0,0,0,0,7.92655560266954,6.23763353288976,4.82022059766964,5.73528658208448,5.44698610231015,7.1181185733329,5.66291494272691,4.12065076763227,4.23221872641029,2.95262181849859,1.40241773803446,1.6462960453256,7.3504355692771,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,43.4097284313154,1.64648067356154,0,2.13235169245527,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0,0,0,0,0,0,5.17365356462525,0,0,0,12.5312740776154,23.6768962429491,0,0,0,13.9438682865279,58.252403828674,26.3079555196822,1.24053903909388,0,1.12264037773229,0.128139149255701,0,0.321707842287215,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,3.08454505380579,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,2.12675580242668,0.616194468458578,0.921022048356777,1.10269257987624,0.429680979473094,0.870100163485371,0.767039646744908,7.12256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,3.85145089230528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,31.7530164701128,21.38145701995,63.2751046324418,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,4.30836693166906,2.93347904189422,32.5381182926558,1.19076871422421,79.4221816267766,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,25.6824847135612,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,1.35588444468319,0,0,0,0,0,0,15.9847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0,1.88113722962834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.786818822024972,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0.879313402068495,10.6005511129777,0,0,0,0,0,1.41483874589699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.94084660514027,0,0.327628914576042,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,7.74021963207266,0,0,0,0.150420656698515,0,0,4.97622719514703,0,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,3.10458295569236,0,0.171488009437418,0,0,0,0,0.156986185701028,0,1.96190514319652,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,3.88457302312737,1.43727929598746,18.5570309014112,4.37139893753226,0,0,0,0,0,0,0,2.18559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0.902410431630081,0,0.357107877211315,0,0,0,0,0,0,0,0,6.34832208618481,1.11598505450025,0,5.62414530760926,0,0.218531143927391,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0,0,0,1.49263787330687,2.14257988317366,0.0645889098360061,0.248298857183432,0,0,2.22328907854041,1.95945073107265,19.8495314629463,0.202056159043763,0.143444410785353,5.65522606128223,0,0,0,0,0,0,2.84827324821017,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,4.36169262050184,0,0,0,0,3.48900583986214,13.980247816331,14.7709507807934,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,2.43317435151318,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0,0.151357427644931,2.88087962239999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813357600086629,0.207322110030741,0,0,0,0,0,0,0,7.92655560266954,6.23763353288976,4.82022059766964,5.73528658208448,5.44698610231015,7.1181185733329,5.66291494272691,4.12065076763227,4.23221872641029,2.95262181849859,1.40241773803446,1.6462960453256,7.3504355692771,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,43.4097284313154,1.64648067356154,0,2.13235169245527,0.791951872933429,0,0,0,0,0,0,0,0,0,2.17171960001369,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0,0,0,0,0,0,5.17365356462525,0,0,0,12.5312740776154,23.6768962429491,0,0,0,13.9438682865279,58.252403828674,26.3079555196822,1.24053903909388,0,1.12264037773229,0.128139149255701,0,0.321707842287215,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,3.08454505380579,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,2.12675580242668,0.616194468458578,0.921022048356777,1.10269257987624,0.429680979473094,0.870100163485371,0.767039646744908,7.12256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,3.85145089230528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,31.7530164701128,21.38145701995,63.2751046324418,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,4.30836693166906,2.93347904189422,32.5381182926558,1.19076871422421,79.4221816267766,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,25.6824847135612,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,1.35588444468319,0,0,0,0,0,0,15.9847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0,1.88113722962834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.786818822024972,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0.879313402068495,10.6005511129777,0,0,0,0,0,1.41483874589699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.94084660514027,0,0.327628914576042,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,7.74021963207266,0,0,0,0.150420656698515,0,0,4.97622719514703,0,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,3.10458295569236,0,0.171488009437418,0,0,0,0,0.156986185701028,0,1.96190514319652,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,3.88457302312737,1.43727929598746,18.5570309014112,4.37139893753226,0,0,0,0,0,0,0,2.18559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0.902410431630081,0,0.357107877211315,0,0,0,0,0,0,0,0,6.34832208618481,1.11598505450025,0,5.62414530760926,0,0.218531143927391,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0,0,0,1.49263787330687,2.14257988317366,0.0645889098360061,0.248298857183432,0,0,2.22328907854041,1.95945073107265,19.8495314629463,0.202056159043763,0.143444410785353,5.65522606128223,0,0,0,0,0,0,2.84827324821017,0,0,0 | ||
|short_description=p23@H19 | |short_description=p23@H19 | ||
}} | }} |
Latest revision as of 06:49, 17 September 2015
Short description: | p23@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 38bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.31e-21 | 19 |
placental epithelial cell | 3.81e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.73e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.41e-25 | 14 |
membranous layer | 1.41e-25 | 14 |
larynx | 6.93e-22 | 9 |
extraembryonic structure | 1.24e-18 | 24 |
chorion | 5.20e-18 | 7 |
upper respiratory tract | 6.47e-17 | 19 |
placenta | 3.17e-11 | 4 |
allantois | 3.17e-11 | 4 |
amnion | 6.76e-10 | 7 |
foregut | 6.36e-09 | 87 |
endoderm-derived structure | 1.29e-08 | 160 |
endoderm | 1.29e-08 | 160 |
presumptive endoderm | 1.29e-08 | 160 |
somatic layer of lateral plate mesoderm | 1.37e-08 | 8 |
egg chorion | 1.73e-08 | 3 |
segment of respiratory tract | 1.75e-08 | 47 |
tongue | 2.23e-08 | 3 |
gustatory system | 2.23e-08 | 3 |
future tongue | 2.23e-08 | 3 |
respiratory tract | 6.08e-08 | 54 |
subdivision of digestive tract | 7.64e-08 | 118 |
respiratory primordium | 7.40e-07 | 38 |
endoderm of foregut | 7.40e-07 | 38 |