FFCP PHASE1:Hg19::chr1:27240361..27240377,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8431 | |EntrezGene=8431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7961 | |HGNC=7961 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8P5 | |UniProt=F1D8P5 | ||
|association_with_transcript=53bp_to_HQ692833_5end | |association_with_transcript=53bp_to_HQ692833_5end | ||
|cluster_id=chr1:27240361..27240377,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_2_at_NR0B2_5end | |description=CAGE_peak_2_at_NR0B2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!5.17e-08!12;CL:0000417!5.17e-08!12;CL:0000668!5.17e-08!12;CL:0000414!5.17e-08!12;CL:0000412!5.17e-08!12;CL:0000182!5.17e-08!12 | |ontology_enrichment_celltype=CL:0000181!5.17e-08!12;CL:0000417!5.17e-08!12;CL:0000668!5.17e-08!12;CL:0000414!5.17e-08!12;CL:0000412!5.17e-08!12;CL:0000182!5.17e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-07;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.74e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.49e-13;1!UBERON:0010226;8.15e-13;1!UBERON:0006242;8.15e-13;1 | |ontology_enrichment_development_v019=UBERON:0000358;4.49e-13;1!UBERON:0010226;8.15e-13;1!UBERON:0006242;8.15e-13;1 | ||
|ontology_enrichment_disease=DOID:114!2.11e-09!2 | |ontology_enrichment_disease=DOID:114!2.11e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.37e-24;2!DOID:178;4.49e-13;1!DOID:326;4.49e-13;1!DOID:3978;4.49e-13;1!DOID:3394;4.49e-13;1!DOID:5844;4.49e-13;1!DOID:1287;8.41e-13;4!DOID:3119;3.14e-08;14!DOID:3493;4.83e-07;2 | |ontology_enrichment_disease_v019=DOID:114;1.37e-24;2!DOID:178;4.49e-13;1!DOID:326;4.49e-13;1!DOID:3978;4.49e-13;1!DOID:3394;4.49e-13;1!DOID:5844;4.49e-13;1!DOID:1287;8.41e-13;4!DOID:3119;3.14e-08;14!DOID:3493;4.83e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.45e-24,2;DOID:178,5.38e-13,1;DOID:326,5.38e-13,1;DOID:3978,5.38e-13,1;DOID:3394,5.38e-13,1;DOID:5844,5.38e-13,1;DOID:1287,8.67e-13,4;DOID:3119,3.34e-08,14;DOID:3493,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-16!115;UBERON:0005057!1.56e-10!26;UBERON:0002107!2.44e-09!19;UBERON:0006925!2.44e-09!19;UBERON:0008836!2.44e-09!19;UBERON:0005172!6.08e-09!55;UBERON:0005173!6.08e-09!55;UBERON:0009497!6.31e-09!25;UBERON:0000015!6.31e-09!25;UBERON:0002423!6.31e-09!25;UBERON:0006235!6.31e-09!25;UBERON:0004161!6.31e-09!25;UBERON:0005177!2.13e-08!107;UBERON:0007100!3.45e-08!27;UBERON:0004921!4.53e-08!129;UBERON:0004185!4.53e-08!129;UBERON:0008835!6.32e-08!22;UBERON:0003894!6.32e-08!22;UBERON:0002417!8.50e-08!61;UBERON:0000916!8.50e-08!61;UBERON:0009854!1.55e-07!23;UBERON:0001041!2.09e-07!98;UBERON:0007499!7.46e-07!25;UBERON:0001007!9.21e-07!155;UBERON:0001555!9.21e-07!155;UBERON:0007026!9.21e-07!155;UBERON:0009569!9.89e-07!113 | |ontology_enrichment_uberon=UBERON:0007023!5.85e-16!115;UBERON:0005057!1.56e-10!26;UBERON:0002107!2.44e-09!19;UBERON:0006925!2.44e-09!19;UBERON:0008836!2.44e-09!19;UBERON:0005172!6.08e-09!55;UBERON:0005173!6.08e-09!55;UBERON:0009497!6.31e-09!25;UBERON:0000015!6.31e-09!25;UBERON:0002423!6.31e-09!25;UBERON:0006235!6.31e-09!25;UBERON:0004161!6.31e-09!25;UBERON:0005177!2.13e-08!107;UBERON:0007100!3.45e-08!27;UBERON:0004921!4.53e-08!129;UBERON:0004185!4.53e-08!129;UBERON:0008835!6.32e-08!22;UBERON:0003894!6.32e-08!22;UBERON:0002417!8.50e-08!61;UBERON:0000916!8.50e-08!61;UBERON:0009854!1.55e-07!23;UBERON:0001041!2.09e-07!98;UBERON:0007499!7.46e-07!25;UBERON:0001007!9.21e-07!155;UBERON:0001555!9.21e-07!155;UBERON:0007026!9.21e-07!155;UBERON:0009569!9.89e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;8.15e-13;1!UBERON:0002082;8.15e-13;1!UBERON:0002108;3.93e-10;4!UBERON:0007100;9.76e-08;25!UBERON:0006955;2.74e-07;2!UBERON:0004801;2.74e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002084;8.15e-13;1!UBERON:0002082;8.15e-13;1!UBERON:0002108;3.93e-10;4!UBERON:0007100;9.76e-08;25!UBERON:0006955;2.74e-07;2!UBERON:0004801;2.74e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,6.82e-13,1;UBERON:0002082,6.82e-13,1;UBERON:0010226,6.82e-13,1;UBERON:0002108,4.12e-10,4;UBERON:0006955,3.09e-07,2;UBERON:0004801,3.09e-07,2;UBERON:0007100,3.41e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,1.00863292007874,0,4.11827994868715,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,2.1964690054889,3.43380838509257,2.67805748930247,0.403100834920358,0,0,0.551482276150566,0.494495150286999,0.539228350833479,0.295282444544246,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34109717480496,0.647428837187895,0.718639647993729,0,0.485710993059139,0.233939463462106,0,0,0,0,3.32118255846682,1.15761237161917,0.218559560503957,10.817297816315,0,0.235676547101626,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,1.00863292007874,0,4.11827994868715,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,2.1964690054889,3.43380838509257,2.67805748930247,0.403100834920358,0,0,0.551482276150566,0.494495150286999,0.539228350833479,0.295282444544246,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34109717480496,0.647428837187895,0.718639647993729,0,0.485710993059139,0.233939463462106,0,0,0,0,3.32118255846682,1.15761237161917,0.218559560503957,10.817297816315,0,0.235676547101626,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p2@NR0B2 | |short_description=p2@NR0B2 | ||
}} | }} |
Latest revision as of 06:53, 17 September 2015
Short description: | p2@NR0B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR0B2_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 53bp_to_HQ692833_5end |
EntrezGene: | NR0B2 |
HGNC: | 7961 |
UniProt: | F1D8P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 6.82e-13 | 1 |
cardiac ventricle | 6.82e-13 | 1 |
future cardiac ventricle | 6.82e-13 | 1 |
small intestine | 4.12e-10 | 4 |
uterine epithelium | 3.09e-07 | 2 |
cervix epithelium | 3.09e-07 | 2 |
primary circulatory organ | 3.41e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.45e-24 | 2 |
vascular disease | 5.38e-13 | 1 |
ischemia | 5.38e-13 | 1 |
extrinsic cardiomyopathy | 5.38e-13 | 1 |
myocardial ischemia | 5.38e-13 | 1 |
myocardial infarction | 5.38e-13 | 1 |
cardiovascular system disease | 8.67e-13 | 4 |
gastrointestinal system cancer | 3.34e-08 | 14 |
signet ring cell adenocarcinoma | 4.17e-07 | 2 |