FFCP PHASE1:Hg19::chr16:62070305..62070310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1006 | |EntrezGene=1006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1767 | |HGNC=1767 | ||
|TSSclassifier=strong | |||
|UniProt=P55286 | |UniProt=P55286 | ||
|association_with_transcript=-269bp_to_uc002eog.1_5end | |association_with_transcript=-269bp_to_uc002eog.1_5end | ||
|cluster_id=chr16:62070305..62070310,- | |||
|coexpression_cluster_id=C3579 | |coexpression_cluster_id=C3579 | ||
|description=CAGE_peak_4_at_CDH8_5end | |description=CAGE_peak_4_at_CDH8_5end | ||
|id=chr16:62070305..62070310,- | |id=chr16:62070305..62070310,- | ||
|ontology_enrichment_celltype=CL:0000064!2.88e-07!3;CL:0005012!2.88e-07!3;CL:0000067!2.88e-07!3;CL:0002304!2.88e-07!3 | |ontology_enrichment_celltype=CL:0000064!2.88e-07!3;CL:0005012!2.88e-07!3;CL:0000067!2.88e-07!3;CL:0002304!2.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.03e-17;1!CL:0000054;1.57e-09;2!CL:0000137;1.57e-09;2!CL:0000092;1.57e-09;2!CL:0000064;9.11e-07;3!CL:0000067;9.11e-07;3!CL:0005012;9.11e-07;3!CL:0002304;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.71e-09,2;CL:0000137,1.71e-09,2;CL:0000092,1.71e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.69e-07!10 | |ontology_enrichment_disease=DOID:171!3.69e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2513;3.74e-18;1!DOID:171;1.06e-15;10!DOID:3451;9.46e-10;2!DOID:4159;9.46e-10;2!DOID:0060122;9.46e-10;2!DOID:200;1.57e-09;2!DOID:3193;1.57e-09;2!DOID:4305;1.57e-09;2!DOID:962;1.57e-09;2!DOID:3095;1.85e-07;22!DOID:2994;1.85e-07;22!DOID:1192;9.11e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.75e-18,1;DOID:171,1.23e-15,10;DOID:3451,9.46e-10,2;DOID:4159,9.46e-10,2;DOID:0060122,9.46e-10,2;DOID:200,1.71e-09,2;DOID:4305,1.71e-09,2;DOID:3193,2.02e-09,2;DOID:962,2.02e-09,2;DOID:3095,1.98e-07,22;DOID:2994,1.98e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!9.36e-36!90;UBERON:0001049!5.57e-33!57;UBERON:0005068!5.57e-33!57;UBERON:0006241!5.57e-33!57;UBERON:0007135!5.57e-33!57;UBERON:0003075!2.19e-30!86;UBERON:0007284!2.19e-30!86;UBERON:0002020!3.14e-30!34;UBERON:0003528!3.14e-30!34;UBERON:0001893!5.03e-30!34;UBERON:0001869!1.53e-29!32;UBERON:0002791!1.17e-28!33;UBERON:0002780!4.10e-28!41;UBERON:0001890!4.10e-28!41;UBERON:0006240!4.10e-28!41;UBERON:0002616!2.33e-27!59;UBERON:0003080!2.92e-27!42;UBERON:0001017!5.42e-27!82;UBERON:0005743!1.35e-26!86;UBERON:0003056!2.36e-26!61;UBERON:0000073!4.53e-26!94;UBERON:0001016!4.53e-26!94;UBERON:0000955!3.21e-23!69;UBERON:0006238!3.21e-23!69;UBERON:0000956!2.67e-21!25;UBERON:0000203!2.67e-21!25;UBERON:0002619!1.48e-19!22;UBERON:0000924!2.99e-19!173;UBERON:0006601!2.99e-19!173;UBERON:0000033!3.27e-17!123;UBERON:0000153!6.19e-17!129;UBERON:0007811!6.19e-17!129;UBERON:0001950!1.53e-16!20;UBERON:0004121!5.92e-16!169;UBERON:0007023!2.26e-12!115;UBERON:0002420!1.87e-10!9;UBERON:0007245!1.87e-10!9;UBERON:0010009!1.87e-10!9;UBERON:0010011!1.87e-10!9;UBERON:0000454!1.87e-10!9;UBERON:0002308!2.04e-10!9;UBERON:0000125!2.04e-10!9;UBERON:0000349!3.10e-10!5;UBERON:0000025!3.66e-10!194;UBERON:0000369!4.12e-09!4;UBERON:0002435!4.12e-09!4;UBERON:0000204!4.12e-09!4;UBERON:0010082!4.12e-09!4;UBERON:0001871!1.13e-07!7;UBERON:0005383!2.39e-07!3;UBERON:0005382!2.39e-07!3;UBERON:0001778!2.88e-07!3;UBERON:0001775!2.88e-07!3;UBERON:0009663!2.95e-07!7;UBERON:0003076!4.40e-07!15;UBERON:0003057!4.40e-07!15;UBERON:0004111!5.69e-07!241 | |ontology_enrichment_uberon=UBERON:0002346!9.36e-36!90;UBERON:0001049!5.57e-33!57;UBERON:0005068!5.57e-33!57;UBERON:0006241!5.57e-33!57;UBERON:0007135!5.57e-33!57;UBERON:0003075!2.19e-30!86;UBERON:0007284!2.19e-30!86;UBERON:0002020!3.14e-30!34;UBERON:0003528!3.14e-30!34;UBERON:0001893!5.03e-30!34;UBERON:0001869!1.53e-29!32;UBERON:0002791!1.17e-28!33;UBERON:0002780!4.10e-28!41;UBERON:0001890!4.10e-28!41;UBERON:0006240!4.10e-28!41;UBERON:0002616!2.33e-27!59;UBERON:0003080!2.92e-27!42;UBERON:0001017!5.42e-27!82;UBERON:0005743!1.35e-26!86;UBERON:0003056!2.36e-26!61;UBERON:0000073!4.53e-26!94;UBERON:0001016!4.53e-26!94;UBERON:0000955!3.21e-23!69;UBERON:0006238!3.21e-23!69;UBERON:0000956!2.67e-21!25;UBERON:0000203!2.67e-21!25;UBERON:0002619!1.48e-19!22;UBERON:0000924!2.99e-19!173;UBERON:0006601!2.99e-19!173;UBERON:0000033!3.27e-17!123;UBERON:0000153!6.19e-17!129;UBERON:0007811!6.19e-17!129;UBERON:0001950!1.53e-16!20;UBERON:0004121!5.92e-16!169;UBERON:0007023!2.26e-12!115;UBERON:0002420!1.87e-10!9;UBERON:0007245!1.87e-10!9;UBERON:0010009!1.87e-10!9;UBERON:0010011!1.87e-10!9;UBERON:0000454!1.87e-10!9;UBERON:0002308!2.04e-10!9;UBERON:0000125!2.04e-10!9;UBERON:0000349!3.10e-10!5;UBERON:0000025!3.66e-10!194;UBERON:0000369!4.12e-09!4;UBERON:0002435!4.12e-09!4;UBERON:0000204!4.12e-09!4;UBERON:0010082!4.12e-09!4;UBERON:0001871!1.13e-07!7;UBERON:0005383!2.39e-07!3;UBERON:0005382!2.39e-07!3;UBERON:0001778!2.88e-07!3;UBERON:0001775!2.88e-07!3;UBERON:0009663!2.95e-07!7;UBERON:0003076!4.40e-07!15;UBERON:0003057!4.40e-07!15;UBERON:0004111!5.69e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.78e-18;4!UBERON:0000923;6.78e-18;4!UBERON:0010316;6.78e-18;4!UBERON:0005291;6.78e-18;4!UBERON:0002050;1.61e-14;5!UBERON:0005423;1.61e-14;5!UBERON:0003714;1.57e-09;2!UBERON:0001778;9.11e-07;3!UBERON:0001775;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.02e-09,2 | |||
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| ||
|short_description=p4@CDH8 | |short_description=p4@CDH8 | ||
}} | }} |
Latest revision as of 07:20, 17 September 2015
Short description: | p4@CDH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH8_5end |
Coexpression cluster: | C3579_neuroectodermal_basal_amygdala_putamen_mesodermal_caudate_brain |
Association with transcript: | -269bp_to_uc002eog.1_5end |
EntrezGene: | CDH8 |
HGNC: | 1767 |
UniProt: | P55286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.71e-09 | 2 |
osteocyte | 1.71e-09 | 2 |
osteoclast | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.75e-18 | 1 |
neuroectodermal tumor | 1.23e-15 | 10 |
skin carcinoma | 9.46e-10 | 2 |
skin cancer | 9.46e-10 | 2 |
integumentary system cancer | 9.46e-10 | 2 |
giant cell tumor | 1.71e-09 | 2 |
bone giant cell tumor | 1.71e-09 | 2 |
peripheral nerve sheath neoplasm | 2.02e-09 | 2 |
neurofibroma | 2.02e-09 | 2 |
germ cell and embryonal cancer | 1.98e-07 | 22 |
germ cell cancer | 1.98e-07 | 22 |