FFCP PHASE1:Hg19::chr2:145274038..145274052,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:145274038..145274052,- to FFCP PHASE1:Hg19::chr2:145274038..145274052,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9839 | |EntrezGene=9839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14881 | |HGNC=14881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=275bp_to_ENST00000479735_5end | |||
|cluster_id=chr2:145274038..145274052,- | |||
|coexpression_cluster_id=C192 | |||
|description=CAGE_peak_31_at_ZEB2_5end | |||
|id=chr2:145274038..145274052,- | |||
|ontology_enrichment_celltype=CL:0000839!3.89e-34!70;CL:0002057!1.58e-33!42;CL:0000766!1.75e-33!76;CL:0000860!2.04e-33!45;CL:0000557!6.67e-32!71;CL:0002194!4.88e-30!63;CL:0000576!4.88e-30!63;CL:0000040!4.88e-30!63;CL:0000559!4.88e-30!63;CL:0002009!1.40e-28!65;CL:0000763!6.81e-28!112;CL:0000049!6.81e-28!112;CL:0000738!2.87e-22!140;CL:0000037!7.60e-22!172;CL:0000566!7.60e-22!172;CL:0002031!2.43e-21!124;CL:0002032!6.28e-21!165;CL:0000837!6.28e-21!165;CL:0002087!1.56e-20!119;CL:0000988!5.62e-20!182;CL:0002393!7.17e-10!9;CL:0002397!7.17e-10!9;CL:0000134!2.49e-09!358;CL:0002320!1.26e-08!365;CL:0000219!3.14e-07!390;CL:0000048!7.00e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-41;33!CL:0002057;1.04e-41;33!CL:0000473;4.62e-34;39!CL:0000234;4.62e-34;39!CL:0000576;9.13e-30;48!CL:0000766;1.06e-21;69!CL:0002393;1.46e-10;6!CL:0002397;1.46e-10;6!CL:0000738;7.21e-10;136!CL:0002087;9.39e-10;104!CL:0000775;9.52e-10;3!CL:0000763;1.17e-09;100!CL:0000623;2.48e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.31e-56,42;CL:0002057,4.31e-56,42;CL:0000473,1.34e-53,48;CL:0000234,1.34e-53,48;CL:0002194,4.86e-42,59;CL:0000576,4.86e-42,59;CL:0000040,4.86e-42,59;CL:0000559,4.86e-42,59;CL:0000766,2.85e-41,72;CL:0002009,1.51e-40,61;CL:0000839,3.31e-37,66;CL:0000557,1.35e-36,67;CL:0002087,3.62e-29,115;CL:0000738,1.15e-28,136;CL:0000763,3.91e-26,108;CL:0000049,3.91e-26,108;CL:0002031,2.62e-25,120;CL:0000037,2.83e-22,168;CL:0002032,1.83e-21,161;CL:0000837,1.83e-21,161;CL:0000988,6.86e-21,177;CL:0002393,8.99e-12,9;CL:0002397,8.99e-12,9;CL:0000775,8.75e-10,3;CL:0000623,1.89e-09,3;CL:0000825,1.89e-09,3;CL:0000134,9.74e-09,354;CL:0002320,1.83e-08,361;CL:0000219,1.69e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-40;42!CL:0000049;7.87e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.68e-35!102;UBERON:0003061!3.68e-35!102;UBERON:0002193!5.05e-31!112;UBERON:0002371!1.26e-28!80;UBERON:0001474!1.20e-27!86;UBERON:0004765!7.47e-27!101;UBERON:0001434!7.47e-27!101;UBERON:0002405!5.19e-18!115;UBERON:0002204!1.12e-13!167;UBERON:0003081!1.09e-10!216;UBERON:0002384!2.26e-08!375;UBERON:0000178!4.03e-08!15;UBERON:0000179!4.03e-08!15;UBERON:0000463!4.03e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.99e-32,76;UBERON:0001474,3.24e-29,82;UBERON:0002390,4.83e-29,98;UBERON:0003061,4.83e-29,98;UBERON:0004765,2.84e-26,90;UBERON:0002193,5.87e-26,108;UBERON:0002405,2.68e-25,93;UBERON:0001434,3.00e-23,100;UBERON:0003081,5.42e-13,203;UBERON:0002204,2.85e-12,167;UBERON:0002384,4.32e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87796785972314,9.22504458362652,5.859293509328,0.223915474239924,0,0,1.59938062657521,0.377875943688809,0.727752183563449,3.0215774797739,3.70051099219643,1.23882548358041,2.58923153089935,0.512321413058201,0.47296445977717,1.03423704220986,0,1.35426486594342,1.69418105588344,0.545812300115692,0.449446968890169,3.36692281607993,0,1.91801137739712,0.989553900560148,0.398927315243264,0,3.19230162491442,1.70215567407342,1.24564449799115,2.76373531782418,3.65038042894141,0.868755378820466,1.21079900526674,0,0.632924774881769,0.422510572623884,0.212604299965044,0.419317291016752,0.673971786878971,0.450530678524519,0,1.14005097496499,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.87208137048455,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.288239906833923,0.75745460055828,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,1.94064817373566,2.05348858047597,0,0,0.773288812777695,0,0.637938751653163,2.99602809578873,11.966458368161,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,2.5885704098234,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0.27470839445503,0,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0.684704037099577,0.156679895773023,0,0,0.481764225311099,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.545545977607678,0.644463342254931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.126831620387814,1.64092442705466,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0.109940516745429,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87796785972314,9.22504458362652,5.859293509328,0.223915474239924,0,0,1.59938062657521,0.377875943688809,0.727752183563449,3.0215774797739,3.70051099219643,1.23882548358041,2.58923153089935,0.512321413058201,0.47296445977717,1.03423704220986,0,1.35426486594342,1.69418105588344,0.545812300115692,0.449446968890169,3.36692281607993,0,1.91801137739712,0.989553900560148,0.398927315243264,0,3.19230162491442,1.70215567407342,1.24564449799115,2.76373531782418,3.65038042894141,0.868755378820466,1.21079900526674,0,0.632924774881769,0.422510572623884,0.212604299965044,0.419317291016752,0.673971786878971,0.450530678524519,0,1.14005097496499,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.87208137048455,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.288239906833923,0.75745460055828,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,1.94064817373566,2.05348858047597,0,0,0.773288812777695,0,0.637938751653163,2.99602809578873,11.966458368161,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,2.5885704098234,0.853820462427555,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0.27470839445503,0,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0.684704037099577,0.156679895773023,0,0,0.481764225311099,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.545545977607678,0.644463342254931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.126831620387814,1.64092442705466,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0.109940516745429,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p31@ZEB2 | |||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p31@ZEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_ZEB2_5end |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | 275bp_to_ENST00000479735_5end |
EntrezGene: | ZEB2 |
HGNC: | 14881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.31e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.31e-56 | 42 |
defensive cell | 1.34e-53 | 48 |
phagocyte | 1.34e-53 | 48 |
monopoietic cell | 4.86e-42 | 59 |
monocyte | 4.86e-42 | 59 |
monoblast | 4.86e-42 | 59 |
promonocyte | 4.86e-42 | 59 |
myeloid leukocyte | 2.85e-41 | 72 |
macrophage dendritic cell progenitor | 1.51e-40 | 61 |
myeloid lineage restricted progenitor cell | 3.31e-37 | 66 |
granulocyte monocyte progenitor cell | 1.35e-36 | 67 |
nongranular leukocyte | 3.62e-29 | 115 |
leukocyte | 1.15e-28 | 136 |
myeloid cell | 3.91e-26 | 108 |
common myeloid progenitor | 3.91e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 2.62e-25 | 120 |
hematopoietic stem cell | 2.83e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.83e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-21 | 161 |
hematopoietic cell | 6.86e-21 | 177 |
intermediate monocyte | 8.99e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.99e-12 | 9 |
neutrophil | 8.75e-10 | 3 |
natural killer cell | 1.89e-09 | 3 |
pro-NK cell | 1.89e-09 | 3 |
mesenchymal cell | 9.74e-09 | 354 |
connective tissue cell | 1.83e-08 | 361 |
motile cell | 1.69e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.99e-32 | 76 |
bone element | 3.24e-29 | 82 |
hematopoietic system | 4.83e-29 | 98 |
blood island | 4.83e-29 | 98 |
skeletal element | 2.84e-26 | 90 |
hemolymphoid system | 5.87e-26 | 108 |
immune system | 2.68e-25 | 93 |
skeletal system | 3.00e-23 | 100 |
lateral plate mesoderm | 5.42e-13 | 203 |
musculoskeletal system | 2.85e-12 | 167 |
connective tissue | 4.32e-08 | 371 |