FFCP PHASE1:Hg19::chr16:65610198..65610205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283867 | |EntrezGene=283867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_027755,uc002eol.1_5end | |||
|cluster_id=chr16:65610198..65610205,- | |||
|description=CAGE_peak_1_at_LOC283867_5end | |||
|id=chr16:65610198..65610205,- | |||
|ontology_enrichment_celltype=CL:0000946!1.84e-08!1;CL:0000786!1.84e-08!1;CL:0000980!1.84e-08!1;CL:0000313!2.84e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.95e-13;6!CL:0002255;2.95e-13;6!CL:0000054;1.89e-10;2!CL:0000137;1.89e-10;2!CL:0000092;1.89e-10;2!CL:0002092;3.20e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.95e-13,6;CL:0002255,2.95e-13,6;CL:0000054,1.89e-10,2;CL:0000137,1.89e-10,2;CL:0000092,1.89e-10,2;CL:0002092,3.25e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.09e-15;5!UBERON:0005795;2.53e-08;10 | |||
|ontology_enrichment_disease=DOID:0060085!7.01e-09!1;DOID:3165!7.01e-09!1;DOID:0060121!7.01e-09!1;DOID:2438!7.01e-09!1;DOID:4418!7.01e-09!1;DOID:4960!8.15e-09!1;DOID:0070004!8.15e-09!1;DOID:5662!1.02e-08!1;DOID:162!2.21e-08!235;DOID:2152!2.84e-08!1;DOID:2355!3.79e-08!1;DOID:14566!3.96e-08!239;DOID:305!1.16e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.56e-19;1!DOID:3165;1.56e-19;1!DOID:0060121;1.56e-19;1!DOID:2438;1.56e-19;1!DOID:4418;1.56e-19;1!DOID:4960;2.06e-19;1!DOID:0070004;2.06e-19;1!DOID:5662;4.28e-19;1!DOID:3001;2.95e-13;6!DOID:200;1.89e-10;2!DOID:4305;1.89e-10;2!DOID:7;1.92e-07;39!DOID:299;3.31e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.56e-19,1;DOID:3165,1.56e-19,1;DOID:0060121,1.56e-19,1;DOID:2438,1.56e-19,1;DOID:4418,1.56e-19,1;DOID:4960,2.25e-19,1;DOID:0070004,2.25e-19,1;DOID:5662,3.91e-19,1;DOID:3001,2.95e-13,6;DOID:200,1.89e-10,2;DOID:4305,1.89e-10,2;DOID:305,4.92e-08,106;DOID:7,9.48e-08,39;DOID:299,3.28e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.31e-08!8;UBERON:0004911!2.84e-08!1;UBERON:0002046!7.28e-07!5;UBERON:0004117!7.28e-07!5;UBERON:0007689!7.28e-07!5;UBERON:0007123!7.28e-07!5;UBERON:0003091!7.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.09e-15;5!UBERON:0002371;5.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.17e-15,5;UBERON:0004117,2.17e-15,5;UBERON:0007689,2.17e-15,5;UBERON:0007123,2.17e-15,5;UBERON:0003091,2.17e-15,5;UBERON:0009722,1.67e-07,11;UBERON:0007690,1.67e-07,11 | |||
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|short_description=p1@LOC283867 | |||
}} | }} |
Latest revision as of 08:01, 17 September 2015
Short description: | p1@LOC283867 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283867_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_027755, uc002eol.1_5end |
EntrezGene: | LOC283867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.95e-13 | 6 |
stromal cell of endometrium | 2.95e-13 | 6 |
bone matrix secreting cell | 1.89e-10 | 2 |
osteocyte | 1.89e-10 | 2 |
osteoclast | 1.89e-10 | 2 |
bone marrow cell | 3.25e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.17e-15 | 5 |
pharyngeal pouch | 2.17e-15 | 5 |
thyroid diverticulum | 2.17e-15 | 5 |
pharyngeal pouch 2 | 2.17e-15 | 5 |
thyroid primordium | 2.17e-15 | 5 |
entire pharyngeal arch endoderm | 1.67e-07 | 11 |
early pharyngeal endoderm | 1.67e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.56e-19 | 1 |
skin benign neoplasm | 1.56e-19 | 1 |
integumentary system benign neoplasm | 1.56e-19 | 1 |
dermis tumor | 1.56e-19 | 1 |
cutaneous fibrous histiocytoma | 1.56e-19 | 1 |
bone marrow cancer | 2.25e-19 | 1 |
myeloma | 2.25e-19 | 1 |
pleomorphic carcinoma | 3.91e-19 | 1 |
female reproductive endometrioid cancer | 2.95e-13 | 6 |
giant cell tumor | 1.89e-10 | 2 |
bone giant cell tumor | 1.89e-10 | 2 |
carcinoma | 4.92e-08 | 106 |
disease of anatomical entity | 9.48e-08 | 39 |
adenocarcinoma | 3.28e-07 | 25 |