FFCP PHASE1:Hg19::chr12:13061894..13061915,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:13061894..13061915,+ to FFCP PHASE1:Hg19::chr12:13061894..13061915,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9052 | |EntrezGene=9052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9836 | |HGNC=9836 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_ENST00000540125_5end | |||
|cluster_id=chr12:13061894..13061915,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_2_at_GPRC5A_5end | |||
|id=chr12:13061894..13061915,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.99e-31!254;CL:0000077!2.69e-09!19;CL:0000076!1.08e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.84e-13;19!CL:1000497;8.51e-09;17!CL:0002518;8.51e-09;17!CL:1000507;2.97e-08;10!CL:1000494;2.97e-08;10!CL:0002681;4.62e-07;12!CL:0002584;4.62e-07;12!CL:1000449;8.14e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.50e-30,253;CL:0000077,7.04e-13,19;CL:1000497,9.30e-09,17;CL:0002518,9.30e-09,17;CL:1000507,3.43e-08,10;CL:1000494,3.43e-08,10;CL:0002076,4.34e-08,42;CL:0000076,1.69e-07,63;CL:0002681,5.55e-07,12;CL:0002584,5.55e-07,12;CL:0000223,5.81e-07,58;CL:1000449,9.05e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.30e-10;29 | |||
|ontology_enrichment_disease=DOID:305!8.15e-21!106;DOID:0050687!1.81e-14!143;DOID:14566!3.11e-08!239;DOID:299!5.07e-08!25;DOID:162!2.37e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:305;1.90e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.28e-22,106;DOID:0050687,4.94e-15,143;DOID:14566,4.04e-12,239;DOID:162,1.32e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.47e-16!169;UBERON:0000925!3.47e-16!169;UBERON:0006595!3.47e-16!169;UBERON:0001007!2.85e-14!155;UBERON:0001555!2.85e-14!155;UBERON:0007026!2.85e-14!155;UBERON:0004921!4.84e-12!129;UBERON:0004185!4.84e-12!129;UBERON:0000077!2.44e-10!130;UBERON:0001008!4.11e-10!45;UBERON:0003064!9.09e-10!37;UBERON:0006554!9.50e-10!44;UBERON:0000162!6.08e-09!14;UBERON:0001353!6.08e-09!14;UBERON:0000163!6.08e-09!14;UBERON:0006866!6.08e-09!14;UBERON:0000164!6.08e-09!14;UBERON:0000931!6.08e-09!14;UBERON:0003104!7.32e-09!238;UBERON:0009142!7.32e-09!238;UBERON:0005911!1.14e-08!82;UBERON:0008947!1.34e-08!38;UBERON:0003258!1.34e-08!38;UBERON:0002367!1.43e-08!11;UBERON:0010147!1.43e-08!11;UBERON:0009846!1.43e-08!11;UBERON:0003353!1.43e-08!11;UBERON:0004902!1.43e-08!11;UBERON:0003820!1.43e-08!11;UBERON:0009847!1.43e-08!11;UBERON:0005156!2.18e-08!59;UBERON:0000990!2.18e-08!59;UBERON:0001737!2.30e-08!9;UBERON:0004122!5.31e-08!15;UBERON:0000065!1.17e-07!53;UBERON:0005153!1.18e-07!37;UBERON:0003937!1.68e-07!12;UBERON:0005399!1.68e-07!12;UBERON:0001046!4.41e-07!19;UBERON:0002100!5.38e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.28e-16;9!UBERON:0001557;9.28e-16;9!UBERON:0002367;4.30e-10;11!UBERON:0010147;4.30e-10;11!UBERON:0003937;4.15e-09;12!UBERON:0005399;4.15e-09;12!UBERON:0004211;2.97e-08;10!UBERON:0009773;2.97e-08;10!UBERON:0001231;2.97e-08;10!UBERON:0004810;2.97e-08;10!UBERON:0000065;3.39e-07;44!UBERON:0001225;4.62e-07;12!UBERON:0008987;4.62e-07;12!UBERON:0006555;8.14e-07;15!UBERON:0000353;8.14e-07;15!UBERON:0004819;8.14e-07;15!UBERON:0001285;8.14e-07;15!UBERON:0007684;8.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.88e-16,9;UBERON:0006554,2.63e-10,47;UBERON:0002367,3.11e-10,11;UBERON:0010147,3.11e-10,11;UBERON:0009846,3.11e-10,11;UBERON:0003353,3.11e-10,11;UBERON:0004902,3.11e-10,11;UBERON:0003820,3.11e-10,11;UBERON:0009847,3.11e-10,11;UBERON:0001008,5.58e-10,48;UBERON:0004921,1.64e-09,118;UBERON:0008947,1.76e-09,38;UBERON:0003258,1.76e-09,38;UBERON:0003937,3.09e-09,12;UBERON:0005399,3.09e-09,12;UBERON:0004119,3.26e-09,160;UBERON:0000925,3.26e-09,160;UBERON:0006595,3.26e-09,160;UBERON:0001007,1.34e-08,145;UBERON:0001555,1.34e-08,145;UBERON:0007026,1.34e-08,145;UBERON:0004810,3.43e-08,10;UBERON:0001557,5.45e-08,19;UBERON:0000162,1.13e-07,14;UBERON:0001353,1.13e-07,14;UBERON:0000163,1.13e-07,14;UBERON:0006866,1.13e-07,14;UBERON:0000164,1.13e-07,14;UBERON:0000931,1.13e-07,14;UBERON:0005153,1.29e-07,37;UBERON:0000065,4.20e-07,54;UBERON:0004122,4.73e-07,15;UBERON:0005911,5.54e-07,82;UBERON:0001225,5.55e-07,12;UBERON:0008987,5.55e-07,12;UBERON:0004211,9.05e-07,15;UBERON:0009773,9.05e-07,15;UBERON:0001231,9.05e-07,15;UBERON:0001285,9.05e-07,15;UBERON:0007684,9.05e-07,15;UBERON:0004208,9.05e-07,15;UBERON:0000353,9.28e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,5.16041266653169,18.1428303672831,0.218441372130172,0.791300934685361,0.74259811776028,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0.50133791063589,1.44846518960824,0,0,0.283604451492204,0.886917589850256,0.527008714158756,0.589405839739707,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.825354125820202,0.626984899610432,0,0,0,0.402829317109147,0,0,0.735326160691737,3.24056779152704,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.61246251376468,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0.340296549480063,1.07633781413317,0.427114777637135,0,1.20036438433761,0.309157587715317,0.772921620136887,0,0.168776332241266,0,0.757301322732344,0,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,3.07597680103594,3.87744787179634,2.6511213287183,4.19117096383097,2.83243277320128,2.84724742933316,2.69662616320329,2.15843611637881,2.69323009862473,0,1.40241773803446,0.4115740113314,0,0,0,0,0,2.82873408649161,1.71567810298526,0.109750285408626,0,0,0,0,0,4.3299402607582,0,0.352226082707465,0,0,0.380508304469197,2.37061319387782,3.43394464837949,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.600686115687835,0,0.336393253036082,0.43596006883328,0.4400297149257,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0.428933980974443,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,2.61460037580088,5.89840647974137,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0,1.24782516918484,0.892144943985809,0.315404830067869,0,0,0,0,0,0,0.868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,2.77976734060731,8.02025881213139,2.3941057123333,2.41110341145674,2.91345868810747,3.54035920390445,4.96319574198153,2.84956747286335,0,1.46139224653261,0.949964660035881,0,0.510281115829547,0.431831832204279,0,0.270946437543853,1.00337954770971,3.56826782263054,11.6350641250021,2.0148727924996,0,0,0.769350375349168,2.29610251989794,0.650756789328606,1.03041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,1.65284915360978,0.576570202095319,0.382838137483752,0.30347334256665,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0,0,0.179872457583315,1.09814811894422,0.824686816419805,0,0,0,0.975267478179181,3.1682753652067,1.05650146756755,0.9554993798559,3.95935209470396,0,0,3.3171948762061,1.31535265576129,0,0,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0,0.709522128141196,2.11107635297664,0.329294892959902,0,0.699869440489966,0.0962221127255121,0,1.08890984861323,0.470719003883896,1.29151611801369,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.568272293612826,2.62618933211459,1.48482340416319,1.53580351049616,0,0,0,0,0,0.996239941255349,0,0,0.409074730008619,0,0.311039587661807,4.22381250392436,0.895105873378046,0,0.394573622547734,0,0,0,0,0,0.260427761085233,0,0,1.4793148277115,2.2882828526349,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.697118721393016,0.153900517007594,0,0.23056390438806,0.269272933229316,0.325942115766024,0.638002319463839,0.549585560411174,3.19820865611181,0,0,0,0,0,0,0,0,0.843992258112108,0.979396848954886,0.282706142867882,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,1.17398771359254,1.94224303627274,0,0,0,0,0,0,0.664653872707185,2.31694369112849,0.627865836814451,0,0,0.416024019039416,4.16543372004314,0.489961987071888,0.783532859223623,0,0,3.19295893253981,1.60796497589608,2.87404099686232,0,0,0.451961481561065,0.137041924646751,0,0,1.75996244461323,0.480952921509202,0.85381197895741,0.799238438328521,1.72908500584927,0,0,1.58460277786965,0,0.942776138467182,0.135904206073614,0,0.203996435272644,0,0,0,0,1.28929632425987,0,0,0,0,2.59582700648688,0,0,0.134366944973453,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0.422401346077626,1.25501137532991,0.191915197319445,0,0,0,2.714998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| ||
|short_description=p2@GPRC5A | |||
}} | }} |
Latest revision as of 08:27, 17 September 2015
Short description: | p2@GPRC5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPRC5A_5end |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | -87bp_to_ENST00000540125_5end |
EntrezGene: | GPRC5A |
HGNC: | 9836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.50e-30 | 253 |
mesothelial cell | 7.04e-13 | 19 |
kidney cell | 9.30e-09 | 17 |
kidney epithelial cell | 9.30e-09 | 17 |
kidney tubule cell | 3.43e-08 | 10 |
nephron tubule epithelial cell | 3.43e-08 | 10 |
endo-epithelial cell | 4.34e-08 | 42 |
squamous epithelial cell | 1.69e-07 | 63 |
kidney cortical cell | 5.55e-07 | 12 |
renal cortical epithelial cell | 5.55e-07 | 12 |
endodermal cell | 5.81e-07 | 58 |
epithelial cell of nephron | 9.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.28e-22 | 106 |
cell type cancer | 4.94e-15 | 143 |
disease of cellular proliferation | 4.04e-12 | 239 |
cancer | 1.32e-10 | 235 |