FFCP PHASE1:Hg19::chr11:22647541..22647554,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:22647541..22647554,+
|short_description=p3@GAS2
|description=CAGE_peak_3_at_GAS2_5end
|association_with_transcript=486bp_to_BC005077_5end
|EntrezGene=262...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSF3 | |UniProt=Q9BSF3 | ||
|association_with_transcript=486bp_to_BC005077_5end | |||
|cluster_id=chr11:22647541..22647554,+ | |||
|description=CAGE_peak_3_at_GAS2_5end | |||
|id=chr11:22647541..22647554,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.38e-24!119;CL:0002031!2.99e-24!124;CL:0000738!3.97e-23!140;CL:0000037!4.19e-22!172;CL:0000566!4.19e-22!172;CL:0002032!2.07e-21!165;CL:0000837!2.07e-21!165;CL:0000988!5.14e-21!182;CL:0000542!7.58e-21!53;CL:0000051!7.58e-21!53;CL:0000838!2.69e-20!52;CL:0000945!2.08e-14!24;CL:0000826!2.08e-14!24;CL:0000236!1.06e-08!14;CL:0002057!4.62e-08!42;CL:0000839!3.76e-07!70;CL:0000557!4.87e-07!71;CL:0000860!9.66e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.13e-23;53!CL:0000945;9.99e-21;24!CL:0000236;5.94e-13;13!CL:0000623;1.07e-10;3!CL:0000084;5.29e-10;25!CL:0000791;1.58e-09;18!CL:0000789;1.58e-09;18!CL:0002419;1.58e-09;18!CL:0002087;2.16e-08;104!CL:0000624;5.07e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.23e-35,52;CL:0000542,1.45e-34,53;CL:0000051,1.45e-34,53;CL:0002087,9.49e-24,115;CL:0002031,1.80e-22,120;CL:0000945,2.31e-21,24;CL:0000826,2.31e-21,24;CL:0000738,4.46e-20,136;CL:0000037,1.72e-15,168;CL:0002032,1.88e-15,161;CL:0000837,1.88e-15,161;CL:0000988,3.19e-14,177;CL:0000236,2.29e-12,14;CL:0000623,8.17e-11,3;CL:0000825,8.17e-11,3;CL:0000084,6.64e-10,25;CL:0000827,6.64e-10,25;CL:0000791,1.34e-09,18;CL:0000789,1.34e-09,18;CL:0002420,1.34e-09,18;CL:0002419,1.34e-09,18;CL:0000790,1.34e-09,18;CL:0000624,4.46e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;6.13e-23;53!CL:0000790;1.58e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.00e-07;4!DOID:1612;6.00e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.48e-07,4;DOID:1612,3.48e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-08!102;UBERON:0003061!1.63e-08!102;UBERON:0002193!1.79e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.50e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,2.67446920117829,2.13461532569859,2.12519109546934,0,0,0.928896739896456,0,0,0,1.78174561334694,1.13735385989937,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,0.436194716338694,0,0.242584061187816,0.697287110717054,0,0.619412741790207,0,0.512321413058201,0.709446689665756,1.03423704220986,2.5819387343353,1.35426486594342,0.188242339542605,0.545812300115692,0.898893937780338,0.306083892370903,1.28371610830437,0.639337125799041,0,0.598390972864896,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,1.5644487552606,1.08594422352558,0,0.736555271975129,1.26584954976354,0.422510572623884,0.212604299965044,0,0.22465726229299,0,0.32145117339416,0,0.59675003159727,0.365328307529268,1.75996244461323,2.18455444504853,1.77901850772711,1.70692089026603,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,1.91136614062614,1.32171328579026,3.36305137788922,0.526768169550154,1.7703879310245,0.786021525498329,2.46721798799411,0.167186495390678,1.30368906653436,0.946895611469467,0,0.111410456885174,0.294605907474837,0.886135578334485,0.812411591295047,0.128091319725675,0.260118695119756,0,0,0.289803085735052,1.18629250529648,0.535081656179426,3.1360657141493,0.339928028092699,1.14966148080576,0.34362744548263,2.78321661221453,0.318565414324097,0,0,1.6563263098555,0.383959833463255,0,0.236777252044017,0.821127996921047,2.01606743224732,2.67440195783507,3.04131248153878,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.717558542755448,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0.487894824518382,0.530119073285941,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.882926198829301,1.47586126251736,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,2.46331618947972,0.352193736052904,0.207328115540772,0.864719720501769,0.50496973370552,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,3.54655368363469,4.09692392233083,2.82354679815446,0,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.44737618286021,0.647142602455851,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0.276242966807689,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0.618246069886334,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0.290033387828457,0.255679882248303,0,0.330569830721956,0,1.40373983744043,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0,0,0.349934720244983,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0,0.238231775457789,2.05681136543097,0,0.540031437238115,0,0.106824071127473,0,0,0.929015875628594,0.144269212976445,0.355709216742071,0.159426272728822,0,0.5745161103971,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0.846458889008016,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0.586032717087576,0,0.557216921387392,0,0,0.296964680832639,0.921482106297696,0,0.281338832821026,1.22439575525196,1.15362711958732,0.211125408127993,0.398495976502139,0.552567831062295,0.755798243562828,0,0.738508832766417,0,0,1.07412704805365,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0,1.31189999994294,0,0.1137934482855,0.762760950878299,0,2.06846023944879,0,0.173624994933292,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0.139423744278603,0.307801034015188,0.113942055847001,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0,1.02193298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| ||
|short_description=p3@GAS2 | |||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p3@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 486bp_to_BC005077_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | Q9BSF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.23e-35 | 52 |
lymphocyte | 1.45e-34 | 53 |
common lymphoid progenitor | 1.45e-34 | 53 |
nongranular leukocyte | 9.49e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-22 | 120 |
lymphocyte of B lineage | 2.31e-21 | 24 |
pro-B cell | 2.31e-21 | 24 |
leukocyte | 4.46e-20 | 136 |
hematopoietic stem cell | 1.72e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.88e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-15 | 161 |
hematopoietic cell | 3.19e-14 | 177 |
B cell | 2.29e-12 | 14 |
natural killer cell | 8.17e-11 | 3 |
pro-NK cell | 8.17e-11 | 3 |
T cell | 6.64e-10 | 25 |
pro-T cell | 6.64e-10 | 25 |
mature alpha-beta T cell | 1.34e-09 | 18 |
alpha-beta T cell | 1.34e-09 | 18 |
immature T cell | 1.34e-09 | 18 |
mature T cell | 1.34e-09 | 18 |
immature alpha-beta T cell | 1.34e-09 | 18 |
CD4-positive, alpha-beta T cell | 4.46e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.48e-07 | 4 |
breast cancer | 3.48e-07 | 4 |