FFCP PHASE1:Hg19::chr17:73083998..73084036,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:73083998..73084036,+
|short_description=p2@SLC16A5
|description=CAGE_peak_2_at_SLC16A5_5end
|association_with_transcript=-18bp_to_ENST00000329783,NM_00469...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9121 | |EntrezGene=9121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10926 | |HGNC=10926 | ||
|TSSclassifier=strong | |||
|UniProt=O15375 | |UniProt=O15375 | ||
|association_with_transcript=-18bp_to_ENST00000329783,NM_004695,uc002jms.1,uc002jmt.2_5end | |||
|cluster_id=chr17:73083998..73084036,+ | |||
|description=CAGE_peak_2_at_SLC16A5_5end | |||
|id=chr17:73083998..73084036,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.85e-16!76;CL:0000860!6.36e-16!45;CL:0002057!8.56e-16!42;CL:0000557!1.25e-13!71;CL:0002194!5.29e-13!63;CL:0000576!5.29e-13!63;CL:0000040!5.29e-13!63;CL:0000559!5.29e-13!63;CL:0002009!1.19e-12!65;CL:0000839!3.12e-12!70;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0000063!3.98e-08!578;CL:0000066!4.88e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.16e-16;33!CL:0002057;4.16e-16;33!CL:0000473;5.04e-15;39!CL:0000234;5.04e-15;39!CL:0000576;4.63e-11;48!CL:0000766;1.73e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.98e-19,48;CL:0000234,1.98e-19,48;CL:0000860,4.70e-18,42;CL:0002057,4.70e-18,42;CL:0000766,1.41e-17,72;CL:0000557,1.73e-14,67;CL:0002194,1.18e-13,59;CL:0000576,1.18e-13,59;CL:0000040,1.18e-13,59;CL:0000559,1.18e-13,59;CL:0000839,2.28e-13,66;CL:0002009,3.21e-13,61;CL:0000763,5.98e-11,108;CL:0000049,5.98e-11,108;CL:0000066,9.84e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.36e-13!80;UBERON:0001474!8.33e-11!86;UBERON:0002390!7.08e-10!102;UBERON:0003061!7.08e-10!102;UBERON:0002193!2.40e-09!112;UBERON:0004765!7.29e-09!101;UBERON:0001434!7.29e-09!101;UBERON:0000926!7.40e-08!448;UBERON:0004120!7.40e-08!448;UBERON:0006603!7.40e-08!448;UBERON:0002405!3.25e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-13,76;UBERON:0004765,3.05e-12,90;UBERON:0001474,7.00e-12,82;UBERON:0001434,7.98e-11,100;UBERON:0002390,3.87e-10,98;UBERON:0003061,3.87e-10,98;UBERON:0002405,1.77e-09,93;UBERON:0002193,6.14e-09,108 | |||
|phase1_expression=1.45342703416445,1.71280419112787,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,4.88460817580699,2.40285509343189,0.791300934685361,1.36142988256051,3.31397375727916,0,0,0.730310090387373,0.487932798790507,1.47745269692145,0.612002073732759,1.25381888591235,0.572471974262113,0.958120975510189,0.125542639594803,0.382067028739756,0.0821005894499457,0,1.96682138424452,1.15148819429164,4.02521920621798,0.919421224478927,0.90361775633475,2.9580320813343,0,0,2.34880351467878,4.9859586767869,6.01633342410425,3.90619567288533,2.46307021663917,0.971680998056939,2.06060454107349,5.67053131240302,5.66813915533214,8.24785808038575,5.11343881192506,4.93401465626191,4.95530193432166,2.01384674625505,3.33008918487831,2.36482229888585,6.89491361473237,5.80936215225443,8.12558919566051,6.02375486536335,4.63940455098338,2.24723484445085,6.42776173978895,3.85114832491312,0,2.63881040149373,5.18605509816243,3.83602275479425,5.22376629531451,4.53908179752912,3.11411124497787,4.01997864410789,3.65038042894141,3.25783267057675,0,2.20966581592539,2.53169909952708,1.69004229049553,3.18906449947565,2.51590374610051,5.72876018847125,4.8056605709282,5.94684670779196,1.14005097496499,0.79566670879636,0.547992461293902,0,0,0,0.853460445133014,1.20118796110804,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,1.05353633910031,1.37696839079683,0.393010762749165,0.616804496998528,0.167186495390678,0.651844533267181,0,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.384273959177026,0.520237390239513,0.986627427622057,1.10540007114339,2.02862160014537,0.889719378972363,1.07016331235885,0,0.566546713487831,0.766440987203842,1.03088233644789,0,0.637130828648193,0.651083453856419,0,0.752875595388864,0.639933055772092,0,0.473554504088034,0,0,0,0.289648807765598,0,0,0.639312809217652,0.722878304769133,1.00267582127178,2.02785126545153,0,2.91980922181582,1.13441780596881,0.443458794925128,0.87834785693126,1.76821751921912,4.73583874780305,1.48313777113772,0.649094787309367,0.522389211897802,1.06366368415092,0,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0,1.25849830862972,1.92582629358047,1.67195973229448,0.516833518338658,0.35576626268671,0,2.41697590265488,0.760272105718513,0.976248230192678,0,3.24056779152704,0.625098097988558,0.673588117878509,0.788280363383256,3.06633274931766,0,2.01521918323448,3.9534125230819,3.87780264148325,2.18047026071267,0.993943903390637,0,0.529636723252875,0,0.354668382198357,1.12135520028461,1.06748995729705,0,0,1.48181739276657,0.490385709340376,0,0,0.937285727335186,0,0.570471821544449,1.79338416662161,1.17434498643765,0.647491777472526,0.140450806702248,1.63323337003915,1.10550885580591,1.13658359293342,1.18800285728205,2.96720315134268,0.910161361938026,2.87447256726495,0.505008341862199,1.50142223846357,0.277064115484183,1.75591048352335,0.612975591598039,1.95309476578576,0.113432183160021,2.33206526395521,2.13557388818567,0.635795703478686,1.20036438433761,1.03052529238439,2.57640540045629,2.04728541964749,1.0126579934476,0.779496041289589,2.77677151668526,1.28869858099219,0.80823028409406,2.84007674013291,0.806016785821122,2.03472710772585,1.15956511897978,0.545492241181669,0.286804595389004,3.53723747775827,2.78312513475119,3.60201222895507,2.07322110030741,3.5324919122588,1.45990943630332,1.56449532329816,5.14592750554308,4.14404764057442,3.25057549622385,0.721879481669586,0.946454400318751,1.51726221070292,1.68707720918437,1.7647035637183,1.30727666455444,1.66089433377768,0.943819157121151,1.76599318612811,2.30848294167834,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,2.09080345523293,0.686271241194102,0.439001141634502,1.1240175325762,1.00528972411631,1.38882667737794,0.977424915930974,1.03993478527958,0,0.463721619900307,0.469634776943287,1.15493158208859,0.462985512576611,1.52203321787679,0,0,1.47730203652438,1.40402559083543,2.22946743433092,0,0.16798212819886,0,0,1.16253575405585,0,0,0.352193736052904,8.70778085271243,10.6648765528551,11.3618190083742,1.20645999155121,4.58386110669933,4.68869788840188,3.4214489204541,1.64523988325318,2.10240140490742,2.00078502841405,0,0.43596006883328,0.1466765716419,1.29271715757778,10.7296933755565,0,1.06375246633948,0,1.54324424557285,4.25547396069835,1.5985330740966,0.428933980974443,2.17048642156577,3.29296134712308,0,0.355391948742546,0.791951872933429,1.50719688529793,0.871533458600294,2.19940580600526,3.64871341923571,2.51128545716063,2.10833939483032,0.479249710983165,0,1.42636905040718,0.144781306667579,1.02738161275192,0.179060963239896,0,0.197030760201927,0,0.898401253958239,0.254094624222463,0,0,0,0,2.99602809578873,5.9832291840805,2.90090859405225,2.20844685094452,7.00238729483548,2.71265023699736,3.74347550755453,3.21172179834891,4.25796520591624,3.04567678981054,0.601892199455438,0,0,1.32845119707087,1.47495334833363,1.04260337361699,0.391602314925481,0.343143423810856,1.6541442089831,3.45142721309787,1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| ||
|short_description=p2@SLC16A5 | |||
}} | }} |
Latest revision as of 09:52, 17 September 2015
Short description: | p2@SLC16A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC16A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000329783, NM_004695, uc002jms.1, uc002jmt.2_5end |
EntrezGene: | SLC16A5 |
HGNC: | 10926 |
UniProt: | O15375 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.98e-19 | 48 |
phagocyte | 1.98e-19 | 48 |
classical monocyte | 4.70e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.70e-18 | 42 |
myeloid leukocyte | 1.41e-17 | 72 |
granulocyte monocyte progenitor cell | 1.73e-14 | 67 |
monopoietic cell | 1.18e-13 | 59 |
monocyte | 1.18e-13 | 59 |
monoblast | 1.18e-13 | 59 |
promonocyte | 1.18e-13 | 59 |
myeloid lineage restricted progenitor cell | 2.28e-13 | 66 |
macrophage dendritic cell progenitor | 3.21e-13 | 61 |
myeloid cell | 5.98e-11 | 108 |
common myeloid progenitor | 5.98e-11 | 108 |
epithelial cell | 9.84e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.69e-13 | 76 |
skeletal element | 3.05e-12 | 90 |
bone element | 7.00e-12 | 82 |
skeletal system | 7.98e-11 | 100 |
hematopoietic system | 3.87e-10 | 98 |
blood island | 3.87e-10 | 98 |
immune system | 1.77e-09 | 93 |
hemolymphoid system | 6.14e-09 | 108 |