FFCP PHASE1:Hg19::chr3:190231744..190231761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3556 | |EntrezGene=3556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5995 | |HGNC=5995 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPH3,A8K6K4 | |UniProt=Q9NPH3,A8K6K4 | ||
|association_with_transcript=-78bp_to_ENST00000072516,ENST00000412504,ENST00000443369,NM_001167928,NM_001167929,NM_001167930,NM_001167931,NM_002182,NM_134470_5end | |association_with_transcript=-78bp_to_ENST00000072516,ENST00000412504,ENST00000443369,NM_001167928,NM_001167929,NM_001167930,NM_001167931,NM_002182,NM_134470_5end | ||
|cluster_id=chr3:190231744..190231761,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_IL1RAP_5end | |description=CAGE_peak_4_at_IL1RAP_5end | ||
|id=chr3:190231744..190231761,+ | |id=chr3:190231744..190231761,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.10e-15!42;CL:0000766!9.44e-14!76;CL:0000860!9.73e-14!45;CL:0000557!6.42e-11!71;CL:0002009!5.79e-10!65;CL:0000763!2.40e-09!112;CL:0000049!2.40e-09!112;CL:0002194!6.12e-09!63;CL:0000576!6.12e-09!63;CL:0000040!6.12e-09!63;CL:0000559!6.12e-09!63;CL:0000839!1.07e-08!70;CL:0000094!5.45e-08!8 | |ontology_enrichment_celltype=CL:0002057!5.10e-15!42;CL:0000766!9.44e-14!76;CL:0000860!9.73e-14!45;CL:0000557!6.42e-11!71;CL:0002009!5.79e-10!65;CL:0000763!2.40e-09!112;CL:0000049!2.40e-09!112;CL:0002194!6.12e-09!63;CL:0000576!6.12e-09!63;CL:0000040!6.12e-09!63;CL:0000559!6.12e-09!63;CL:0000839!1.07e-08!70;CL:0000094!5.45e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.87e-31;33!CL:0002057;9.87e-31;33!CL:0000094;7.55e-25;8!CL:0000473;1.65e-19;39!CL:0000234;1.65e-19;39!CL:0000081;6.49e-18;11!CL:0000775;7.40e-18;3!CL:0000576;1.41e-15;48!CL:0000766;1.25e-12;69!CL:0000771;2.03e-12;2!CL:0000763;8.87e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.01e-27,72;CL:0000094,8.12e-25,8;CL:0000860,1.28e-24,42;CL:0002057,1.28e-24,42;CL:0000763,7.64e-23,108;CL:0000049,7.64e-23,108;CL:0000473,3.84e-21,48;CL:0000234,3.84e-21,48;CL:0000557,2.23e-18,67;CL:0002009,5.22e-18,61;CL:0000081,6.84e-18,11;CL:0000775,7.67e-18,3;CL:0002194,2.82e-16,59;CL:0000576,2.82e-16,59;CL:0000040,2.82e-16,59;CL:0000559,2.82e-16,59;CL:0000839,3.02e-14,66;CL:0000738,6.58e-14,136;CL:0002032,1.17e-13,161;CL:0000837,1.17e-13,161;CL:0000037,7.05e-13,168;CL:0000771,1.93e-12,2;CL:0000988,5.76e-12,177;CL:0002031,1.33e-07,120;CL:0002087,6.07e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.00e-19;42!CL:0000049;4.22e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-08!102;UBERON:0003061!1.51e-08!102;UBERON:0002371!5.12e-08!80;UBERON:0002193!2.00e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!1.51e-08!102;UBERON:0003061!1.51e-08!102;UBERON:0002371!5.12e-08!80;UBERON:0002193!2.00e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.76e-16,98;UBERON:0003061,1.76e-16,98;UBERON:0002371,8.42e-16,76;UBERON:0002193,1.43e-14,108;UBERON:0001474,2.14e-14,82;UBERON:0004765,8.24e-13,90;UBERON:0002405,2.75e-12,93;UBERON:0001434,3.47e-11,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0.919421224478927,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,1.16318591023652,1.13362783106643,0.485168122375632,0.929716147622738,0.411167888021826,1.54853185447552,1.43846196161075,1.0246428261164,1.18241114944293,0.689491361473237,0.645484683583826,0,1.69418105588344,1.36453075028923,0.674170453335254,0,2.56743221660875,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,1.45104619314292,1.70215567407342,0,1.00499466102697,0,1.08594422352558,0,1.84138817993782,0.632924774881769,0,0,0.419317291016752,0,0.450530678524519,0.48217676009124,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,2.3858578411533,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,10.5424333948851,3.87780264148325,0.436094052142534,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.473227200159376,0,0.241011029883482,0.55146986366197,0,0.237270619111097,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0.555530670951178,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.358234090811393,0.581267877027924,0,0,0,0.414656231081544,0.576479813667846,0.37872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,2.60279707715243,0,0,0,8.23907726341901,11.966458368161,10.3603878359009,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0.61384789315225,0,0.256278298511402,0,0.321707842287215,0,0,0,0.328508624055237,0,0,0.120859449591622,0.802025881213139,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.576570202095319,0.765676274967505,0.4046311234222,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0.855877976067841,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.659006605437454,0,3.36942951335251,0,0.229723400206959,1.01489521846434,0,1.13929437434833,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0,0,0,0,2.50634477090067,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0.334330152832435,0,0.71623345421307,0,0.921482106297696,0,0.281338832821026,0.667852230137435,0.659215496907038,0,0,0,0.251932747854276,0.715880777515084,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0.658156191461918,0.10893846351899,0.697118721393016,0,0.455768223388005,0.23056390438806,0.179515288819544,0,0.638002319463839,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0.317873157960757,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0.173559738335131,0.293977192243133,0,0.17472666824203,0.343972064943233,0.0967563312890851,0,0,0,0,0,0.411125773940253,0.397429223405979,0.316553979779393,0,0,0.426905989478705,0,0,0,0.514784993585894,0.14405479798815,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0,0.288950589901519,0,0,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,1.5748172408605,0.77380195455795,0.242998226632099,0,0.0788057072991982,0.157363764404994,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.1133120915201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| ||
|short_description=p4@IL1RAP | |short_description=p4@IL1RAP | ||
}} | }} |
Latest revision as of 09:58, 17 September 2015
Short description: | p4@IL1RAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL1RAP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -78bp_to_ENST00000072516, ENST00000412504, ENST00000443369, NM_001167928, NM_001167929, NM_001167930, NM_001167931, NM_002182, NM_134470_5end |
EntrezGene: | IL1RAP |
HGNC: | 5995 |
UniProt: | Q9NPH3A8K6K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.01e-27 | 72 |
granulocyte | 8.12e-25 | 8 |
classical monocyte | 1.28e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-24 | 42 |
myeloid cell | 7.64e-23 | 108 |
common myeloid progenitor | 7.64e-23 | 108 |
defensive cell | 3.84e-21 | 48 |
phagocyte | 3.84e-21 | 48 |
granulocyte monocyte progenitor cell | 2.23e-18 | 67 |
macrophage dendritic cell progenitor | 5.22e-18 | 61 |
blood cell | 6.84e-18 | 11 |
neutrophil | 7.67e-18 | 3 |
monopoietic cell | 2.82e-16 | 59 |
monocyte | 2.82e-16 | 59 |
monoblast | 2.82e-16 | 59 |
promonocyte | 2.82e-16 | 59 |
myeloid lineage restricted progenitor cell | 3.02e-14 | 66 |
leukocyte | 6.58e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.17e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-13 | 161 |
hematopoietic stem cell | 7.05e-13 | 168 |
eosinophil | 1.93e-12 | 2 |
hematopoietic cell | 5.76e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.33e-07 | 120 |
nongranular leukocyte | 6.07e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.76e-16 | 98 |
blood island | 1.76e-16 | 98 |
bone marrow | 8.42e-16 | 76 |
hemolymphoid system | 1.43e-14 | 108 |
bone element | 2.14e-14 | 82 |
skeletal element | 8.24e-13 | 90 |
immune system | 2.75e-12 | 93 |
skeletal system | 3.47e-11 | 100 |