FFCP PHASE1:Hg19::chr3:190231855..190231888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3556 | |EntrezGene=3556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5995 | |HGNC=5995 | ||
|TSSclassifier=strong | |||
|UniProt=C9JT28 | |UniProt=C9JT28 | ||
|association_with_transcript=0bp_to_ENST00000422485,ENST00000422625,ENST00000465496_5end | |association_with_transcript=0bp_to_ENST00000422485,ENST00000422625,ENST00000465496_5end | ||
|cluster_id=chr3:190231855..190231888,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_IL1RAP_5end | |description=CAGE_peak_1_at_IL1RAP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.40e-18!42;CL:0000766!1.98e-16!76;CL:0000860!5.03e-16!45;CL:0000557!7.92e-14!71;CL:0000763!8.34e-14!112;CL:0000049!8.34e-14!112;CL:0002009!9.03e-13!65;CL:0002194!8.32e-12!63;CL:0000576!8.32e-12!63;CL:0000040!8.32e-12!63;CL:0000559!8.32e-12!63;CL:0000839!3.62e-11!70 | |ontology_enrichment_celltype=CL:0002057!5.40e-18!42;CL:0000766!1.98e-16!76;CL:0000860!5.03e-16!45;CL:0000557!7.92e-14!71;CL:0000763!8.34e-14!112;CL:0000049!8.34e-14!112;CL:0002009!9.03e-13!65;CL:0002194!8.32e-12!63;CL:0000576!8.32e-12!63;CL:0000040!8.32e-12!63;CL:0000559!8.32e-12!63;CL:0000839!3.62e-11!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-18;33!CL:0002057;1.71e-18;33!CL:0000473;2.07e-11;39!CL:0000234;2.07e-11;39!CL:0000576;7.00e-10;48!CL:0000766;5.09e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.71e-18;33!CL:0002057;1.71e-18;33!CL:0000473;2.07e-11;39!CL:0000234;2.07e-11;39!CL:0000576;7.00e-10;48!CL:0000766;5.09e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.33e-18,42;CL:0002057,5.33e-18,42;CL:0000766,2.41e-17,72;CL:0000557,1.19e-14,67;CL:0000763,2.78e-14,108;CL:0000049,2.78e-14,108;CL:0000473,1.21e-13,48;CL:0000234,1.21e-13,48;CL:0002009,1.33e-13,61;CL:0002194,1.34e-12,59;CL:0000576,1.34e-12,59;CL:0000040,1.34e-12,59;CL:0000559,1.34e-12,59;CL:0000839,8.45e-12,66;CL:0000223,8.41e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-13;42 | |ontology_enrichment_development_v019=CL:0002057;1.44e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.60e-12!102;UBERON:0003061!5.60e-12!102;UBERON:0002371!1.81e-10!80;UBERON:0002193!8.93e-10!112;UBERON:0002405!8.28e-09!115;UBERON:0001474!1.04e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!5.60e-12!102;UBERON:0003061!5.60e-12!102;UBERON:0002371!1.81e-10!80;UBERON:0002193!8.93e-10!112;UBERON:0002405!8.28e-09!115;UBERON:0001474!1.04e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.77e-12,98;UBERON:0003061,1.77e-12,98;UBERON:0002371,4.75e-11,76;UBERON:0002193,3.78e-10,108;UBERON:0001474,4.31e-08,82;UBERON:0002405,4.44e-08,93;UBERON:0004765,8.60e-08,90 | |||
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| ||
|short_description=p1@IL1RAP | |short_description=p1@IL1RAP | ||
}} | }} |
Latest revision as of 09:59, 17 September 2015
Short description: | p1@IL1RAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL1RAP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000422485, ENST00000422625, ENST00000465496_5end |
EntrezGene: | IL1RAP |
HGNC: | 5995 |
UniProt: | C9JT28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.33e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.33e-18 | 42 |
myeloid leukocyte | 2.41e-17 | 72 |
granulocyte monocyte progenitor cell | 1.19e-14 | 67 |
myeloid cell | 2.78e-14 | 108 |
common myeloid progenitor | 2.78e-14 | 108 |
defensive cell | 1.21e-13 | 48 |
phagocyte | 1.21e-13 | 48 |
macrophage dendritic cell progenitor | 1.33e-13 | 61 |
monopoietic cell | 1.34e-12 | 59 |
monocyte | 1.34e-12 | 59 |
monoblast | 1.34e-12 | 59 |
promonocyte | 1.34e-12 | 59 |
myeloid lineage restricted progenitor cell | 8.45e-12 | 66 |
endodermal cell | 8.41e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.77e-12 | 98 |
blood island | 1.77e-12 | 98 |
bone marrow | 4.75e-11 | 76 |
hemolymphoid system | 3.78e-10 | 108 |
bone element | 4.31e-08 | 82 |
immune system | 4.44e-08 | 93 |
skeletal element | 8.60e-08 | 90 |