FFCP PHASE1:Hg19::chr2:46300960..46301034,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9401 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000480633_5end | |||
|cluster_id=chr2:46300960..46301034,+ | |||
|description=CAGE_peak_3_at_PRKCE_5end | |||
|id=chr2:46300960..46301034,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.42e-18!119;CL:0000213!6.28e-17!57;CL:0000215!6.28e-17!57;CL:0002139!2.22e-16!24;CL:0000115!4.38e-14!35;CL:0000071!2.42e-12!18;CL:0002546!2.42e-12!18;CL:0002078!2.08e-11!44;CL:0000055!4.99e-11!180;CL:0000057!7.02e-11!75;CL:0000220!1.60e-08!246;CL:0000076!3.38e-08!62;CL:0002321!3.74e-08!248;CL:0000066!9.13e-08!254;CL:0000192!7.18e-07!42;CL:0000514!7.18e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.55e-22;24!CL:0000115;3.31e-17;36!CL:0000071;1.47e-16;18!CL:0000213;7.91e-13;58!CL:0000215;7.91e-13;58!CL:0002078;9.10e-11;45!CL:1000413;1.04e-08;9!CL:0002138;3.50e-07;6!CL:0002543;4.90e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.45e-23,58;CL:0000215,2.45e-23,58;CL:0002139,3.16e-22,24;CL:0000222,4.10e-21,121;CL:0000115,1.25e-20,36;CL:0000071,1.36e-16,18;CL:0002546,1.36e-16,18;CL:0002078,2.04e-16,45;CL:0000076,4.71e-11,63;CL:0002321,5.72e-11,250;CL:0000057,9.73e-10,76;CL:0000066,5.41e-09,253;CL:1000413,9.59e-09,9;CL:0005020,3.34e-07,6;CL:0002138,3.34e-07,6;CL:0005022,3.34e-07,6;CL:0002543,4.90e-07,6;CL:0000192,4.95e-07,43;CL:0000514,4.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;1.47e-16;18!CL:0000222;1.70e-07;121!CL:0005022;3.50e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.52e-20!79;UBERON:0007798!1.52e-20!79;UBERON:0000477!2.73e-17!286;UBERON:0000055!2.73e-15!69;UBERON:0001981!5.24e-13!60;UBERON:0007500!5.24e-13!60;UBERON:0004537!5.24e-13!60;UBERON:0006965!5.24e-13!60;UBERON:0004535!6.21e-13!110;UBERON:0001986!2.42e-12!18;UBERON:0004638!2.42e-12!18;UBERON:0004852!2.42e-12!18;UBERON:0003914!2.87e-12!118;UBERON:0001009!3.65e-12!113;UBERON:0000487!8.80e-12!22;UBERON:0004872!1.30e-11!84;UBERON:0000475!2.77e-11!365;UBERON:0004111!5.70e-11!241;UBERON:0000490!2.01e-10!138;UBERON:0000119!4.31e-10!312;UBERON:0000483!6.68e-10!309;UBERON:0000481!1.54e-09!347;UBERON:0006914!4.22e-09!25;UBERON:0002100!4.67e-09!216;UBERON:0000467!5.77e-09!625;UBERON:0000480!8.26e-09!626;UBERON:0000468!1.07e-08!659;UBERON:0001637!1.88e-08!42;UBERON:0003509!1.88e-08!42;UBERON:0004572!1.88e-08!42;UBERON:0000025!1.06e-07!194;UBERON:0005256!2.00e-07!143;UBERON:0003104!2.16e-07!238;UBERON:0009142!2.16e-07!238;UBERON:0007625!3.63e-07!11;UBERON:0000947!4.46e-07!21;UBERON:0010191!4.46e-07!21;UBERON:0000064!4.75e-07!219;UBERON:0004573!9.38e-07!33;UBERON:0004571!9.38e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.47e-16;18!UBERON:0001986;1.47e-16;18!UBERON:0004852;1.47e-16;18!UBERON:0000487;2.02e-15;22!UBERON:0006914;1.19e-12;25!UBERON:0000490;3.01e-12;33!UBERON:0002049;5.15e-11;75!UBERON:0007798;5.15e-11;75!UBERON:0000055;2.00e-10;65!UBERON:0007500;6.67e-10;56!UBERON:0001981;6.67e-10;56!UBERON:0004537;6.67e-10;56!UBERON:0007625;1.06e-09;11!UBERON:0003915;1.04e-08;9!UBERON:0004700;1.04e-08;9!UBERON:0001917;1.04e-08;9!UBERON:0003914;3.52e-08;74!UBERON:0000947;8.04e-08;21!UBERON:0010191;8.04e-08;21!UBERON:0001637;1.23e-07;42!UBERON:0003509;1.23e-07;42!UBERON:0004572;1.23e-07;42!UBERON:0001638;8.93e-07;9!UBERON:0003920;8.93e-07;9!UBERON:0004582;8.93e-07;9!UBERON:0004573;9.32e-07;33!UBERON:0004571;9.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.65e-22,78;UBERON:0007798,1.65e-22,78;UBERON:0000055,3.48e-17,68;UBERON:0004638,1.36e-16,18;UBERON:0001986,1.36e-16,18;UBERON:0004852,1.36e-16,18;UBERON:0000487,1.65e-15,22;UBERON:0007500,2.67e-14,59;UBERON:0001981,2.67e-14,59;UBERON:0004537,2.67e-14,59;UBERON:0006965,2.67e-14,59;UBERON:0004535,6.87e-13,109;UBERON:0006914,1.00e-12,25;UBERON:0001009,4.54e-12,112;UBERON:0003914,9.74e-12,117;UBERON:0000490,1.90e-10,148;UBERON:0004872,1.27e-09,83;UBERON:0007625,2.21e-09,11;UBERON:0001637,4.25e-09,42;UBERON:0003509,4.25e-09,42;UBERON:0004572,4.25e-09,42;UBERON:0003915,9.59e-09,9;UBERON:0004700,9.59e-09,9;UBERON:0001917,9.59e-09,9;UBERON:0000947,4.67e-08,21;UBERON:0010191,4.67e-08,21;UBERON:0004573,1.29e-07,33;UBERON:0004571,1.29e-07,33;UBERON:0001444,2.11e-07,49;UBERON:0004111,4.29e-07,240;UBERON:0001638,8.61e-07,9;UBERON:0003920,8.61e-07,9;UBERON:0004582,8.61e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,0,1.74753097704138,0.263766978228454,0,0.331397375727916,2.01697543935533,0,1.46062018077475,1.46379839637152,1.72369481307503,1.22400414746552,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.144846518960824,0,3.40644409211845,15.6927796492353,18.1818105919302,20.0263311380327,8.38266083185361,0,0,0,0,0,0,0,0,7.55297147993479,6.881876760849,9.02565304179745,7.91431118693613,5.45349267072878,8.52865930014209,8.77778859454604,58.919021090607,75.4224476895826,64.2663576508167,7.65375702507379,23.5684352772739,5.12530320851156,14.7065232138347,14.5825550618717,23.2179293538607,11.0019392586823,9.57197584108239,10.7321646226118,19.9345788509307,9.52649068438118,0,0,0,0.496971951695318,3.92554586160197,3.97227542439656,3.72887606973458,1.77334191099179,0,2.1349799145941,4.9333509683432,0.311211035399766,3.50247747381189,0.326923806226917,1.21085942115945,0.576175924479999,7.0296429550139,3.1216007683032,0,0,0.704606991862589,0.809364721840658,0,18.5780295841953,14.2487808081651,7.12947890112782,11.8800285728205,14.0942149688777,0,0.718618141816238,5.89176398839232,3.1279629967991,19.3944880838928,3.95079858792754,6.12975591598039,13.0707111248739,0.907457465280168,11.660326319776,10.4643120521098,0.211931901159562,3.90118424909723,0.721367704669072,3.60696756063881,3.16398655763703,2.70042131586026,1.46155507741798,1.51460264546469,1.47279837827679,0,4.9701342952326,1.30977727695932,1.3564847384839,0,0,0,0,0,0,0,0,0,4.69348596989448,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.828147600278907,1.01150814046861,0.482022059766964,0.882351781859152,0.653638332277218,0.71181185733329,0.674156540800822,0.392442930250692,0.769494313892781,9.59602091012043,0,0,0,0,0,1.18157981336281,0,0.245976877086227,34.6566976803022,0,0,0,0,7.81939932744779,0,18.7630744632855,1.04337364477569,25.1254605664658,8.8063533134255,13.4265798647217,5.89787871927255,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901029173531752,0,1.68196626518041,0,1.7601188597028,9.95392211334889,0,0,1.59562869950922,2.08014873822732,0,0,0.266422179016099,3.28849385413739,0,0.823240336780769,1.30294473717494,2.84313558994037,0.791951872933429,0.904318131178758,0,0.299918973546171,0,0,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.813795071099207,11.6463682457252,19.0919018012963,18.1357777289025,8.78560612445349,0.902838299183157,0,0,0.664225598535437,0.368738337083406,2.69339204851057,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0.744323423456331,1.68808170616869,0.841980283299221,1.40953064181271,1.53512174720011,0.64341568457443,0,0.462629081407967,0.532685175939381,0.9033987161519,4.67328986265259,0.232420756919918,0,0.200506470303285,0,3.67406234126742,2.36718518408732,0.655622074797121,2.70719767744447,0.231046011313244,0.784349769176855,2.92278449306521,0.316654886678627,11.3733384070897,18.8804012856932,11.6594594695155,10.7959076883203,1.35473218771926,0.501689773854853,2.80363900349542,0,0.895499018888713,0,0,1.02580050046556,4.26419039409617,18.8719468905296,25.6572119002828,0.824125183365091,0.82509499920588,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.827019434907183,0.322260734604821,0,0.511359764496605,0.267096106940212,0,0.384380134730212,0.382838137483752,0,1.85938219718914,4.40737285562896,1.3940745403212,0.924100740528266,3.19383618190213,0,1.11194531462352,0.572499546967965,2.60510858551767,7.90948561796815,13.9160041564392,1.02359116524534,0,0,0,1.79872457583315,0.54907405947211,1.7671860351853,1.41527737101321,4.75530963519025,0,1.46290121726877,2.19342140668156,15.8475220135133,4.91399681068749,2.96951407102797,0,0.551365343546124,0,1.75380354101505,0.578775534266688,1.31178950409327,2.02910376962704,1.239293992399,0.281695602532241,3.15504974848913,2.94747123039363,2.49669736036875,1.41904425628239,0,0,0.75894634753143,3.49934720244983,0,0.670302275535787,0,23.3476625926412,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,4.54175355742871,0,0,21.5943471572874,4.53614521001611,1.78178808499583,0,0,0.422008249231538,25.0444586301538,7.41617434020418,0,0.996239941255349,0.276283915531148,0,0.511343412510774,0,2.17727711363265,3.95420745048238,1.07412704805365,0,2.07151151837561,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0.341380344856499,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,1.85195387982283,0,0.538651809526579,3.41826167541004,0,3.68006342080066,0.108647371922008,19.778071903379,3.20591576906518,39.444573425379,0,0,0,0,0,0,0,0,22.7877909690269,9.14103725691227,0,0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| |||
|short_description=p3@PRKCE | |||
}} |
Latest revision as of 10:18, 17 September 2015
Short description: | p3@PRKCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000480633_5end |
EntrezGene: | PRKCE |
HGNC: | 9401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.45e-23 | 58 |
barrier cell | 2.45e-23 | 58 |
endothelial cell of vascular tree | 3.16e-22 | 24 |
mesodermal cell | 4.10e-21 | 121 |
endothelial cell | 1.25e-20 | 36 |
blood vessel endothelial cell | 1.36e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.36e-16 | 18 |
meso-epithelial cell | 2.04e-16 | 45 |
squamous epithelial cell | 4.71e-11 | 63 |
embryonic cell | 5.72e-11 | 250 |
fibroblast | 9.73e-10 | 76 |
epithelial cell | 5.41e-09 | 253 |
endothelial cell of artery | 9.59e-09 | 9 |
lymphangioblast | 3.34e-07 | 6 |
endothelial cell of lymphatic vessel | 3.34e-07 | 6 |
vascular lymphangioblast | 3.34e-07 | 6 |
vein endothelial cell | 4.90e-07 | 6 |
smooth muscle cell | 4.95e-07 | 43 |
smooth muscle myoblast | 4.95e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.65e-22 | 78 |
vascular system | 1.65e-22 | 78 |
vessel | 3.48e-17 | 68 |
blood vessel endothelium | 1.36e-16 | 18 |
endothelium | 1.36e-16 | 18 |
cardiovascular system endothelium | 1.36e-16 | 18 |
simple squamous epithelium | 1.65e-15 | 22 |
epithelial tube open at both ends | 2.67e-14 | 59 |
blood vessel | 2.67e-14 | 59 |
blood vasculature | 2.67e-14 | 59 |
vascular cord | 2.67e-14 | 59 |
cardiovascular system | 6.87e-13 | 109 |
squamous epithelium | 1.00e-12 | 25 |
circulatory system | 4.54e-12 | 112 |
epithelial tube | 9.74e-12 | 117 |
unilaminar epithelium | 1.90e-10 | 148 |
splanchnic layer of lateral plate mesoderm | 1.27e-09 | 83 |
pigment epithelium of eye | 2.21e-09 | 11 |
artery | 4.25e-09 | 42 |
arterial blood vessel | 4.25e-09 | 42 |
arterial system | 4.25e-09 | 42 |
endothelial tube | 9.59e-09 | 9 |
arterial system endothelium | 9.59e-09 | 9 |
endothelium of artery | 9.59e-09 | 9 |
aorta | 4.67e-08 | 21 |
aortic system | 4.67e-08 | 21 |
systemic artery | 1.29e-07 | 33 |
systemic arterial system | 1.29e-07 | 33 |
subdivision of head | 2.11e-07 | 49 |
anatomical conduit | 4.29e-07 | 240 |
vein | 8.61e-07 | 9 |
venous blood vessel | 8.61e-07 | 9 |
venous system | 8.61e-07 | 9 |