FFCP PHASE1:Hg19::chr17:73257945..73257985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51081 | |EntrezGene=51081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14499 | |HGNC=14499 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc002jnn.3_5end | |association_with_transcript=-7bp_to_uc002jnn.3_5end | ||
|cluster_id=chr17:73257945..73257985,+ | |||
|description=CAGE_peak_1_at_MRPS7_5end | |description=CAGE_peak_1_at_MRPS7_5end | ||
|id=chr17:73257945..73257985,+ | |id=chr17:73257945..73257985,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.76e-26!254;CL:0002321!2.61e-20!248;CL:0000220!3.81e-20!246;CL:0000222!3.49e-11!119;CL:0000076!2.34e-08!62;CL:0000548!1.62e-07!679;CL:0000004!1.62e-07!679;CL:0000255!1.62e-07!679;CL:0000213!3.96e-07!57;CL:0000215!3.96e-07!57;CL:0000012!5.59e-07!682 | |ontology_enrichment_celltype=CL:0000066!1.76e-26!254;CL:0002321!2.61e-20!248;CL:0000220!3.81e-20!246;CL:0000222!3.49e-11!119;CL:0000076!2.34e-08!62;CL:0000548!1.62e-07!679;CL:0000004!1.62e-07!679;CL:0000255!1.62e-07!679;CL:0000213!3.96e-07!57;CL:0000215!3.96e-07!57;CL:0000012!5.59e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.94e-27,253;CL:0002321,2.49e-20,250;CL:0000222,3.73e-11,121;CL:0000076,3.86e-08,63;CL:0000213,1.61e-07,58;CL:0000215,1.61e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.72e-19!235;DOID:14566!6.44e-18!239;DOID:0050687!6.13e-17!143;DOID:305!4.56e-13!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.72e-19,235;DOID:14566,6.44e-18,239;DOID:0050687,6.13e-17,143;DOID:305,4.56e-13,106 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.71e-12!138;UBERON:0003104!1.16e-11!238;UBERON:0009142!1.16e-11!238;UBERON:0003914!2.05e-11!118;UBERON:0002100!5.24e-10!216;UBERON:0000119!1.34e-08!312;UBERON:0004872!1.58e-08!84;UBERON:0000483!1.83e-08!309;UBERON:0005256!4.42e-08!143;UBERON:0001981!8.88e-08!60;UBERON:0007500!8.88e-08!60;UBERON:0004537!8.88e-08!60;UBERON:0006965!8.88e-08!60;UBERON:0001737!2.08e-07!9;UBERON:0008947!2.12e-07!38;UBERON:0003258!2.12e-07!38;UBERON:0000055!3.09e-07!69;UBERON:0000487!4.08e-07!22;UBERON:0001048!4.61e-07!168;UBERON:0000481!4.68e-07!347;UBERON:0000072!5.72e-07!46;UBERON:0002049!6.62e-07!79;UBERON:0007798!6.62e-07!79;UBERON:0004290!7.67e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;3.08e-08;33!UBERON:0001737;2.09e-07;9!UBERON:0001557;2.09e-07;9!UBERON:0000072;3.25e-07;37!UBERON:0000487;4.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.68e-13,148;UBERON:0003914,7.76e-12,117;UBERON:0002100,9.08e-12,199;UBERON:0005256,1.02e-08,122;UBERON:0004872,1.77e-08,83;UBERON:0000119,2.73e-08,309;UBERON:0003104,3.45e-08,160;UBERON:0009142,3.45e-08,160;UBERON:0000483,3.73e-08,306;UBERON:0007500,9.78e-08,59;UBERON:0001981,9.78e-08,59;UBERON:0004537,9.78e-08,59;UBERON:0006965,9.78e-08,59;UBERON:0007503,1.12e-07,78;UBERON:0001737,2.08e-07,9;UBERON:0008947,2.12e-07,38;UBERON:0003258,2.12e-07,38;UBERON:0000055,3.46e-07,68;UBERON:0000487,4.08e-07,22;UBERON:0002049,7.46e-07,78;UBERON:0007798,7.46e-07,78 | |||
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| ||
|short_description=p1@MRPS7 | |short_description=p1@MRPS7 | ||
}} | }} |
Latest revision as of 10:22, 17 September 2015
Short description: | p1@MRPS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPS7_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_uc002jnn.3_5end |
EntrezGene: | MRPS7 |
HGNC: | 14499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.94e-27 | 253 |
embryonic cell | 2.49e-20 | 250 |
mesodermal cell | 3.73e-11 | 121 |
squamous epithelial cell | 3.86e-08 | 63 |
lining cell | 1.61e-07 | 58 |
barrier cell | 1.61e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 8.68e-13 | 148 |
epithelial tube | 7.76e-12 | 117 |
trunk | 9.08e-12 | 199 |
trunk mesenchyme | 1.02e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 1.77e-08 | 83 |
cell layer | 2.73e-08 | 309 |
mesenchyme | 3.45e-08 | 160 |
entire embryonic mesenchyme | 3.45e-08 | 160 |
epithelium | 3.73e-08 | 306 |
epithelial tube open at both ends | 9.78e-08 | 59 |
blood vessel | 9.78e-08 | 59 |
blood vasculature | 9.78e-08 | 59 |
vascular cord | 9.78e-08 | 59 |
epithelial vesicle | 1.12e-07 | 78 |
larynx | 2.08e-07 | 9 |
respiratory primordium | 2.12e-07 | 38 |
endoderm of foregut | 2.12e-07 | 38 |
vessel | 3.46e-07 | 68 |
simple squamous epithelium | 4.08e-07 | 22 |
vasculature | 7.46e-07 | 78 |
vascular system | 7.46e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.72e-19 | 235 |
disease of cellular proliferation | 6.44e-18 | 239 |
cell type cancer | 6.13e-17 | 143 |
carcinoma | 4.56e-13 | 106 |