FFCP PHASE1:Hg19::chr3:191047459..191047468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_CU687992,HQ448050_5end | |association_with_transcript=0bp_to_CU687992,HQ448050_5end | ||
|cluster_id=chr3:191047459..191047468,+ | |||
|description=CAGE_peak_14_at_CCDC50_5end | |description=CAGE_peak_14_at_CCDC50_5end | ||
|id=chr3:191047459..191047468,+ | |id=chr3:191047459..191047468,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;6.43e-23;3!CL:0002593;1.38e-09;2!CL:0000451;6.16e-07;10!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.15e-23,3;CL:0002593,1.86e-09,2;CL:0000451,5.81e-07,10;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.38e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;3.16e-18;1!DOID:4549;3.16e-18;1!DOID:5861;3.16e-18;1!DOID:6496;3.16e-18;1!DOID:154;1.38e-09;2!DOID:4236;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.16e-18,1;DOID:4549,3.16e-18,1;DOID:5861,3.16e-18,1;DOID:6496,3.16e-18,1;DOID:154,1.22e-09,2;DOID:4236,1.22e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;8.01e-18;1!UBERON:0003831;8.01e-18;1!UBERON:0003898;8.01e-18;1!UBERON:0004830;8.01e-18;1!UBERON:0003830;8.01e-18;1!UBERON:0005175;8.01e-18;1!UBERON:0001774;8.01e-18;1!UBERON:0001103;8.01e-18;1!UBERON:0005090;1.38e-09;2!UBERON:0001630;1.38e-09;2!UBERON:0002456;1.38e-09;2!UBERON:0002369;5.80e-07;3!UBERON:0001235;5.80e-07;3!UBERON:0006858;5.80e-07;3!UBERON:0002418;6.14e-07;3!UBERON:0004755;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.75e-18,1;UBERON:0003831,3.75e-18,1;UBERON:0003898,3.75e-18,1;UBERON:0004830,3.75e-18,1;UBERON:0003830,3.75e-18,1;UBERON:0005175,3.75e-18,1;UBERON:0001774,3.75e-18,1;UBERON:0001103,3.75e-18,1;UBERON:0010084,3.75e-18,1;UBERON:0005090,9.46e-10,2;UBERON:0001630,9.46e-10,2;UBERON:0002456,1.86e-09,2;UBERON:0002369,5.80e-07,3;UBERON:0001235,5.80e-07,3;UBERON:0006858,5.80e-07,3;UBERON:0002418,6.14e-07,3;UBERON:0004755,6.14e-07,3 | |||
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| ||
|short_description=p14@CCDC50 | |short_description=p14@CCDC50 | ||
}} | }} |
Latest revision as of 10:34, 17 September 2015
Short description: | p14@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CU687992, HQ448050_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.15e-23 | 3 |
smooth muscle cell of the internal thoracic artery | 1.86e-09 | 2 |
dendritic cell | 5.81e-07 | 10 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.75e-18 | 1 |
respiratory system muscle | 3.75e-18 | 1 |
skeletal muscle of trunk | 3.75e-18 | 1 |
respiratory system skeletal muscle | 3.75e-18 | 1 |
thoracic segment muscle | 3.75e-18 | 1 |
chest organ | 3.75e-18 | 1 |
muscle of trunk | 3.75e-18 | 1 |
diaphragm | 3.75e-18 | 1 |
future diaphragm | 3.75e-18 | 1 |
muscle structure | 9.46e-10 | 2 |
muscle organ | 9.46e-10 | 2 |
internal thoracic artery | 1.86e-09 | 2 |
adrenal gland | 5.80e-07 | 3 |
adrenal cortex | 5.80e-07 | 3 |
adrenal/interrenal gland | 5.80e-07 | 3 |
cartilage tissue | 6.14e-07 | 3 |
skeletal tissue | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.16e-18 | 1 |
extraosseous chondrosarcoma | 3.16e-18 | 1 |
myxoid chondrosarcoma | 3.16e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 3.16e-18 | 1 |
mixed cell type cancer | 1.22e-09 | 2 |
carcinosarcoma | 1.22e-09 | 2 |